RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 TNFP01375 233 aa-1.93□□□□□ -2.72
RNU2-55P-201ENST00000411146 REEP5Q00765 189 aa-1.93□□□□□ -2.72
RNU2-55P-201ENST00000411146 DCUN1D2Q6PH85 259 aa-1.93□□□□□ -2.72
RNU2-55P-201ENST00000411146 SYNMO15061 1565 aa-1.93□□□□□ -2.72
RNU2-55P-201ENST00000411146 UHRF1BP1LA0JNW5 1464 aa-1.94□□□□□ -2.72
RNU2-55P-201ENST00000411146 ERCC6Q03468 1493 aa-1.94□□□□□ -2.72
RNU2-55P-201ENST00000411146 LRRC37A3O60309 1634 aa-1.94□□□□□ -2.72
RNU2-55P-201ENST00000411146 PITX3O75364 302 aa-1.94□□□□□ -2.72
RNU2-55P-201ENST00000411146 THEM6Q8WUY1 208 aa-1.94□□□□□ -2.72
RNU2-55P-201ENST00000411146 HOPXQ9BPY8 73 aaPredicted RBP-1.94□□□□□ -2.72
RNU2-55P-201ENST00000411146 LINC00472Q9H8W2 130 aa-1.94□□□□□ -2.72
RNU2-55P-201ENST00000411146 CASKIN1Q8WXD9 1431 aa-1.94□□□□□ -2.72
RNU2-55P-201ENST00000411146 YTHDC2Q9H6S0 1430 aaKnown RBP-1.94□□□□□ -2.72
RNU2-55P-201ENST00000411146 LAMA3Q16787 3333 aa-1.94□□□□□ -2.72
RNU2-55P-201ENST00000411146 CCDC179H3BU77 68 aa-1.95□□□□□ -2.72
RNU2-55P-201ENST00000411146 J3QLW9 94 aa-1.95□□□□□ -2.72
RNU2-55P-201ENST00000411146 S100A3P33764 101 aa-1.95□□□□□ -2.72
RNU2-55P-201ENST00000411146 CCL18P55774 89 aa-1.95□□□□□ -2.72
RNU2-55P-201ENST00000411146 PSPHP78330 225 aa-1.95□□□□□ -2.72
RNU2-55P-201ENST00000411146 CLLU1Q5K131 121 aa-1.95□□□□□ -2.72
RNU2-55P-201ENST00000411146 LINC01545Q5VT33 79 aa-1.95□□□□□ -2.72
RNU2-55P-201ENST00000411146 DEFB123Q8N688 67 aa-1.95□□□□□ -2.72
RNU2-55P-201ENST00000411146 ACACAQ13085 2346 aa-1.95□□□□□ -2.72
RNU2-55P-201ENST00000411146 A0A1W2PRE2 83 aa-1.96□□□□□ -2.72
RNU2-55P-201ENST00000411146 E7EQ34 232 aa-1.96□□□□□ -2.72
RNU2-55P-201ENST00000411146 TMEM78Q5T7P6 136 aa-1.96□□□□□ -2.72
RNU2-55P-201ENST00000411146 LSM2Q9Y333 95 aaKnown RBP-1.96□□□□□ -2.72
RNU2-55P-201ENST00000411146 ANKRD11Q6UB99 2663 aaPredicted RBP-1.96□□□□□ -2.72
RNU2-55P-201ENST00000411146 FMN2Q9NZ56 1722 aa-1.97□□□□□ -2.72
RNU2-55P-201ENST00000411146 NWD2Q9ULI1 1742 aa-1.97□□□□□ -2.72
RNU2-55P-201ENST00000411146 MYH6P13533 1939 aa-1.97□□□□□ -2.72
RNU2-55P-201ENST00000411146 MT-ND4LP03901 98 aa-1.97□□□□□ -2.72
RNU2-55P-201ENST00000411146 SERPINB1P30740 379 aa-1.97□□□□□ -2.72
RNU2-55P-201ENST00000411146 TCTAP57738 103 aa-1.97□□□□□ -2.72
RNU2-55P-201ENST00000411146 ATP11AUNQ6ZP68 121 aa-1.97□□□□□ -2.72
RNU2-55P-201ENST00000411146 CCDC32Q9BV29 185 aa-1.97□□□□□ -2.72
RNU2-55P-201ENST00000411146 MRC1P22897 1456 aa-1.97□□□□□ -2.72
RNU2-55P-201ENST00000411146 GAPVD1Q14C86 1478 aa-1.97□□□□□ -2.72
RNU2-55P-201ENST00000411146 NSD3Q9BZ95 1437 aa-1.98□□□□□ -2.73
RNU2-55P-201ENST00000411146 ZFHX3Q15911 3703 aa-1.98□□□□□ -2.73
RNU2-55P-201ENST00000411146 Q6JHZ5 121 aa-1.98□□□□□ -2.73
RNU2-55P-201ENST00000411146 CCDC115Q96NT0 180 aa-1.98□□□□□ -2.73
RNU2-55P-201ENST00000411146 BANF2Q9H503 90 aa-1.98□□□□□ -2.73
RNU2-55P-201ENST00000411146 A0A0C4DFX4 3053 aa-1.98□□□□□ -2.73
RNU2-55P-201ENST00000411146 DNHD1Q96M86 4753 aa-1.98□□□□□ -2.73
RNU2-55P-201ENST00000411146 KIAA0556O60303 1618 aa-1.99□□□□□ -2.73
RNU2-55P-201ENST00000411146 KIF21AQ7Z4S6 1674 aa-1.99□□□□□ -2.73
RNU2-55P-201ENST00000411146 TRANK1O15050 2925 aa-1.99□□□□□ -2.73
RNU2-55P-201ENST00000411146 HMGXB3Q12766 1538 aa-1.99□□□□□ -2.73
RNU2-55P-201ENST00000411146 BORCS7-ASMTA0A0B4J1R7 106 aa-1.99□□□□□ -2.73
RNU2-55P-201ENST00000411146 SMIM6P0DI80 62 aa-1.99□□□□□ -2.73
RNU2-55P-201ENST00000411146 SYNJ1O43426 1573 aa-1.99□□□□□ -2.73
RNU2-55P-201ENST00000411146 DNAH1Q9P2D7 4330 aa-1.99□□□□□ -2.73
RNU2-55P-201ENST00000411146 M0R135 149 aa-2□□□□□ -2.73
RNU2-55P-201ENST00000411146 RBP4P02753 201 aa-2□□□□□ -2.73
RNU2-55P-201ENST00000411146 HLA-DRB4P13762 266 aa-2□□□□□ -2.73
RNU2-55P-201ENST00000411146 UBE2G1P62253 170 aa-2□□□□□ -2.73
RNU2-55P-201ENST00000411146 PARVGQ9HBI0 331 aa-2□□□□□ -2.73
RNU2-55P-201ENST00000411146 RPRMQ9NS64 109 aa-2□□□□□ -2.73
RNU2-55P-201ENST00000411146 LINC00312Q9Y6C7 94 aa-2□□□□□ -2.73
RNU2-55P-201ENST00000411146 HLA-DRB4X5D2U9 266 aa-2□□□□□ -2.73
RNU2-55P-201ENST00000411146 WDR87Q6ZQQ6 2873 aa-2□□□□□ -2.73
RNU2-55P-201ENST00000411146 PKD1L2Q7Z442 2459 aa-2□□□□□ -2.73
RNU2-55P-201ENST00000411146 BTAF1O14981 1849 aa-2.01□□□□□ -2.73
RNU2-55P-201ENST00000411146 CMYA5Q8N3K9 4069 aa-2.01□□□□□ -2.73
RNU2-55P-201ENST00000411146 CTXND1A0A1B0GTU2 59 aa-2.01□□□□□ -2.73
RNU2-55P-201ENST00000411146 H0YJX3 145 aa-2.01□□□□□ -2.73
RNU2-55P-201ENST00000411146 M0R129 80 aa-2.01□□□□□ -2.73
RNU2-55P-201ENST00000411146 FAM107AO95990 144 aa-2.01□□□□□ -2.73
RNU2-55P-201ENST00000411146 MT1AP04731 61 aa-2.01□□□□□ -2.73
RNU2-55P-201ENST00000411146 TMED4Q7Z7H5 227 aa-2.01□□□□□ -2.73
RNU2-55P-201ENST00000411146 DOCK2Q92608 1830 aa-2.01□□□□□ -2.73
RNU2-55P-201ENST00000411146 EIF3AQ14152 1382 aaKnown RBP-2.01□□□□□ -2.73
RNU2-55P-201ENST00000411146 OVOS2A0A0G2JMS6 1433 aa-2.01□□□□□ -2.73
RNU2-55P-201ENST00000411146 CDK5RAP2Q96SN8 1893 aa-2.02□□□□□ -2.73
RNU2-55P-201ENST00000411146 PIRTP0C851 137 aa-2.02□□□□□ -2.73
RNU2-55P-201ENST00000411146 MIC13Q5XKP0 118 aa-2.02□□□□□ -2.73
RNU2-55P-201ENST00000411146 SPTSSBQ8NFR3 76 aa-2.02□□□□□ -2.73
RNU2-55P-201ENST00000411146 APLNQ9ULZ1 77 aa-2.02□□□□□ -2.73
RNU2-55P-201ENST00000411146 ADGRB1O14514 1584 aa-2.02□□□□□ -2.73
RNU2-55P-201ENST00000411146 PAPPA2Q9BXP8 1791 aa-2.03□□□□□ -2.73
RNU2-55P-201ENST00000411146 MGAM2Q2M2H8 2515 aa-2.03□□□□□ -2.73
RNU2-55P-201ENST00000411146 PPP1R17O96001 155 aa-2.03□□□□□ -2.73
RNU2-55P-201ENST00000411146 PAEPP09466 180 aa-2.03□□□□□ -2.73
RNU2-55P-201ENST00000411146 TMEM244Q5VVB8 128 aa-2.03□□□□□ -2.73
RNU2-55P-201ENST00000411146 SMIM4Q8WVI0 70 aa-2.03□□□□□ -2.73
RNU2-55P-201ENST00000411146 CALML5Q9NZT1 146 aa-2.03□□□□□ -2.73
RNU2-55P-201ENST00000411146 ARHGEF12Q9NZN5 1544 aa-2.03□□□□□ -2.73
RNU2-55P-201ENST00000411146 MRPS25P82663 173 aaKnown RBP-2.04□□□□□ -2.74
RNU2-55P-201ENST00000411146 TMEM170BQ5T4T1 132 aa-2.04□□□□□ -2.74
RNU2-55P-201ENST00000411146 SPANXN1Q5VSR9 72 aa-2.04□□□□□ -2.74
RNU2-55P-201ENST00000411146 PATJQ8NI35 1801 aa-2.04□□□□□ -2.74
RNU2-55P-201ENST00000411146 USP9XQ93008 2570 aaPredicted RBP-2.04□□□□□ -2.74
RNU2-55P-201ENST00000411146 TULP4Q9NRJ4 1543 aa-2.04□□□□□ -2.74
RNU2-55P-201ENST00000411146 STOML2Q9UJZ1 356 aa-2.04□□□□□ -2.74
RNU2-55P-201ENST00000411146 RIF1Q5UIP0 2472 aaKnown RBP-2.05□□□□□ -2.74
RNU2-55P-201ENST00000411146 SACSQ9NZJ4 4579 aa-2.05□□□□□ -2.74
RNU2-55P-201ENST00000411146 COL4A6Q14031 1691 aa-2.05□□□□□ -2.74
RNU2-55P-201ENST00000411146 PXDNQ92626 1479 aa-2.05□□□□□ -2.74
RNU2-55P-201ENST00000411146 SMIM24O75264 130 aa-2.05□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms