RNA–Protein interactions for RNA: ENST00000409938.5

EPHA4-203, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EPHA4, Length 3,363 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-203ENST00000409938 FAM19A3Q7Z5A8 133 aa5.68□□□□□ -1.5
EPHA4-203ENST00000409938 Q8N2B8 174 aa5.68□□□□□ -1.5
EPHA4-203ENST00000409938 LINC01356Q8N9X3 169 aa5.68□□□□□ -1.5
EPHA4-203ENST00000409938 SPTBN4Q9H254 2564 aa5.68□□□□□ -1.5
EPHA4-203ENST00000409938 IGHV3-64A0A075B6Q5 118 aa5.68□□□□□ -1.5
EPHA4-203ENST00000409938 CD28P10747 220 aa5.68□□□□□ -1.5
EPHA4-203ENST00000409938 LINC01620Q4KN68 170 aa5.68□□□□□ -1.5
EPHA4-203ENST00000409938 ZFAND6Q6FIF0 208 aa5.68□□□□□ -1.5
EPHA4-203ENST00000409938 Q6YL49 198 aa5.68□□□□□ -1.5
EPHA4-203ENST00000409938 VPREB3Q9UKI3 123 aa5.68□□□□□ -1.5
EPHA4-203ENST00000409938 AKAP6Q13023 2319 aa5.68□□□□□ -1.5
EPHA4-203ENST00000409938 TRAV8-3A0A0A6YYJ7 113 aa5.67□□□□□ -1.5
EPHA4-203ENST00000409938 C9JAW5 83 aa5.67□□□□□ -1.5
EPHA4-203ENST00000409938 TMEM262E9PQX1 116 aa5.67□□□□□ -1.5
EPHA4-203ENST00000409938 ATXN8Q156A1 80 aa5.67□□□□□ -1.5
EPHA4-203ENST00000409938 CEMP1Q6PRD7 247 aaPredicted RBP5.67□□□□□ -1.5
EPHA4-203ENST00000409938 UTP20O75691 2785 aaKnown RBP5.67□□□□□ -1.5
EPHA4-203ENST00000409938 KNCNA6PVL3 124 aa5.67□□□□□ -1.5
EPHA4-203ENST00000409938 SCGB1C2P0DMR2 95 aa5.67□□□□□ -1.5
EPHA4-203ENST00000409938 IL17DQ8TAD2 202 aa5.67□□□□□ -1.5
EPHA4-203ENST00000409938 DNAJC30Q96LL9 226 aa5.67□□□□□ -1.5
EPHA4-203ENST00000409938 CLUHP3Q96NS8 147 aa5.67□□□□□ -1.5
EPHA4-203ENST00000409938 SPXQ9BT56 116 aa5.67□□□□□ -1.5
EPHA4-203ENST00000409938 FLNCQ14315 2725 aa5.67□□□□□ -1.5
EPHA4-203ENST00000409938 TRBV10-2A0A0K0K1G8 114 aa5.67□□□□□ -1.5
EPHA4-203ENST00000409938 IGHV3-53P01767 116 aa5.67□□□□□ -1.5
EPHA4-203ENST00000409938 DEFB121Q5J5C9 76 aa5.67□□□□□ -1.5
EPHA4-203ENST00000409938 NCOR2Q9Y618 2525 aa5.67□□□□□ -1.5
EPHA4-203ENST00000409938 TGFAP01135 160 aa5.66□□□□□ -1.5
EPHA4-203ENST00000409938 TIRAPP58753 221 aa5.66□□□□□ -1.5
EPHA4-203ENST00000409938 GEMIN7Q9H840 131 aaKnown RBP5.66□□□□□ -1.5
EPHA4-203ENST00000409938 PRRC2AP48634 2157 aaKnown RBP5.66□□□□□ -1.5
EPHA4-203ENST00000409938 MAP1AP78559 2803 aaPredicted RBP5.66□□□□□ -1.5
EPHA4-203ENST00000409938 RS1O15537 224 aa5.66□□□□□ -1.5
EPHA4-203ENST00000409938 DUX5Q96PT3 197 aa5.66□□□□□ -1.5
EPHA4-203ENST00000409938 NDUFA12Q9UI09 145 aa5.66□□□□□ -1.5
EPHA4-203ENST00000409938 ZANQ9Y493 2812 aa5.66□□□□□ -1.5
EPHA4-203ENST00000409938 ADARB2-AS1A8MUL3 147 aa5.66□□□□□ -1.5
EPHA4-203ENST00000409938 PRM2P04554 102 aa5.66□□□□□ -1.5
EPHA4-203ENST00000409938 TMEM61Q8N0U2 210 aa5.66□□□□□ -1.5
EPHA4-203ENST00000409938 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.66□□□□□ -1.5
EPHA4-203ENST00000409938 ICOSQ9Y6W8 199 aa5.66□□□□□ -1.5
EPHA4-203ENST00000409938 CR1P17927 2039 aa5.65□□□□□ -1.5
EPHA4-203ENST00000409938 IGHV3-73A0A0B4J1V6 119 aa5.65□□□□□ -1.5
EPHA4-203ENST00000409938 IGLV5-39A0A0G2JS06 123 aa5.65□□□□□ -1.5
EPHA4-203ENST00000409938 NDUFA1O15239 70 aa5.65□□□□□ -1.5
EPHA4-203ENST00000409938 ZNF415Q09FC8 603 aa5.65□□□□□ -1.5
EPHA4-203ENST00000409938 C18orf65Q6ZTR6 163 aa5.65□□□□□ -1.5
EPHA4-203ENST00000409938 TNFRSF18Q9Y5U5 241 aa5.65□□□□□ -1.5
EPHA4-203ENST00000409938 CHD8Q9HCK8 2581 aa5.65□□□□□ -1.5
EPHA4-203ENST00000409938 H7C423 109 aa5.65□□□□□ -1.51
EPHA4-203ENST00000409938 SLURP1P55000 103 aa5.65□□□□□ -1.51
EPHA4-203ENST00000409938 DEFB131AP59861 70 aa5.65□□□□□ -1.51
EPHA4-203ENST00000409938 DOPEY1Q5JWR5 2465 aa5.65□□□□□ -1.51
EPHA4-203ENST00000409938 A8MZ25 164 aa5.64□□□□□ -1.51
EPHA4-203ENST00000409938 IFITM1P13164 125 aa5.64□□□□□ -1.51
EPHA4-203ENST00000409938 PPDPFQ9H3Y8 114 aa5.64□□□□□ -1.51
EPHA4-203ENST00000409938 RNASE13Q5GAN3 156 aaKnown RBP5.64□□□□□ -1.51
EPHA4-203ENST00000409938 Q6Q795 121 aa5.64□□□□□ -1.51
EPHA4-203ENST00000409938 NTN5Q8WTR8 489 aaPredicted RBP5.64□□□□□ -1.51
EPHA4-203ENST00000409938 MAP6D1Q9H9H5 199 aa5.64□□□□□ -1.51
EPHA4-203ENST00000409938 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.64□□□□□ -1.51
EPHA4-203ENST00000409938 TRAV26-1A0A087WT03 109 aa5.64□□□□□ -1.51
EPHA4-203ENST00000409938 IGKV2-29A2NJV5 120 aaPredicted RBP5.64□□□□□ -1.51
EPHA4-203ENST00000409938 H3BT86 120 aa5.64□□□□□ -1.51
EPHA4-203ENST00000409938 LST1O00453 97 aa5.64□□□□□ -1.51
EPHA4-203ENST00000409938 NHLRC4P0CG21 123 aaPredicted RBP5.64□□□□□ -1.51
EPHA4-203ENST00000409938 NRGNQ92686 78 aa5.64□□□□□ -1.51
EPHA4-203ENST00000409938 CITED2Q99967 270 aaPredicted RBP5.64□□□□□ -1.51
EPHA4-203ENST00000409938 TMEM101Q96IK0 257 aa5.63□□□□□ -1.51
EPHA4-203ENST00000409938 DUX3Q96PT4 197 aa5.63□□□□□ -1.51
EPHA4-203ENST00000409938 TEX49A0A1B0GTD5 131 aa5.63□□□□□ -1.51
EPHA4-203ENST00000409938 H7C2G1 150 aa5.63□□□□□ -1.51
EPHA4-203ENST00000409938 Q6ZSV7 163 aa5.63□□□□□ -1.51
EPHA4-203ENST00000409938 C4orf3Q8WVX3 66 aa5.63□□□□□ -1.51
EPHA4-203ENST00000409938 YAE1D1Q9NRH1 226 aa5.63□□□□□ -1.51
EPHA4-203ENST00000409938 CDKN2A-AS1Q9UH64 79 aa5.63□□□□□ -1.51
EPHA4-203ENST00000409938 CSDC2Q9Y534 153 aaKnown RBP5.63□□□□□ -1.51
EPHA4-203ENST00000409938 IGHV3OR16-12A0A075B7B8 117 aa5.63□□□□□ -1.51
EPHA4-203ENST00000409938 COX6A2Q02221 97 aa5.63□□□□□ -1.51
EPHA4-203ENST00000409938 USP9XQ93008 2570 aaPredicted RBP5.62□□□□□ -1.51
EPHA4-203ENST00000409938 CRLF1O75462 422 aa5.62□□□□□ -1.51
EPHA4-203ENST00000409938 IGHV4-31P0DP07 118 aa5.62□□□□□ -1.51
EPHA4-203ENST00000409938 IGSF10Q6WRI0 2623 aa5.62□□□□□ -1.51
EPHA4-203ENST00000409938 FAM240AA0A1B0GVK7 77 aa5.62□□□□□ -1.51
EPHA4-203ENST00000409938 DEFB136Q30KP8 78 aa5.62□□□□□ -1.51
EPHA4-203ENST00000409938 DEFB114Q30KQ6 69 aa5.62□□□□□ -1.51
EPHA4-203ENST00000409938 LINC00242Q5T6M2 205 aa5.61□□□□□ -1.51
EPHA4-203ENST00000409938 PKD1L2Q7Z442 2459 aa5.61□□□□□ -1.51
EPHA4-203ENST00000409938 NBPF19A0A087WUL8 3843 aa5.61□□□□□ -1.51
EPHA4-203ENST00000409938 TRAV4A0A0B4J268 109 aa5.61□□□□□ -1.51
EPHA4-203ENST00000409938 MRPL23Q16540 153 aaKnown RBP5.61□□□□□ -1.51
EPHA4-203ENST00000409938 Q1RN00 199 aa5.61□□□□□ -1.51
EPHA4-203ENST00000409938 UBE2WQ96B02 151 aa5.61□□□□□ -1.51
EPHA4-203ENST00000409938 PEMTQ9UBM1 199 aa5.61□□□□□ -1.51
EPHA4-203ENST00000409938 F5H768 121 aa5.61□□□□□ -1.51
EPHA4-203ENST00000409938 INSP01308 110 aa5.61□□□□□ -1.51
EPHA4-203ENST00000409938 SHISA2Q6UWI4 295 aa5.61□□□□□ -1.51
EPHA4-203ENST00000409938 ZNF625Q96I27 306 aaPredicted RBP5.61□□□□□ -1.51
EPHA4-203ENST00000409938 ZNF469Q96JG9 3925 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms