RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 TIMM21Q9BVV7 248 aa3.39□□□□□ -1.87
R3HDM1-203ENST00000409606 UQCR10Q9UDW1 63 aa3.39□□□□□ -1.87
R3HDM1-203ENST00000409606 RYR3Q15413 4870 aa3.39□□□□□ -1.87
R3HDM1-203ENST00000409606 NCR2O95944 276 aa3.39□□□□□ -1.87
R3HDM1-203ENST00000409606 CA1P00915 261 aaPredicted RBP3.39□□□□□ -1.87
R3HDM1-203ENST00000409606 GPX1P07203 203 aa3.39□□□□□ -1.87
R3HDM1-203ENST00000409606 ASIPP42127 132 aa3.39□□□□□ -1.87
R3HDM1-203ENST00000409606 EMP1P54849 157 aa3.39□□□□□ -1.87
R3HDM1-203ENST00000409606 Q6ZSN1 163 aa3.39□□□□□ -1.87
R3HDM1-203ENST00000409606 GTSCR1Q86UQ5 136 aa3.39□□□□□ -1.87
R3HDM1-203ENST00000409606 CHCHD1Q96BP2 118 aaKnown RBP3.39□□□□□ -1.87
R3HDM1-203ENST00000409606 UPK3BQ9BT76 320 aa3.39□□□□□ -1.87
R3HDM1-203ENST00000409606 MAP1LC3AQ9H492 121 aa3.39□□□□□ -1.87
R3HDM1-203ENST00000409606 TENM3Q9P273 2699 aa3.39□□□□□ -1.87
R3HDM1-203ENST00000409606 TINCRA0A1B0GVN0 87 aa3.39□□□□□ -1.87
R3HDM1-203ENST00000409606 H7C423 109 aa3.39□□□□□ -1.87
R3HDM1-203ENST00000409606 AMN1Q8IY45 258 aa3.39□□□□□ -1.87
R3HDM1-203ENST00000409606 ANAPC13Q9BS18 74 aa3.39□□□□□ -1.87
R3HDM1-203ENST00000409606 PKIGQ9Y2B9 76 aa3.39□□□□□ -1.87
R3HDM1-203ENST00000409606 ATRQ13535 2644 aa3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 GAGE12BA1L429 117 aa3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 UBE2D3P61077 147 aa3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 UBE2D2P62837 147 aa3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 FAM19A2Q8N3H0 131 aa3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 OR13C6PQ8NH95 151 aa3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 DPH3P1Q9H4G8 78 aa3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 MSRB1Q9NZV6 116 aa3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 PYGO1Q9Y3Y4 419 aa3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 COX11Q9Y6N1 276 aa3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 SONP18583 2426 aaKnown RBP3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 NBEAL1Q6ZS30 2694 aa3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 RHODO00212 210 aa3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 TCTAP57738 103 aa3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 RIGQ13278 110 aa3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 FA2HQ7L5A8 372 aa3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 SGK494Q96LW2 274 aa3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 RCHY1Q96PM5 261 aa3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 TRAV12-3A0A0B4J271 114 aa3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 NUPR1O60356 82 aa3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 GAS8-AS1O95177 125 aa3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 TSHBP01222 138 aa3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 VSIG2Q96IQ7 327 aa3.38□□□□□ -1.87
R3HDM1-203ENST00000409606 MALP21145 153 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 SRIP30626 198 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 SUMO4Q6EEV6 95 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 C11orf44Q8N8P7 122 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 KRTAP17-1Q9BYP8 105 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 MRPL16Q9NX20 251 aaKnown RBP3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 KMT2CQ8NEZ4 4911 aaKnown RBP3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 TRAV12-2A0A075B6T6 113 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 IGLV5-45A0A087WSX0 123 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 IGIPA6NJ69 53 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 MRPS36P82909 103 aaKnown RBP3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 C12orf74Q32Q52 190 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 Q6ZVH6 145 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 Q8N8P6 123 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 CHCHD7Q9BUK0 85 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 APOBP04114 4563 aaKnown RBP3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 IGHV4-28A0A0C4DH34 117 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 LOC100131303A0A0U1RQF7 123 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 LINC01549A6NIU2 74 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 EIF4EBP3O60516 100 aaPredicted RBP3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 PPP1R17O96001 155 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 APCSP02743 223 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 P0DMU3 169 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 FAM231AP0DMU4 169 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 FAM231CP0DMU5 169 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 KRTAP26-1Q6PEX3 210 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 LINC00336Q6ZUF6 198 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 AMELXQ99217 191 aa3.37□□□□□ -1.87
R3HDM1-203ENST00000409606 RPL35AP18077 110 aaKnown RBP3.36□□□□□ -1.87
R3HDM1-203ENST00000409606 FAM159AQ6UWV7 190 aa3.36□□□□□ -1.87
R3HDM1-203ENST00000409606 NEXN-AS1Q8NBZ9 246 aa3.36□□□□□ -1.87
R3HDM1-203ENST00000409606 TOMM6Q96B49 74 aa3.36□□□□□ -1.87
R3HDM1-203ENST00000409606 CELA1Q9UNI1 258 aa3.36□□□□□ -1.87
R3HDM1-203ENST00000409606 EPM2AB3EWF7 344 aa3.36□□□□□ -1.87
R3HDM1-203ENST00000409606 LINC00173Q6ZV60 143 aa3.36□□□□□ -1.87
R3HDM1-203ENST00000409606 STPG4Q8N801 248 aa3.36□□□□□ -1.87
R3HDM1-203ENST00000409606 SELENOKQ9Y6D0 94 aa3.36□□□□□ -1.87
R3HDM1-203ENST00000409606 RHOHQ15669 191 aa3.35□□□□□ -1.87
R3HDM1-203ENST00000409606 DEFB121Q5J5C9 76 aa3.35□□□□□ -1.87
R3HDM1-203ENST00000409606 H3BVH4 76 aa3.35□□□□□ -1.87
R3HDM1-203ENST00000409606 PMCHL1Q16048 86 aa3.35□□□□□ -1.87
R3HDM1-203ENST00000409606 NTM-AS1Q6ZSK4 140 aa3.35□□□□□ -1.87
R3HDM1-203ENST00000409606 LINC01561Q8N1V8 128 aa3.35□□□□□ -1.87
R3HDM1-203ENST00000409606 SPATA25Q9BR10 227 aa3.35□□□□□ -1.87
R3HDM1-203ENST00000409606 ERG28Q9UKR5 140 aa3.35□□□□□ -1.87
R3HDM1-203ENST00000409606 TRAV12-1A0A0B4J245 112 aa3.35□□□□□ -1.87
R3HDM1-203ENST00000409606 A0A1B0GUV1 79 aa3.35□□□□□ -1.87
R3HDM1-203ENST00000409606 J3QR89 54 aa3.35□□□□□ -1.87
R3HDM1-203ENST00000409606 NUDT3O95989 172 aa3.35□□□□□ -1.87
R3HDM1-203ENST00000409606 NPYP01303 97 aa3.35□□□□□ -1.87
R3HDM1-203ENST00000409606 RPL24P83731 157 aaKnown RBP3.35□□□□□ -1.87
R3HDM1-203ENST00000409606 HSD52Q0P140 79 aa3.35□□□□□ -1.87
R3HDM1-203ENST00000409606 GAGE12HA6NDE8 117 aa3.34□□□□□ -1.87
R3HDM1-203ENST00000409606 GAGE10A6NGK3 116 aa3.34□□□□□ -1.87
R3HDM1-203ENST00000409606 C3orf79P0CE67 100 aa3.34□□□□□ -1.87
R3HDM1-203ENST00000409606 RPL11P62913 178 aaKnown RBP3.34□□□□□ -1.87
R3HDM1-203ENST00000409606 TAL2Q16559 108 aa3.34□□□□□ -1.87
R3HDM1-203ENST00000409606 TEX43Q6ZNM6 134 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms