RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 TRBV6-4A0A1B0GX49 114 aa12.56□□□□□ -0.4
PCDHA13-202ENST00000409494 H0YGX0 51 aa12.56□□□□□ -0.4
PCDHA13-202ENST00000409494 MYO9AB2RTY4 2548 aa12.55□□□□□ -0.4
PCDHA13-202ENST00000409494 E9PLD3 99 aa12.55□□□□□ -0.4
PCDHA13-202ENST00000409494 AVPP01185 164 aa12.55□□□□□ -0.4
PCDHA13-202ENST00000409494 BAALCQ8WXS3 180 aa12.55□□□□□ -0.4
PCDHA13-202ENST00000409494 CITED1Q99966 193 aa12.55□□□□□ -0.4
PCDHA13-202ENST00000409494 CEP295Q9C0D2 2601 aa12.55□□□□□ -0.4
PCDHA13-202ENST00000409494 KRTAP10-9P60411 292 aa12.54□□□□□ -0.4
PCDHA13-202ENST00000409494 Q6ZTI0 123 aa12.54□□□□□ -0.4
PCDHA13-202ENST00000409494 NTN5Q8WTR8 489 aaPredicted RBP12.54□□□□□ -0.4
PCDHA13-202ENST00000409494 EML5Q05BV3 1969 aa12.54□□□□□ -0.4
PCDHA13-202ENST00000409494 CARD19Q96LW7 228 aa12.54□□□□□ -0.4
PCDHA13-202ENST00000409494 C20orf173Q96LM9 149 aa12.54□□□□□ -0.4
PCDHA13-202ENST00000409494 A0A1W2PPR1 153 aa12.53□□□□□ -0.4
PCDHA13-202ENST00000409494 HIST1H4AP62805 103 aaKnown RBP12.53□□□□□ -0.4
PCDHA13-202ENST00000409494 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.53□□□□□ -0.4
PCDHA13-202ENST00000409494 RPL39P62891 51 aaKnown RBP12.53□□□□□ -0.4
PCDHA13-202ENST00000409494 C15orf53Q8NAA6 179 aa12.53□□□□□ -0.4
PCDHA13-202ENST00000409494 KLK12Q9UKR0 248 aa12.53□□□□□ -0.4
PCDHA13-202ENST00000409494 WFDC2Q14508 124 aa12.53□□□□□ -0.4
PCDHA13-202ENST00000409494 SPAG11BQ08648 103 aa12.52□□□□□ -0.4
PCDHA13-202ENST00000409494 DEFB131BA0A096LNP1 70 aa12.52□□□□□ -0.41
PCDHA13-202ENST00000409494 TRAV10A0A0B4J240 114 aa12.52□□□□□ -0.41
PCDHA13-202ENST00000409494 ETDCA0A1B0GVM5 59 aa12.52□□□□□ -0.41
PCDHA13-202ENST00000409494 RS1O15537 224 aa12.52□□□□□ -0.41
PCDHA13-202ENST00000409494 MRGPRG-AS1Q2M3A8 158 aa12.52□□□□□ -0.41
PCDHA13-202ENST00000409494 C10orf99Q6UWK7 81 aa12.51□□□□□ -0.41
PCDHA13-202ENST00000409494 CENPFP49454 3210 aa12.51□□□□□ -0.41
PCDHA13-202ENST00000409494 A4D1N5 150 aa12.51□□□□□ -0.41
PCDHA13-202ENST00000409494 KLLNB2CW77 178 aa12.51□□□□□ -0.41
PCDHA13-202ENST00000409494 DEFB4AO15263 64 aa12.51□□□□□ -0.41
PCDHA13-202ENST00000409494 TIRAPP58753 221 aa12.5□□□□□ -0.41
PCDHA13-202ENST00000409494 ESM1Q9NQ30 184 aa12.5□□□□□ -0.41
PCDHA13-202ENST00000409494 CRIP1P50238 77 aa12.5□□□□□ -0.41
PCDHA13-202ENST00000409494 SND1-IT1Q9HBX3 110 aa12.5□□□□□ -0.41
PCDHA13-202ENST00000409494 IGLV10-54A0A075B6I4 117 aa12.5□□□□□ -0.41
PCDHA13-202ENST00000409494 TRAV26-1A0A087WT03 109 aa12.5□□□□□ -0.41
PCDHA13-202ENST00000409494 IGHV1-58A0A0C4DH39 117 aa12.5□□□□□ -0.41
PCDHA13-202ENST00000409494 UBL5Q9BZL1 73 aa12.5□□□□□ -0.41
PCDHA13-202ENST00000409494 EXPH5Q8NEV8 1989 aa12.5□□□□□ -0.41
PCDHA13-202ENST00000409494 CPAMD8Q8IZJ3 1885 aa12.5□□□□□ -0.41
PCDHA13-202ENST00000409494 TRBV6-5A0A0K0K1A5 114 aa12.49□□□□□ -0.41
PCDHA13-202ENST00000409494 DSCR8Q96T75 97 aa12.49□□□□□ -0.41
PCDHA13-202ENST00000409494 RPL18AQ02543 176 aaKnown RBP12.49□□□□□ -0.41
PCDHA13-202ENST00000409494 TP73-AS1Q9UF72 201 aa12.49□□□□□ -0.41
PCDHA13-202ENST00000409494 ABCA2Q9BZC7 2435 aa12.49□□□□□ -0.41
PCDHA13-202ENST00000409494 IGLV2-11P01706 119 aa12.48□□□□□ -0.41
PCDHA13-202ENST00000409494 MUSTN1Q8IVN3 82 aa12.48□□□□□ -0.41
PCDHA13-202ENST00000409494 SORL1Q92673 2214 aa12.48□□□□□ -0.41
PCDHA13-202ENST00000409494 TINCRA0A1B0GVN0 87 aa12.48□□□□□ -0.41
PCDHA13-202ENST00000409494 DCANP1Q8TF63 244 aa12.48□□□□□ -0.41
PCDHA13-202ENST00000409494 TEN1Q86WV5 123 aa12.47□□□□□ -0.41
PCDHA13-202ENST00000409494 TANC2Q9HCD6 1990 aa12.47□□□□□ -0.41
PCDHA13-202ENST00000409494 ADAMTS20P59510 1910 aa12.47□□□□□ -0.41
PCDHA13-202ENST00000409494 ANKRD29Q8N6D5 301 aa12.47□□□□□ -0.41
PCDHA13-202ENST00000409494 LINC00310P59036 64 aa12.46□□□□□ -0.41
PCDHA13-202ENST00000409494 CFAP126Q5VTH2 177 aa12.46□□□□□ -0.42
PCDHA13-202ENST00000409494 G3V4G9 280 aa12.45□□□□□ -0.42
PCDHA13-202ENST00000409494 FAM110AQ9BQ89 295 aa12.45□□□□□ -0.42
PCDHA13-202ENST00000409494 BBC3Q96PG8 261 aaPredicted RBP12.45□□□□□ -0.42
PCDHA13-202ENST00000409494 ORMDL1Q9P0S3 153 aa12.45□□□□□ -0.42
PCDHA13-202ENST00000409494 RBMY1FQ15415 496 aaKnown RBP12.45□□□□□ -0.42
PCDHA13-202ENST00000409494 U3KQK5 164 aa12.45□□□□□ -0.42
PCDHA13-202ENST00000409494 IGHV4-4A0A075B6R2 117 aa12.45□□□□□ -0.42
PCDHA13-202ENST00000409494 UFSP1Q6NVU6 142 aa12.44□□□□□ -0.42
PCDHA13-202ENST00000409494 Q6ZS46 218 aa12.44□□□□□ -0.42
PCDHA13-202ENST00000409494 OPRPNQ99935 248 aaPredicted RBP12.44□□□□□ -0.42
PCDHA13-202ENST00000409494 SPTBN4Q9H254 2564 aa12.44□□□□□ -0.42
PCDHA13-202ENST00000409494 IGLV1-51P01701 117 aa12.43□□□□□ -0.42
PCDHA13-202ENST00000409494 M0QY20 66 aa12.43□□□□□ -0.42
PCDHA13-202ENST00000409494 REG3AQ06141 175 aa12.43□□□□□ -0.42
PCDHA13-202ENST00000409494 RNF183Q96D59 192 aa12.43□□□□□ -0.42
PCDHA13-202ENST00000409494 PYGO1Q9Y3Y4 419 aa12.43□□□□□ -0.42
PCDHA13-202ENST00000409494 C9orf153Q5TBE3 101 aa12.43□□□□□ -0.42
PCDHA13-202ENST00000409494 NFE4Q86UQ8 179 aa12.43□□□□□ -0.42
PCDHA13-202ENST00000409494 NEXN-AS1Q8NBZ9 246 aa12.42□□□□□ -0.42
PCDHA13-202ENST00000409494 TRBV6-8A0A0A6YYG3 113 aa12.42□□□□□ -0.42
PCDHA13-202ENST00000409494 TRBV27A0A0K0K1C4 114 aa12.42□□□□□ -0.42
PCDHA13-202ENST00000409494 FOXI1Q12951 378 aa12.42□□□□□ -0.42
PCDHA13-202ENST00000409494 LINC01620Q4KN68 170 aa12.42□□□□□ -0.42
PCDHA13-202ENST00000409494 LINC00482Q8N8I6 264 aa12.41□□□□□ -0.42
PCDHA13-202ENST00000409494 C9orf85Q96MD7 179 aa12.41□□□□□ -0.42
PCDHA13-202ENST00000409494 IGHV4-28A0A0C4DH34 117 aa12.4□□□□□ -0.42
PCDHA13-202ENST00000409494 RNF185Q96GF1 192 aa12.4□□□□□ -0.42
PCDHA13-202ENST00000409494 Q6ZUT4 128 aa12.4□□□□□ -0.42
PCDHA13-202ENST00000409494 ARHGAP32A7KAX9 2087 aa12.39□□□□□ -0.43
PCDHA13-202ENST00000409494 CLUHP3Q96NS8 147 aa12.39□□□□□ -0.43
PCDHA13-202ENST00000409494 USP9XQ93008 2570 aaPredicted RBP12.39□□□□□ -0.43
PCDHA13-202ENST00000409494 BAALC-AS2P0C853 105 aa12.39□□□□□ -0.43
PCDHA13-202ENST00000409494 CRYGDP07320 174 aa12.38□□□□□ -0.43
PCDHA13-202ENST00000409494 MIAQ16674 131 aa12.38□□□□□ -0.43
PCDHA13-202ENST00000409494 CHD8Q9HCK8 2581 aa12.38□□□□□ -0.43
PCDHA13-202ENST00000409494 IGKV2D-26A0A0A0MRZ7 120 aa12.38□□□□□ -0.43
PCDHA13-202ENST00000409494 ZFYVE26Q68DK2 2539 aa12.38□□□□□ -0.43
PCDHA13-202ENST00000409494 DSCAML1Q8TD84 2053 aa12.38□□□□□ -0.43
PCDHA13-202ENST00000409494 CNFNQ9BYD5 112 aa12.38□□□□□ -0.43
PCDHA13-202ENST00000409494 FUSP35637 526 aaKnown RBP eCLIP12.38□□□□□ -0.43
PCDHA13-202ENST00000409494 RNASE3P12724 160 aaKnown RBP12.37□□□□□ -0.43
PCDHA13-202ENST00000409494 LELP1Q5T871 98 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms