RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 RBMY1BA6NDE4 496 aaKnown RBP14.31□□□□□ -0.12
COL13A1-205ENST00000398978 RBMY1EA6NEQ0 496 aaKnown RBP14.31□□□□□ -0.12
COL13A1-205ENST00000398978 RBMY1DP0C7P1 496 aaKnown RBP14.31□□□□□ -0.12
COL13A1-205ENST00000398978 C10orf126Q8N4M7 172 aa14.31□□□□□ -0.12
COL13A1-205ENST00000398978 C1QTNF4Q9BXJ3 329 aa14.31□□□□□ -0.12
COL13A1-205ENST00000398978 PRO1854Q9UHT4 67 aa14.3□□□□□ -0.12
COL13A1-205ENST00000398978 RHOHQ15669 191 aa14.3□□□□□ -0.12
COL13A1-205ENST00000398978 CFAP161Q6P656 301 aa14.3□□□□□ -0.12
COL13A1-205ENST00000398978 ZNF702PQ9H963 129 aa14.3□□□□□ -0.12
COL13A1-205ENST00000398978 ODF3Q96PU9 254 aa14.29□□□□□ -0.12
COL13A1-205ENST00000398978 SPATA25Q9BR10 227 aa14.29□□□□□ -0.12
COL13A1-205ENST00000398978 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.29□□□□□ -0.12
COL13A1-205ENST00000398978 IGKV2-29A2NJV5 120 aaPredicted RBP14.29□□□□□ -0.12
COL13A1-205ENST00000398978 LEPROTO15243 131 aa14.29□□□□□ -0.12
COL13A1-205ENST00000398978 FAM104AQ969W3 186 aa14.29□□□□□ -0.12
COL13A1-205ENST00000398978 CARD19Q96LW7 228 aa14.29□□□□□ -0.12
COL13A1-205ENST00000398978 ELANEP08246 267 aa14.28□□□□□ -0.12
COL13A1-205ENST00000398978 VPREB3Q9UKI3 123 aa14.28□□□□□ -0.12
COL13A1-205ENST00000398978 NBPF19A0A087WUL8 3843 aa14.27□□□□□ -0.12
COL13A1-205ENST00000398978 PRSS2P07478 247 aa14.27□□□□□ -0.12
COL13A1-205ENST00000398978 TRGV11A0A075B6L2 103 aa14.27□□□□□ -0.13
COL13A1-205ENST00000398978 Q1RN00 199 aa14.27□□□□□ -0.13
COL13A1-205ENST00000398978 Q6ZSV7 163 aa14.26□□□□□ -0.13
COL13A1-205ENST00000398978 TMEM61Q8N0U2 210 aa14.26□□□□□ -0.13
COL13A1-205ENST00000398978 C11orf44Q8N8P7 122 aa14.26□□□□□ -0.13
COL13A1-205ENST00000398978 IGHV3-30-3P0DP02 117 aa14.26□□□□□ -0.13
COL13A1-205ENST00000398978 TNFRSF18Q9Y5U5 241 aa14.26□□□□□ -0.13
COL13A1-205ENST00000398978 KRTAP10-9P60411 292 aa14.25□□□□□ -0.13
COL13A1-205ENST00000398978 CDIP1Q9H305 208 aa14.25□□□□□ -0.13
COL13A1-205ENST00000398978 IGHV3OR16-12A0A075B7B8 117 aa14.24□□□□□ -0.13
COL13A1-205ENST00000398978 A0A096LNT2 108 aa14.24□□□□□ -0.13
COL13A1-205ENST00000398978 A0A0J9YXY3 114 aa14.24□□□□□ -0.13
COL13A1-205ENST00000398978 SPINK8P0C7L1 97 aa14.24□□□□□ -0.13
COL13A1-205ENST00000398978 H3BMM0 161 aa14.24□□□□□ -0.13
COL13A1-205ENST00000398978 ANKRD29Q8N6D5 301 aa14.24□□□□□ -0.13
COL13A1-205ENST00000398978 C9JAW5 83 aa14.23□□□□□ -0.13
COL13A1-205ENST00000398978 MT-ATP8P03928 68 aa14.23□□□□□ -0.13
COL13A1-205ENST00000398978 GATA3P23771 443 aa14.23□□□□□ -0.13
COL13A1-205ENST00000398978 UBE2E2Q96LR5 201 aa14.23□□□□□ -0.13
COL13A1-205ENST00000398978 IGHV3-33P01772 117 aa14.23□□□□□ -0.13
COL13A1-205ENST00000398978 ADAMTSL4-AS1Q5T5F5 129 aa14.23□□□□□ -0.13
COL13A1-205ENST00000398978 TMEM263Q8WUH6 116 aaKnown RBP14.23□□□□□ -0.13
COL13A1-205ENST00000398978 TIMM21Q9BVV7 248 aa14.23□□□□□ -0.13
COL13A1-205ENST00000398978 LINC01587Q99440 93 aa14.23□□□□□ -0.13
COL13A1-205ENST00000398978 DAND5Q8N907 189 aa14.22□□□□□ -0.13
COL13A1-205ENST00000398978 USP24Q9UPU5 2620 aa14.22□□□□□ -0.13
COL13A1-205ENST00000398978 ERG28Q9UKR5 140 aa14.22□□□□□ -0.13
COL13A1-205ENST00000398978 A8MWV9 139 aa14.21□□□□□ -0.13
COL13A1-205ENST00000398978 Q6YL49 198 aa14.21□□□□□ -0.13
COL13A1-205ENST00000398978 Q6ZUT4 128 aa14.21□□□□□ -0.13
COL13A1-205ENST00000398978 LINC00467Q9BRT7 94 aa14.21□□□□□ -0.13
COL13A1-205ENST00000398978 TEN1Q86WV5 123 aa14.21□□□□□ -0.14
COL13A1-205ENST00000398978 XCL2Q9UBD3 114 aa14.2□□□□□ -0.14
COL13A1-205ENST00000398978 CR1P17927 2039 aa14.2□□□□□ -0.14
COL13A1-205ENST00000398978 XGP55808 180 aa14.19□□□□□ -0.14
COL13A1-205ENST00000398978 LYRM7Q5U5X0 104 aa14.19□□□□□ -0.14
COL13A1-205ENST00000398978 CHCHD7Q9BUK0 85 aa14.19□□□□□ -0.14
COL13A1-205ENST00000398978 M0R2P5 195 aa14.18□□□□□ -0.14
COL13A1-205ENST00000398978 ACANP16112 2415 aa14.18□□□□□ -0.14
COL13A1-205ENST00000398978 A0A0U1RRA0 63 aa14.18□□□□□ -0.14
COL13A1-205ENST00000398978 SLC25A20O43772 301 aa14.18□□□□□ -0.14
COL13A1-205ENST00000398978 PPDPFLQ8WWR9 84 aa14.18□□□□□ -0.14
COL13A1-205ENST00000398978 MTORP42345 2549 aa14.18□□□□□ -0.14
COL13A1-205ENST00000398978 A0A1W2PRX2 142 aa14.18□□□□□ -0.14
COL13A1-205ENST00000398978 TMEM89A2RUT3 159 aa14.18□□□□□ -0.14
COL13A1-205ENST00000398978 DSCR9P59020 149 aa14.18□□□□□ -0.14
COL13A1-205ENST00000398978 NDUFA12Q9UI09 145 aa14.18□□□□□ -0.14
COL13A1-205ENST00000398978 TRBV20-1A0A075B6N2 111 aa14.17□□□□□ -0.14
COL13A1-205ENST00000398978 IGHV4-31P0DP07 118 aa14.17□□□□□ -0.14
COL13A1-205ENST00000398978 DYNLRB2Q8TF09 96 aa14.17□□□□□ -0.14
COL13A1-205ENST00000398978 MAP6D1Q9H9H5 199 aa14.17□□□□□ -0.14
COL13A1-205ENST00000398978 ATP6V0E2Q8NHE4 81 aa14.16□□□□□ -0.14
COL13A1-205ENST00000398978 LITAFQ99732 161 aa14.16□□□□□ -0.14
COL13A1-205ENST00000398978 IGHV3-53P01767 116 aa14.16□□□□□ -0.14
COL13A1-205ENST00000398978 MRPS36P82909 103 aaKnown RBP14.16□□□□□ -0.14
COL13A1-205ENST00000398978 UBE2D4Q9Y2X8 147 aa14.16□□□□□ -0.14
COL13A1-205ENST00000398978 ITPR3Q14573 2671 aa14.16□□□□□ -0.14
COL13A1-205ENST00000398978 NDUFA7O95182 113 aa14.16□□□□□ -0.14
COL13A1-205ENST00000398978 ZNF625Q96I27 306 aaPredicted RBP14.16□□□□□ -0.14
COL13A1-205ENST00000398978 APCP25054 2843 aa14.15□□□□□ -0.14
COL13A1-205ENST00000398978 SETXQ7Z333 2677 aaKnown RBP14.14□□□□□ -0.15
COL13A1-205ENST00000398978 TRIAP1O43715 76 aa14.14□□□□□ -0.15
COL13A1-205ENST00000398978 ZNF415Q09FC8 603 aa14.14□□□□□ -0.15
COL13A1-205ENST00000398978 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.14□□□□□ -0.15
COL13A1-205ENST00000398978 IGHV1-58A0A0C4DH39 117 aa14.14□□□□□ -0.15
COL13A1-205ENST00000398978 CDKN2A-AS1Q9UH64 79 aa14.14□□□□□ -0.15
COL13A1-205ENST00000398978 CKS1BP61024 79 aa14.13□□□□□ -0.15
COL13A1-205ENST00000398978 PYGO1Q9Y3Y4 419 aa14.13□□□□□ -0.15
COL13A1-205ENST00000398978 J3QLI3 93 aa14.13□□□□□ -0.15
COL13A1-205ENST00000398978 C11orf72Q8NBR9 251 aa14.13□□□□□ -0.15
COL13A1-205ENST00000398978 NTN5Q8WTR8 489 aaPredicted RBP14.13□□□□□ -0.15
COL13A1-205ENST00000398978 FLNAP21333 2647 aaKnown RBP14.13□□□□□ -0.15
COL13A1-205ENST00000398978 A0A0B4J2C4 111 aa14.12□□□□□ -0.15
COL13A1-205ENST00000398978 SCGB1A1P11684 91 aa14.12□□□□□ -0.15
COL13A1-205ENST00000398978 VSIG2Q96IQ7 327 aa14.12□□□□□ -0.15
COL13A1-205ENST00000398978 GEMIN7Q9H840 131 aaKnown RBP14.12□□□□□ -0.15
COL13A1-205ENST00000398978 COX6A2Q02221 97 aa14.11□□□□□ -0.15
COL13A1-205ENST00000398978 SBSPONQ8IVN8 264 aa14.11□□□□□ -0.15
COL13A1-205ENST00000398978 CRYBA4P53673 196 aa14.1□□□□□ -0.15
COL13A1-205ENST00000398978 CLEC2BQ92478 149 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 253.7 ms