RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 SHISA2Q6UWI4 295 aa12.21□□□□□ -0.45
PCDHA12-201ENST00000398631 TP53TG3Q9ULZ0 132 aa12.21□□□□□ -0.45
PCDHA12-201ENST00000398631 LINC00322Q6ZN03 302 aaPredicted RBP12.21□□□□□ -0.46
PCDHA12-201ENST00000398631 Q6ZUT4 128 aa12.21□□□□□ -0.46
PCDHA12-201ENST00000398631 ZNF106Q9H2Y7 1883 aaKnown RBP12.21□□□□□ -0.46
PCDHA12-201ENST00000398631 B5MCH6 92 aa12.21□□□□□ -0.46
PCDHA12-201ENST00000398631 NCR3O14931 201 aa12.21□□□□□ -0.46
PCDHA12-201ENST00000398631 IGLV2-8P01709 118 aa12.21□□□□□ -0.46
PCDHA12-201ENST00000398631 IGLC6P0CF74 106 aa12.21□□□□□ -0.46
PCDHA12-201ENST00000398631 ZNF295-AS1Q8N0V1 137 aa12.21□□□□□ -0.46
PCDHA12-201ENST00000398631 MLST8Q9BVC4 326 aa12.2□□□□□ -0.46
PCDHA12-201ENST00000398631 ZFAND3Q9H8U3 227 aa12.2□□□□□ -0.46
PCDHA12-201ENST00000398631 DIRC1Q969H9 104 aa12.2□□□□□ -0.46
PCDHA12-201ENST00000398631 ALPK3Q96L96 1907 aa12.2□□□□□ -0.46
PCDHA12-201ENST00000398631 CEMP1Q6PRD7 247 aaPredicted RBP12.19□□□□□ -0.46
PCDHA12-201ENST00000398631 PRRC2AP48634 2157 aaKnown RBP12.19□□□□□ -0.46
PCDHA12-201ENST00000398631 NDUFB1O75438 58 aa12.19□□□□□ -0.46
PCDHA12-201ENST00000398631 A0A0B4J2C4 111 aa12.19□□□□□ -0.46
PCDHA12-201ENST00000398631 TLN2Q9Y4G6 2542 aa12.19□□□□□ -0.46
PCDHA12-201ENST00000398631 P0DMU3 169 aa12.18□□□□□ -0.46
PCDHA12-201ENST00000398631 FAM231AP0DMU4 169 aa12.18□□□□□ -0.46
PCDHA12-201ENST00000398631 FAM231CP0DMU5 169 aa12.18□□□□□ -0.46
PCDHA12-201ENST00000398631 SPATA12Q7Z6I5 190 aa12.18□□□□□ -0.46
PCDHA12-201ENST00000398631 LECT2O14960 151 aa12.18□□□□□ -0.46
PCDHA12-201ENST00000398631 RNASE8Q8TDE3 154 aaKnown RBP12.18□□□□□ -0.46
PCDHA12-201ENST00000398631 ATOX1O00244 68 aa12.18□□□□□ -0.46
PCDHA12-201ENST00000398631 IGHV4-28A0A0C4DH34 117 aa12.18□□□□□ -0.46
PCDHA12-201ENST00000398631 RBM3P98179 157 aaKnown RBP12.18□□□□□ -0.46
PCDHA12-201ENST00000398631 C14orf177Q52M58 125 aa12.18□□□□□ -0.46
PCDHA12-201ENST00000398631 WFDC2Q14508 124 aa12.17□□□□□ -0.46
PCDHA12-201ENST00000398631 H3BT86 120 aa12.17□□□□□ -0.46
PCDHA12-201ENST00000398631 PSMG3-AS1Q96PY0 264 aa12.16□□□□□ -0.46
PCDHA12-201ENST00000398631 KIAA1549LQ6ZVL6 1849 aa12.16□□□□□ -0.46
PCDHA12-201ENST00000398631 CHD8Q9HCK8 2581 aa12.16□□□□□ -0.46
PCDHA12-201ENST00000398631 HILS1P60008 231 aa12.16□□□□□ -0.46
PCDHA12-201ENST00000398631 C20orf173Q96LM9 149 aa12.16□□□□□ -0.46
PCDHA12-201ENST00000398631 FOXI1Q12951 378 aa12.16□□□□□ -0.46
PCDHA12-201ENST00000398631 NREPQ16612 68 aa12.16□□□□□ -0.46
PCDHA12-201ENST00000398631 C10orf99Q6UWK7 81 aa12.16□□□□□ -0.46
PCDHA12-201ENST00000398631 LINC00269Q8N2A0 174 aa12.16□□□□□ -0.46
PCDHA12-201ENST00000398631 ZFAND2AQ8N6M9 145 aa12.16□□□□□ -0.46
PCDHA12-201ENST00000398631 ABCA12Q86UK0 2595 aa12.16□□□□□ -0.46
PCDHA12-201ENST00000398631 DEFB131BA0A096LNP1 70 aa12.15□□□□□ -0.46
PCDHA12-201ENST00000398631 JMJD7-PLA2G4BH0Y9G9 81 aa12.15□□□□□ -0.46
PCDHA12-201ENST00000398631 REG3AQ06141 175 aa12.15□□□□□ -0.46
PCDHA12-201ENST00000398631 SPATA25Q9BR10 227 aa12.15□□□□□ -0.46
PCDHA12-201ENST00000398631 USP9XQ93008 2570 aaPredicted RBP12.15□□□□□ -0.46
PCDHA12-201ENST00000398631 LY6G6DO95868 133 aa12.15□□□□□ -0.46
PCDHA12-201ENST00000398631 C4orf48Q5BLP8 95 aa12.15□□□□□ -0.46
PCDHA12-201ENST00000398631 TRBV10-2A0A0K0K1G8 114 aa12.14□□□□□ -0.47
PCDHA12-201ENST00000398631 C10orf142B7Z368 130 aa12.14□□□□□ -0.47
PCDHA12-201ENST00000398631 UFSP1Q6NVU6 142 aa12.14□□□□□ -0.47
PCDHA12-201ENST00000398631 CEP295Q9C0D2 2601 aa12.14□□□□□ -0.47
PCDHA12-201ENST00000398631 COL4A4P53420 1690 aaPredicted RBP12.14□□□□□ -0.47
PCDHA12-201ENST00000398631 MIFP14174 115 aa12.14□□□□□ -0.47
PCDHA12-201ENST00000398631 HIGD2BQ4VC39 106 aa12.14□□□□□ -0.47
PCDHA12-201ENST00000398631 PSMB8P28062 276 aa12.14□□□□□ -0.47
PCDHA12-201ENST00000398631 LINC00482Q8N8I6 264 aa12.13□□□□□ -0.47
PCDHA12-201ENST00000398631 Q8N6K4 173 aa12.13□□□□□ -0.47
PCDHA12-201ENST00000398631 LINC01006Q8NI28 216 aa12.13□□□□□ -0.47
PCDHA12-201ENST00000398631 ZNF702PQ9H963 129 aa12.13□□□□□ -0.47
PCDHA12-201ENST00000398631 IGKV2-24A0A0C4DH68 120 aa12.12□□□□□ -0.47
PCDHA12-201ENST00000398631 SS18L2Q9UHA2 77 aa12.12□□□□□ -0.47
PCDHA12-201ENST00000398631 MBD6Q96DN6 1003 aa12.12□□□□□ -0.47
PCDHA12-201ENST00000398631 G3V4G9 280 aa12.11□□□□□ -0.47
PCDHA12-201ENST00000398631 RNF183Q96D59 192 aa12.11□□□□□ -0.47
PCDHA12-201ENST00000398631 LINC00467Q9BRT7 94 aa12.11□□□□□ -0.47
PCDHA12-201ENST00000398631 H7C423 109 aa12.1□□□□□ -0.47
PCDHA12-201ENST00000398631 CHCHD10Q8WYQ3 142 aaPredicted RBP12.1□□□□□ -0.47
PCDHA12-201ENST00000398631 MIAQ16674 131 aa12.1□□□□□ -0.47
PCDHA12-201ENST00000398631 GDF5OSQ5U4N7 250 aa12.1□□□□□ -0.47
PCDHA12-201ENST00000398631 NFE4Q86UQ8 179 aa12.1□□□□□ -0.47
PCDHA12-201ENST00000398631 CRYGDP07320 174 aa12.1□□□□□ -0.47
PCDHA12-201ENST00000398631 COX7BP24311 80 aa12.1□□□□□ -0.47
PCDHA12-201ENST00000398631 FAM236AA0A1B0GUQ0 79 aa12.09□□□□□ -0.47
PCDHA12-201ENST00000398631 FAM236BA0A1B0GV22 79 aa12.09□□□□□ -0.47
PCDHA12-201ENST00000398631 NEXN-AS1Q8NBZ9 246 aa12.09□□□□□ -0.47
PCDHA12-201ENST00000398631 CLEC2BQ92478 149 aa12.09□□□□□ -0.47
PCDHA12-201ENST00000398631 TRBV6-4A0A1B0GX49 114 aa12.09□□□□□ -0.47
PCDHA12-201ENST00000398631 A0A1B0GX51 115 aa12.09□□□□□ -0.47
PCDHA12-201ENST00000398631 FAM110AQ9BQ89 295 aa12.09□□□□□ -0.47
PCDHA12-201ENST00000398631 CDKN2A-AS1Q9UH64 79 aa12.08□□□□□ -0.48
PCDHA12-201ENST00000398631 CFAP126Q5VTH2 177 aa12.08□□□□□ -0.48
PCDHA12-201ENST00000398631 TMEM256-PLSCR3K7ERE1 68 aa12.08□□□□□ -0.48
PCDHA12-201ENST00000398631 SMIM20Q8N5G0 67 aa12.08□□□□□ -0.48
PCDHA12-201ENST00000398631 A0A0J9YXY3 114 aa12.07□□□□□ -0.48
PCDHA12-201ENST00000398631 IGKV3D-7A0A0C4DH55 119 aa12.07□□□□□ -0.48
PCDHA12-201ENST00000398631 B9D2Q9BPU9 175 aa12.07□□□□□ -0.48
PCDHA12-201ENST00000398631 M0QY20 66 aa12.07□□□□□ -0.48
PCDHA12-201ENST00000398631 CEP192Q8TEP8 1941 aa12.07□□□□□ -0.48
PCDHA12-201ENST00000398631 ANKRD11Q6UB99 2663 aaPredicted RBP12.06□□□□□ -0.48
PCDHA12-201ENST00000398631 CRIP1P50238 77 aa12.06□□□□□ -0.48
PCDHA12-201ENST00000398631 WDR87Q6ZQQ6 2873 aa12.06□□□□□ -0.48
PCDHA12-201ENST00000398631 TRBV6-8A0A0A6YYG3 113 aa12.06□□□□□ -0.48
PCDHA12-201ENST00000398631 MP68P56378 58 aa12.06□□□□□ -0.48
PCDHA12-201ENST00000398631 SETD2Q9BYW2 2564 aaPredicted RBP12.06□□□□□ -0.48
PCDHA12-201ENST00000398631 KIAA1549Q9HCM3 1950 aa12.06□□□□□ -0.48
PCDHA12-201ENST00000398631 USP9YO00507 2555 aaPredicted RBP12.05□□□□□ -0.48
PCDHA12-201ENST00000398631 IGLV4-3A0A075B6K6 122 aa12.05□□□□□ -0.48
PCDHA12-201ENST00000398631 PDE6GP18545 87 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms