RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 C9orf153Q5TBE3 101 aa8.29□□□□□ -1.08
CSGALNACT1-202ENST00000397998 TRAV4A0A0B4J268 109 aa8.29□□□□□ -1.08
CSGALNACT1-202ENST00000397998 TRGV4A0A0C4DH28 118 aa8.29□□□□□ -1.08
CSGALNACT1-202ENST00000397998 K7EMT4 169 aa8.29□□□□□ -1.08
CSGALNACT1-202ENST00000397998 LGALS9O00182 355 aa8.29□□□□□ -1.08
CSGALNACT1-202ENST00000397998 CRYGDP07320 174 aa8.29□□□□□ -1.08
CSGALNACT1-202ENST00000397998 SMCPP49901 116 aaPredicted RBP8.29□□□□□ -1.08
CSGALNACT1-202ENST00000397998 NDUFV3P56181 108 aaKnown RBP8.29□□□□□ -1.08
CSGALNACT1-202ENST00000397998 CFHR3Q02985 330 aa8.29□□□□□ -1.08
CSGALNACT1-202ENST00000397998 PRO0461Q9UI25 63 aa8.29□□□□□ -1.08
CSGALNACT1-202ENST00000397998 C10orf99Q6UWK7 81 aa8.29□□□□□ -1.08
CSGALNACT1-202ENST00000397998 APRG1Q8IVJ8 170 aa8.28□□□□□ -1.08
CSGALNACT1-202ENST00000397998 CDIP1Q9H305 208 aa8.28□□□□□ -1.08
CSGALNACT1-202ENST00000397998 EDA2RQ9HAV5 297 aa8.28□□□□□ -1.08
CSGALNACT1-202ENST00000397998 SPANXA1Q9NS26 97 aa8.28□□□□□ -1.08
CSGALNACT1-202ENST00000397998 ZNF580Q9UK33 172 aa8.28□□□□□ -1.08
CSGALNACT1-202ENST00000397998 KLLNB2CW77 178 aa8.27□□□□□ -1.09
CSGALNACT1-202ENST00000397998 PRM2P04554 102 aa8.27□□□□□ -1.09
CSGALNACT1-202ENST00000397998 SLURP1P55000 103 aa8.27□□□□□ -1.09
CSGALNACT1-202ENST00000397998 A0A1W2PPR1 153 aa8.27□□□□□ -1.09
CSGALNACT1-202ENST00000397998 TSHBP01222 138 aa8.27□□□□□ -1.09
CSGALNACT1-202ENST00000397998 PFN2P35080 140 aa8.27□□□□□ -1.09
CSGALNACT1-202ENST00000397998 NSUN5P1Q3KNT7 163 aa8.27□□□□□ -1.09
CSGALNACT1-202ENST00000397998 A6NDX4 124 aa8.27□□□□□ -1.09
CSGALNACT1-202ENST00000397998 H3BT86 120 aa8.27□□□□□ -1.09
CSGALNACT1-202ENST00000397998 BAALC-AS2P0C853 105 aa8.27□□□□□ -1.09
CSGALNACT1-202ENST00000397998 NBL1P41271 181 aa8.27□□□□□ -1.09
CSGALNACT1-202ENST00000397998 COX6B1P14854 86 aa8.26□□□□□ -1.09
CSGALNACT1-202ENST00000397998 HERVK_113P63121 156 aa8.26□□□□□ -1.09
CSGALNACT1-202ENST00000397998 TRBV6-5A0A0K0K1A5 114 aa8.26□□□□□ -1.09
CSGALNACT1-202ENST00000397998 RBMY1BA6NDE4 496 aaKnown RBP8.26□□□□□ -1.09
CSGALNACT1-202ENST00000397998 RBMY1EA6NEQ0 496 aaKnown RBP8.26□□□□□ -1.09
CSGALNACT1-202ENST00000397998 RBMY1DP0C7P1 496 aaKnown RBP8.26□□□□□ -1.09
CSGALNACT1-202ENST00000397998 RBMY1A1P0DJD3 496 aaKnown RBP8.26□□□□□ -1.09
CSGALNACT1-202ENST00000397998 RBMY1CP0DJD4 496 aa8.26□□□□□ -1.09
CSGALNACT1-202ENST00000397998 CDKN2A-AS1Q9UH64 79 aa8.26□□□□□ -1.09
CSGALNACT1-202ENST00000397998 FAM236AA0A1B0GUQ0 79 aa8.26□□□□□ -1.09
CSGALNACT1-202ENST00000397998 FAM236BA0A1B0GV22 79 aa8.26□□□□□ -1.09
CSGALNACT1-202ENST00000397998 MIAQ16674 131 aa8.26□□□□□ -1.09
CSGALNACT1-202ENST00000397998 RPL32P62910 135 aaKnown RBP8.25□□□□□ -1.09
CSGALNACT1-202ENST00000397998 TMEM263Q8WUH6 116 aaKnown RBP8.25□□□□□ -1.09
CSGALNACT1-202ENST00000397998 NOTCH2Q04721 2471 aa8.25□□□□□ -1.09
CSGALNACT1-202ENST00000397998 RPL35AP18077 110 aaKnown RBP8.25□□□□□ -1.09
CSGALNACT1-202ENST00000397998 C10orf105Q8TEF2 133 aa8.25□□□□□ -1.09
CSGALNACT1-202ENST00000397998 NRGNQ92686 78 aa8.25□□□□□ -1.09
CSGALNACT1-202ENST00000397998 K7EQG2 157 aa8.24□□□□□ -1.09
CSGALNACT1-202ENST00000397998 Q6ZSV7 163 aa8.24□□□□□ -1.09
CSGALNACT1-202ENST00000397998 LINC01356Q8N9X3 169 aa8.24□□□□□ -1.09
CSGALNACT1-202ENST00000397998 RNF223E7ERA6 249 aa8.24□□□□□ -1.09
CSGALNACT1-202ENST00000397998 C19orf84I3L1E1 186 aa8.24□□□□□ -1.09
CSGALNACT1-202ENST00000397998 HIST1H4AP62805 103 aaKnown RBP8.24□□□□□ -1.09
CSGALNACT1-202ENST00000397998 VSIG2Q96IQ7 327 aa8.24□□□□□ -1.09
CSGALNACT1-202ENST00000397998 ADGRG4Q8IZF6 3080 aa8.24□□□□□ -1.09
CSGALNACT1-202ENST00000397998 PRRC2AP48634 2157 aaKnown RBP8.24□□□□□ -1.09
CSGALNACT1-202ENST00000397998 TRBV30A0A0K0K1B3 111 aa8.24□□□□□ -1.09
CSGALNACT1-202ENST00000397998 INAFM2P0DMQ5 153 aa8.24□□□□□ -1.09
CSGALNACT1-202ENST00000397998 C6orf226Q5I0X4 101 aa8.24□□□□□ -1.09
CSGALNACT1-202ENST00000397998 ELANEP08246 267 aa8.23□□□□□ -1.09
CSGALNACT1-202ENST00000397998 WDFY3Q8IZQ1 3526 aa8.23□□□□□ -1.09
CSGALNACT1-202ENST00000397998 DCANP1Q8TF63 244 aa8.23□□□□□ -1.09
CSGALNACT1-202ENST00000397998 LINC00467Q9BRT7 94 aa8.23□□□□□ -1.09
CSGALNACT1-202ENST00000397998 SOCS3O14543 225 aa8.22□□□□□ -1.09
CSGALNACT1-202ENST00000397998 CCDC179H3BU77 68 aa8.22□□□□□ -1.09
CSGALNACT1-202ENST00000397998 POLQO75417 2590 aa8.22□□□□□ -1.09
CSGALNACT1-202ENST00000397998 GATA3P23771 443 aa8.22□□□□□ -1.09
CSGALNACT1-202ENST00000397998 TMEM61Q8N0U2 210 aa8.22□□□□□ -1.09
CSGALNACT1-202ENST00000397998 C9orf85Q96MD7 179 aa8.22□□□□□ -1.09
CSGALNACT1-202ENST00000397998 TMEM243Q9BU79 118 aa8.22□□□□□ -1.09
CSGALNACT1-202ENST00000397998 MYO18BQ8IUG5 2567 aa8.22□□□□□ -1.09
CSGALNACT1-202ENST00000397998 KIF25-AS1Q9Y6Z4 181 aa8.21□□□□□ -1.09
CSGALNACT1-202ENST00000397998 LOC400499M0QZD8 3231 aa8.21□□□□□ -1.1
CSGALNACT1-202ENST00000397998 TINCRA0A1B0GVN0 87 aa8.21□□□□□ -1.1
CSGALNACT1-202ENST00000397998 TMEM86BQ8N661 226 aa8.21□□□□□ -1.1
CSGALNACT1-202ENST00000397998 DSCR9P59020 149 aa8.2□□□□□ -1.1
CSGALNACT1-202ENST00000397998 Q9HAA7 133 aa8.2□□□□□ -1.1
CSGALNACT1-202ENST00000397998 FN1P02751 2386 aaKnown RBP8.2□□□□□ -1.1
CSGALNACT1-202ENST00000397998 ABCA2Q9BZC7 2435 aa8.2□□□□□ -1.1
CSGALNACT1-202ENST00000397998 CRLF1O75462 422 aa8.2□□□□□ -1.1
CSGALNACT1-202ENST00000397998 VPREB3Q9UKI3 123 aa8.2□□□□□ -1.1
CSGALNACT1-202ENST00000397998 H7C423 109 aa8.2□□□□□ -1.1
CSGALNACT1-202ENST00000397998 NXPH4O95158 308 aa8.2□□□□□ -1.1
CSGALNACT1-202ENST00000397998 DEFB130BP0DP73 79 aa8.2□□□□□ -1.1
CSGALNACT1-202ENST00000397998 DEFB130AP0DP74 79 aa8.2□□□□□ -1.1
CSGALNACT1-202ENST00000397998 LINC00315P59091 139 aa8.2□□□□□ -1.1
CSGALNACT1-202ENST00000397998 NOP10Q9NPE3 64 aaKnown RBP8.2□□□□□ -1.1
CSGALNACT1-202ENST00000397998 PIEZO1Q92508 2521 aa8.19□□□□□ -1.1
CSGALNACT1-202ENST00000397998 TRAV13-2A0A0B4J235 113 aa8.19□□□□□ -1.1
CSGALNACT1-202ENST00000397998 POM121L12Q8N7R1 296 aa8.19□□□□□ -1.1
CSGALNACT1-202ENST00000397998 ODF3Q96PU9 254 aa8.19□□□□□ -1.1
CSGALNACT1-202ENST00000397998 ADAMTSL4-AS1Q5T5F5 129 aa8.19□□□□□ -1.1
CSGALNACT1-202ENST00000397998 ACYP1P07311 99 aa8.19□□□□□ -1.1
CSGALNACT1-202ENST00000397998 C5orf38Q86SI9 138 aa8.19□□□□□ -1.1
CSGALNACT1-202ENST00000397998 CFAP161Q6P656 301 aa8.18□□□□□ -1.1
CSGALNACT1-202ENST00000397998 DNAJC30Q96LL9 226 aa8.18□□□□□ -1.1
CSGALNACT1-202ENST00000397998 SND1-IT1Q9HBX3 110 aa8.18□□□□□ -1.1
CSGALNACT1-202ENST00000397998 HERV-K104P63124 156 aa8.18□□□□□ -1.1
CSGALNACT1-202ENST00000397998 HIST2H2BDQ6DRA6 164 aa8.18□□□□□ -1.1
CSGALNACT1-202ENST00000397998 ZNF575Q86XF7 245 aa8.18□□□□□ -1.1
CSGALNACT1-202ENST00000397998 LINC00308Q8TCZ7 52 aa8.18□□□□□ -1.1
CSGALNACT1-202ENST00000397998 PYGO1Q9Y3Y4 419 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms