RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 IGKV2D-26A0A0A0MRZ7 120 aa8.51□□□□□ -1.05
TTC28-201ENST00000397906 PROK1P58294 105 aa8.51□□□□□ -1.05
TTC28-201ENST00000397906 NPSP0C0P6 89 aa8.51□□□□□ -1.05
TTC28-201ENST00000397906 A0A0J9YWU9 116 aa8.51□□□□□ -1.05
TTC28-201ENST00000397906 K7EQG2 157 aa8.51□□□□□ -1.05
TTC28-201ENST00000397906 FRMD6-AS1P0C7T7 363 aa8.51□□□□□ -1.05
TTC28-201ENST00000397906 NANOS2P60321 138 aaKnown RBP8.51□□□□□ -1.05
TTC28-201ENST00000397906 SMIM9A6NGZ8 99 aa8.51□□□□□ -1.05
TTC28-201ENST00000397906 MIFP14174 115 aa8.51□□□□□ -1.05
TTC28-201ENST00000397906 C7orf33Q8WU49 177 aa8.51□□□□□ -1.05
TTC28-201ENST00000397906 BBC3Q96PG8 261 aaPredicted RBP8.51□□□□□ -1.05
TTC28-201ENST00000397906 C20orf203Q8NBC4 194 aa8.5□□□□□ -1.05
TTC28-201ENST00000397906 COX7BP24311 80 aa8.5□□□□□ -1.05
TTC28-201ENST00000397906 CDPF1Q6NVV7 123 aa8.5□□□□□ -1.05
TTC28-201ENST00000397906 TRAV10A0A0B4J240 114 aa8.5□□□□□ -1.05
TTC28-201ENST00000397906 A0A1B0GX51 115 aa8.5□□□□□ -1.05
TTC28-201ENST00000397906 RBM3P98179 157 aaKnown RBP8.5□□□□□ -1.05
TTC28-201ENST00000397906 UBE2D1P51668 147 aa8.5□□□□□ -1.05
TTC28-201ENST00000397906 FOXI1Q12951 378 aa8.5□□□□□ -1.05
TTC28-201ENST00000397906 IGKV4-1P06312 121 aa8.5□□□□□ -1.05
TTC28-201ENST00000397906 IGHV1-58A0A0C4DH39 117 aa8.49□□□□□ -1.05
TTC28-201ENST00000397906 KRTAP10-9P60411 292 aa8.49□□□□□ -1.05
TTC28-201ENST00000397906 DCANP1Q8TF63 244 aa8.49□□□□□ -1.05
TTC28-201ENST00000397906 PSMB8P28062 276 aa8.49□□□□□ -1.05
TTC28-201ENST00000397906 XAGE1AQ9HD64 81 aa8.49□□□□□ -1.05
TTC28-201ENST00000397906 LINC00526Q96FQ7 95 aa8.49□□□□□ -1.05
TTC28-201ENST00000397906 PRM2P04554 102 aa8.49□□□□□ -1.05
TTC28-201ENST00000397906 HRCT1Q6UXD1 115 aa8.49□□□□□ -1.05
TTC28-201ENST00000397906 PTPN13Q12923 2485 aa8.48□□□□□ -1.05
TTC28-201ENST00000397906 IGKV2-28A0A075B6P5 120 aa8.48□□□□□ -1.05
TTC28-201ENST00000397906 IGKV2D-28P01615 120 aa8.48□□□□□ -1.05
TTC28-201ENST00000397906 CFAP126Q5VTH2 177 aa8.48□□□□□ -1.05
TTC28-201ENST00000397906 Q8N976 141 aa8.48□□□□□ -1.05
TTC28-201ENST00000397906 NEXN-AS1Q8NBZ9 246 aa8.48□□□□□ -1.05
TTC28-201ENST00000397906 PCNX3Q9H6A9 2034 aa8.48□□□□□ -1.05
TTC28-201ENST00000397906 CUL9Q8IWT3 2517 aa8.48□□□□□ -1.05
TTC28-201ENST00000397906 TDRG1Q3Y452 100 aa8.48□□□□□ -1.05
TTC28-201ENST00000397906 CLUHP3Q96NS8 147 aa8.48□□□□□ -1.05
TTC28-201ENST00000397906 LYPD6Q86Y78 171 aa8.48□□□□□ -1.05
TTC28-201ENST00000397906 MP68P56378 58 aa8.47□□□□□ -1.05
TTC28-201ENST00000397906 FXYD2P54710 66 aa8.47□□□□□ -1.05
TTC28-201ENST00000397906 LINC01545Q5VT33 79 aa8.47□□□□□ -1.05
TTC28-201ENST00000397906 PSMG3-AS1Q96PY0 264 aa8.47□□□□□ -1.05
TTC28-201ENST00000397906 LOC100131303A0A0U1RQF7 123 aa8.47□□□□□ -1.05
TTC28-201ENST00000397906 EP400Q96L91 3159 aa8.46□□□□□ -1.05
TTC28-201ENST00000397906 LY6LH3BQJ8 138 aa8.46□□□□□ -1.05
TTC28-201ENST00000397906 CITED1Q99966 193 aa8.46□□□□□ -1.05
TTC28-201ENST00000397906 PPDPFQ9H3Y8 114 aa8.46□□□□□ -1.05
TTC28-201ENST00000397906 E9PLD3 99 aa8.46□□□□□ -1.05
TTC28-201ENST00000397906 KPRPQ5T749 579 aaPredicted RBP8.46□□□□□ -1.05
TTC28-201ENST00000397906 LINC00322Q6ZN03 302 aaPredicted RBP8.46□□□□□ -1.05
TTC28-201ENST00000397906 BRWD1-AS2P59051 145 aa8.46□□□□□ -1.06
TTC28-201ENST00000397906 Q6ZPA2 131 aa8.46□□□□□ -1.06
TTC28-201ENST00000397906 ODF1Q14990 250 aa8.45□□□□□ -1.06
TTC28-201ENST00000397906 TRBV6-8A0A0A6YYG3 113 aa8.45□□□□□ -1.06
TTC28-201ENST00000397906 C9orf85Q96MD7 179 aa8.45□□□□□ -1.06
TTC28-201ENST00000397906 RETNQ9HD89 108 aa8.45□□□□□ -1.06
TTC28-201ENST00000397906 WNK1Q9H4A3 2382 aa8.45□□□□□ -1.06
TTC28-201ENST00000397906 DSCAML1Q8TD84 2053 aa8.45□□□□□ -1.06
TTC28-201ENST00000397906 UFSP1Q6NVU6 142 aa8.45□□□□□ -1.06
TTC28-201ENST00000397906 ODF3Q96PU9 254 aa8.45□□□□□ -1.06
TTC28-201ENST00000397906 LINC00574Q9H8X3 128 aa8.45□□□□□ -1.06
TTC28-201ENST00000397906 TTC28Q96AY4 2481 aa8.45□□□□□ -1.06
TTC28-201ENST00000397906 TMEM256-PLSCR3K7ERE1 68 aa8.44□□□□□ -1.06
TTC28-201ENST00000397906 RAI1Q7Z5J4 1906 aaPredicted RBP8.44□□□□□ -1.06
TTC28-201ENST00000397906 C19orf71A6NCJ1 209 aa8.44□□□□□ -1.06
TTC28-201ENST00000397906 TRBV10-2A0A0K0K1G8 114 aa8.44□□□□□ -1.06
TTC28-201ENST00000397906 ZFAND3Q9H8U3 227 aa8.44□□□□□ -1.06
TTC28-201ENST00000397906 UBE2D4Q9Y2X8 147 aa8.44□□□□□ -1.06
TTC28-201ENST00000397906 COL5A1P20908 1838 aaPredicted RBP8.43□□□□□ -1.06
TTC28-201ENST00000397906 AVPP01185 164 aa8.43□□□□□ -1.06
TTC28-201ENST00000397906 LINC01620Q4KN68 170 aa8.43□□□□□ -1.06
TTC28-201ENST00000397906 IGHV4-30-4P0DP06 118 aa8.43□□□□□ -1.06
TTC28-201ENST00000397906 H3BQ85 93 aa8.43□□□□□ -1.06
TTC28-201ENST00000397906 ACYP1P07311 99 aa8.43□□□□□ -1.06
TTC28-201ENST00000397906 CDKN2A-AS1Q9UH64 79 aa8.43□□□□□ -1.06
TTC28-201ENST00000397906 CRYGBP07316 175 aa8.43□□□□□ -1.06
TTC28-201ENST00000397906 SPINK6Q6UWN8 80 aa8.43□□□□□ -1.06
TTC28-201ENST00000397906 KIR2DL5BQ8NHK3 375 aa8.43□□□□□ -1.06
TTC28-201ENST00000397906 A0A0B4J2C4 111 aa8.42□□□□□ -1.06
TTC28-201ENST00000397906 RPL37AP8A6NKH3 93 aa8.42□□□□□ -1.06
TTC28-201ENST00000397906 BRI3O95415 125 aa8.42□□□□□ -1.06
TTC28-201ENST00000397906 SLPIP03973 132 aa8.42□□□□□ -1.06
TTC28-201ENST00000397906 MIAQ16674 131 aa8.41□□□□□ -1.06
TTC28-201ENST00000397906 JMJD7-PLA2G4BH0Y9G9 81 aa8.41□□□□□ -1.06
TTC28-201ENST00000397906 PIK3CD-AS1Q5SR53 167 aa8.41□□□□□ -1.06
TTC28-201ENST00000397906 SEC61GP60059 68 aa8.41□□□□□ -1.06
TTC28-201ENST00000397906 P0C879 139 aa8.41□□□□□ -1.06
TTC28-201ENST00000397906 CASC2Q6XLA1 102 aa8.41□□□□□ -1.06
TTC28-201ENST00000397906 MUC22E2RYF6 1773 aaPredicted RBP8.4□□□□□ -1.06
TTC28-201ENST00000397906 EDN2P20800 178 aa8.4□□□□□ -1.06
TTC28-201ENST00000397906 A0A0J9YXY3 114 aa8.4□□□□□ -1.06
TTC28-201ENST00000397906 UBE2D3P61077 147 aa8.4□□□□□ -1.06
TTC28-201ENST00000397906 WFDC10BQ8IUB3 73 aa8.4□□□□□ -1.06
TTC28-201ENST00000397906 NOTCH2Q04721 2471 aa8.4□□□□□ -1.07
TTC28-201ENST00000397906 SCXQ7RTU7 201 aa8.4□□□□□ -1.07
TTC28-201ENST00000397906 TRBV6-4A0A1B0GX49 114 aa8.4□□□□□ -1.07
TTC28-201ENST00000397906 H7C423 109 aa8.4□□□□□ -1.07
TTC28-201ENST00000397906 SYCNQ0VAF6 134 aa8.4□□□□□ -1.07
TTC28-201ENST00000397906 EBI3Q14213 229 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms