RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 CAMPP49913 170 aa10.62□□□□□ -0.71
CUX2-202ENST00000397643 RAB4BP61018 213 aa10.62□□□□□ -0.71
CUX2-202ENST00000397643 HBBP68871 147 aa10.62□□□□□ -0.71
CUX2-202ENST00000397643 LAGE3Q14657 143 aa10.62□□□□□ -0.71
CUX2-202ENST00000397643 ZNF56Q15929 161 aa10.62□□□□□ -0.71
CUX2-202ENST00000397643 TMEM191AQ9H0A3 160 aa10.62□□□□□ -0.71
CUX2-202ENST00000397643 PLA2G2DQ9UNK4 145 aa10.62□□□□□ -0.71
CUX2-202ENST00000397643 URGCP-MRPS24S4R325 110 aa10.62□□□□□ -0.71
CUX2-202ENST00000397643 TRAV8-6A0A0B4J262 113 aa10.61□□□□□ -0.71
CUX2-202ENST00000397643 TRBV6-4A0A1B0GX49 114 aa10.61□□□□□ -0.71
CUX2-202ENST00000397643 A0A1B0GXF2 115 aa10.61□□□□□ -0.71
CUX2-202ENST00000397643 OXTP01178 125 aa10.61□□□□□ -0.71
CUX2-202ENST00000397643 S100A1P23297 94 aa10.61□□□□□ -0.71
CUX2-202ENST00000397643 RHOHQ15669 191 aa10.6□□□□□ -0.71
CUX2-202ENST00000397643 LINC01620Q4KN68 170 aa10.6□□□□□ -0.71
CUX2-202ENST00000397643 OR10J3Q5JRS4 329 aa10.6□□□□□ -0.71
CUX2-202ENST00000397643 LELP1Q5T871 98 aa10.6□□□□□ -0.71
CUX2-202ENST00000397643 Q8N3U1 123 aa10.6□□□□□ -0.71
CUX2-202ENST00000397643 SLC25A29Q8N8R3 303 aa10.6□□□□□ -0.71
CUX2-202ENST00000397643 PRADC1Q9BSG0 188 aa10.6□□□□□ -0.71
CUX2-202ENST00000397643 SMCO4Q9NRQ5 59 aa10.6□□□□□ -0.71
CUX2-202ENST00000397643 LECT2O14960 151 aa10.59□□□□□ -0.71
CUX2-202ENST00000397643 ATP6V1G1O75348 118 aa10.59□□□□□ -0.71
CUX2-202ENST00000397643 RASL11AQ6T310 242 aa10.59□□□□□ -0.71
CUX2-202ENST00000397643 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.58□□□□□ -0.72
CUX2-202ENST00000397643 H7C1H1 209 aa10.58□□□□□ -0.72
CUX2-202ENST00000397643 GATD1Q8NB37 220 aa10.58□□□□□ -0.72
CUX2-202ENST00000397643 TM2D2Q9BX73 214 aa10.58□□□□□ -0.72
CUX2-202ENST00000397643 FAM104BQ5XKR9 115 aa10.57□□□□□ -0.72
CUX2-202ENST00000397643 SUMO4Q6EEV6 95 aa10.57□□□□□ -0.72
CUX2-202ENST00000397643 AMN1Q8IY45 258 aa10.57□□□□□ -0.72
CUX2-202ENST00000397643 TRBV10-1A0A0K0K1A3 114 aa10.56□□□□□ -0.72
CUX2-202ENST00000397643 RAB4AP20338 218 aa10.56□□□□□ -0.72
CUX2-202ENST00000397643 ELOBQ15370 118 aa10.56□□□□□ -0.72
CUX2-202ENST00000397643 COX19Q49B96 90 aa10.56□□□□□ -0.72
CUX2-202ENST00000397643 CHAC1Q9BUX1 264 aa10.56□□□□□ -0.72
CUX2-202ENST00000397643 TRBV24-1A0A075B6N3 115 aa10.55□□□□□ -0.72
CUX2-202ENST00000397643 M0QY20 66 aa10.55□□□□□ -0.72
CUX2-202ENST00000397643 CBLN2Q8IUK8 224 aa10.55□□□□□ -0.72
CUX2-202ENST00000397643 CIRBP-AS1Q8TBR5 109 aa10.55□□□□□ -0.72
CUX2-202ENST00000397643 MRAP2Q96G30 205 aa10.55□□□□□ -0.72
CUX2-202ENST00000397643 RNF185Q96GF1 192 aa10.55□□□□□ -0.72
CUX2-202ENST00000397643 GTSF1LQ9H1H1 148 aa10.55□□□□□ -0.72
CUX2-202ENST00000397643 TGIF2-C20orf24A0A0A6YYL0 155 aa10.54□□□□□ -0.72
CUX2-202ENST00000397643 RPL36AP83881 106 aaKnown RBP10.54□□□□□ -0.72
CUX2-202ENST00000397643 RPL36ALQ969Q0 106 aaKnown RBP10.54□□□□□ -0.72
CUX2-202ENST00000397643 TRAV8-3A0A0A6YYJ7 113 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 TRAV26-2A0A0B4J265 109 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 GAGE12JA6NER3 117 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 GAGE1Q13065 139 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 GAGE4Q13068 117 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 GAGE5Q13069 117 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 MRPL51Q4U2R6 128 aaKnown RBP10.53□□□□□ -0.72
CUX2-202ENST00000397643 GAGE13Q4V321 117 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 TMEM136Q6ZRR5 245 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 BAALCQ8WXS3 180 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 DNAJC30Q96LL9 226 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 GNB1LQ9BYB4 327 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 NIT2Q9NQR4 276 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 HLA-DQA1P01909 254 aa10.52□□□□□ -0.73
CUX2-202ENST00000397643 LINC00694P0DN24 101 aa10.52□□□□□ -0.73
CUX2-202ENST00000397643 CKS2P33552 79 aa10.52□□□□□ -0.73
CUX2-202ENST00000397643 DAZ4Q86SG3 579 aaKnown RBP10.52□□□□□ -0.73
CUX2-202ENST00000397643 NEXN-AS1Q8NBZ9 246 aa10.52□□□□□ -0.73
CUX2-202ENST00000397643 ATP6V0E2Q8NHE4 81 aa10.52□□□□□ -0.73
CUX2-202ENST00000397643 YPEL4Q96NS1 127 aa10.52□□□□□ -0.73
CUX2-202ENST00000397643 DAZ3Q9NR90 486 aaKnown RBP10.52□□□□□ -0.73
CUX2-202ENST00000397643 TRBV7-3A0A075B6L6 115 aa10.51□□□□□ -0.73
CUX2-202ENST00000397643 PPP1R17O96001 155 aa10.51□□□□□ -0.73
CUX2-202ENST00000397643 PPBPP02775 128 aa10.51□□□□□ -0.73
CUX2-202ENST00000397643 MT-ND6P03923 174 aa10.51□□□□□ -0.73
CUX2-202ENST00000397643 HNRNPA3P51991 378 aaKnown RBP10.51□□□□□ -0.73
CUX2-202ENST00000397643 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.51□□□□□ -0.73
CUX2-202ENST00000397643 Q9UF83 564 aa10.51□□□□□ -0.73
CUX2-202ENST00000397643 SCO1O75880 301 aa10.5□□□□□ -0.73
CUX2-202ENST00000397643 APCSP02743 223 aa10.5□□□□□ -0.73
CUX2-202ENST00000397643 SMKR1H3BMG3 65 aa10.49□□□□□ -0.73
CUX2-202ENST00000397643 NCR2O95944 276 aa10.49□□□□□ -0.73
CUX2-202ENST00000397643 ORMDL3Q8N138 153 aa10.49□□□□□ -0.73
CUX2-202ENST00000397643 D6R8Y8 96 aa10.48□□□□□ -0.73
CUX2-202ENST00000397643 UBE2D3P61077 147 aa10.48□□□□□ -0.73
CUX2-202ENST00000397643 UBE2D2P62837 147 aa10.48□□□□□ -0.73
CUX2-202ENST00000397643 Q8N976 141 aa10.48□□□□□ -0.73
CUX2-202ENST00000397643 RPL39LQ96EH5 51 aaKnown RBP10.48□□□□□ -0.73
CUX2-202ENST00000397643 ST20Q9HBF5 79 aa10.48□□□□□ -0.73
CUX2-202ENST00000397643 TNXBP22105 4242 aa10.47□□□□□ -0.73
CUX2-202ENST00000397643 TRBV6-5A0A0K0K1A5 114 aa10.47□□□□□ -0.73
CUX2-202ENST00000397643 GAS8-AS1O95177 125 aa10.47□□□□□ -0.73
CUX2-202ENST00000397643 MT1HL1P0DM35 61 aa10.47□□□□□ -0.73
CUX2-202ENST00000397643 FABP9Q0Z7S8 132 aa10.47□□□□□ -0.73
CUX2-202ENST00000397643 PRELID3AQ96N28 172 aa10.47□□□□□ -0.73
CUX2-202ENST00000397643 MRPL18Q9H0U6 180 aaKnown RBP10.47□□□□□ -0.73
CUX2-202ENST00000397643 TRAPPC1Q9Y5R8 145 aa10.47□□□□□ -0.73
CUX2-202ENST00000397643 COX11Q9Y6N1 276 aa10.47□□□□□ -0.73
CUX2-202ENST00000397643 LRP2P98164 4655 aa10.46□□□□□ -0.73
CUX2-202ENST00000397643 PHOX2AO14813 284 aa10.46□□□□□ -0.73
CUX2-202ENST00000397643 RPS10P46783 165 aaKnown RBP10.46□□□□□ -0.73
CUX2-202ENST00000397643 NRACQ8N912 160 aa10.46□□□□□ -0.73
CUX2-202ENST00000397643 RNF213Q63HN8 5207 aa10.45□□□□□ -0.74
CUX2-202ENST00000397643 COLCA2A8K830 154 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms