RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 H7C1H1 209 aa4.02□□□□□ -1.77
PTPN20-208ENST00000395727 BCL2P10415 239 aa4.02□□□□□ -1.77
PTPN20-208ENST00000395727 CTRLP40313 264 aa4.02□□□□□ -1.77
PTPN20-208ENST00000395727 GNG4P50150 75 aa4.02□□□□□ -1.77
PTPN20-208ENST00000395727 CACNG7P62955 275 aa4.02□□□□□ -1.77
PTPN20-208ENST00000395727 WFDC2Q14508 124 aa4.02□□□□□ -1.77
PTPN20-208ENST00000395727 MIAQ16674 131 aa4.02□□□□□ -1.77
PTPN20-208ENST00000395727 WDR73Q6P4I2 378 aa4.02□□□□□ -1.77
PTPN20-208ENST00000395727 KCNIP4Q6PIL6 250 aa4.02□□□□□ -1.77
PTPN20-208ENST00000395727 Q8N976 141 aa4.02□□□□□ -1.77
PTPN20-208ENST00000395727 FER1L6-AS1Q8NA97 138 aa4.02□□□□□ -1.77
PTPN20-208ENST00000395727 PRR34Q9NV39 138 aa4.02□□□□□ -1.77
PTPN20-208ENST00000395727 TMEM250H0YL14 139 aa4.01□□□□□ -1.77
PTPN20-208ENST00000395727 M0QY20 66 aa4.01□□□□□ -1.77
PTPN20-208ENST00000395727 TRGC1P0CF51 173 aa4.01□□□□□ -1.77
PTPN20-208ENST00000395727 SMIM17P0DL12 118 aa4.01□□□□□ -1.77
PTPN20-208ENST00000395727 FUSP35637 526 aaKnown RBP eCLIP4.01□□□□□ -1.77
PTPN20-208ENST00000395727 IQCJQ1A5X6 159 aa4.01□□□□□ -1.77
PTPN20-208ENST00000395727 C14orf177Q52M58 125 aa4.01□□□□□ -1.77
PTPN20-208ENST00000395727 C9orf62Q8N4C0 152 aa4.01□□□□□ -1.77
PTPN20-208ENST00000395727 LYPD6BQ8NI32 183 aa4.01□□□□□ -1.77
PTPN20-208ENST00000395727 PGLYRP4Q96LB8 373 aa4.01□□□□□ -1.77
PTPN20-208ENST00000395727 KLK12Q9UKR0 248 aa4.01□□□□□ -1.77
PTPN20-208ENST00000395727 TRBV25-1A0A075B6N4 114 aa4□□□□□ -1.77
PTPN20-208ENST00000395727 IGKV2D-24A0A075B6R9 120 aa4□□□□□ -1.77
PTPN20-208ENST00000395727 P01737 135 aa4□□□□□ -1.77
PTPN20-208ENST00000395727 CRPP02741 224 aa4□□□□□ -1.77
PTPN20-208ENST00000395727 INAFM2P0DMQ5 153 aa4□□□□□ -1.77
PTPN20-208ENST00000395727 MPV17L2Q567V2 206 aa4□□□□□ -1.77
PTPN20-208ENST00000395727 ENHOQ6UWT2 76 aa4□□□□□ -1.77
PTPN20-208ENST00000395727 NTM-AS1Q6ZSK4 140 aa4□□□□□ -1.77
PTPN20-208ENST00000395727 OR2D3Q8NGH3 330 aa4□□□□□ -1.77
PTPN20-208ENST00000395727 UBE2WQ96B02 151 aa4□□□□□ -1.77
PTPN20-208ENST00000395727 IGKV2D-30A0A075B6S6 120 aa3.99□□□□□ -1.77
PTPN20-208ENST00000395727 A0A1B0GUV1 79 aa3.99□□□□□ -1.77
PTPN20-208ENST00000395727 RAB19A4D1S5 217 aa3.99□□□□□ -1.77
PTPN20-208ENST00000395727 AMTP48728 403 aa3.99□□□□□ -1.77
PTPN20-208ENST00000395727 KRTAP26-1Q6PEX3 210 aa3.99□□□□□ -1.77
PTPN20-208ENST00000395727 RASL11AQ6T310 242 aa3.99□□□□□ -1.77
PTPN20-208ENST00000395727 FAM231DQ6ZW35 169 aa3.99□□□□□ -1.77
PTPN20-208ENST00000395727 AKAP14Q86UN6 197 aa3.99□□□□□ -1.77
PTPN20-208ENST00000395727 BAALCQ8WXS3 180 aa3.99□□□□□ -1.77
PTPN20-208ENST00000395727 FAM210AQ96ND0 272 aa3.99□□□□□ -1.77
PTPN20-208ENST00000395727 DPH3P1Q9H4G8 78 aa3.99□□□□□ -1.77
PTPN20-208ENST00000395727 NIT2Q9NQR4 276 aa3.99□□□□□ -1.77
PTPN20-208ENST00000395727 MED9Q9NWA0 146 aa3.99□□□□□ -1.77
PTPN20-208ENST00000395727 ABCA13Q86UQ4 5058 aa3.98□□□□□ -1.77
PTPN20-208ENST00000395727 TRAV8-4A0A0B4J246 113 aa3.98□□□□□ -1.77
PTPN20-208ENST00000395727 IGHV1-24A0A0C4DH33 117 aa3.98□□□□□ -1.77
PTPN20-208ENST00000395727 TMEM262E9PQX1 116 aa3.98□□□□□ -1.77
PTPN20-208ENST00000395727 LECT2O14960 151 aa3.98□□□□□ -1.77
PTPN20-208ENST00000395727 ANGP03950 147 aaKnown RBP3.98□□□□□ -1.77
PTPN20-208ENST00000395727 GZMBP10144 247 aa3.98□□□□□ -1.77
PTPN20-208ENST00000395727 NTF3P20783 257 aa3.98□□□□□ -1.77
PTPN20-208ENST00000395727 FOXA3P55318 350 aaPredicted RBP3.98□□□□□ -1.77
PTPN20-208ENST00000395727 RBX1P62877 108 aa3.98□□□□□ -1.77
PTPN20-208ENST00000395727 SERTAD4-AS1Q5TG53 156 aa3.98□□□□□ -1.77
PTPN20-208ENST00000395727 TEX261Q6UWH6 196 aa3.98□□□□□ -1.77
PTPN20-208ENST00000395727 LYZL1Q6UWQ5 148 aa3.98□□□□□ -1.77
PTPN20-208ENST00000395727 CHCHD5Q9BSY4 110 aa3.98□□□□□ -1.77
PTPN20-208ENST00000395727 CHAC1Q9BUX1 264 aa3.98□□□□□ -1.77
PTPN20-208ENST00000395727 KRTAP9-8Q9BYQ0 159 aa3.98□□□□□ -1.77
PTPN20-208ENST00000395727 RPP21Q9H633 154 aaKnown RBP3.98□□□□□ -1.77
PTPN20-208ENST00000395727 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.97□□□□□ -1.77
PTPN20-208ENST00000395727 MUC21A0A0G2JKD1 596 aa3.97□□□□□ -1.77
PTPN20-208ENST00000395727 MUC21A0A140T8X8 626 aa3.97□□□□□ -1.77
PTPN20-208ENST00000395727 FAM231BA6NCW3 169 aa3.97□□□□□ -1.77
PTPN20-208ENST00000395727 H7C423 109 aa3.97□□□□□ -1.77
PTPN20-208ENST00000395727 K7EN84 100 aa3.97□□□□□ -1.77
PTPN20-208ENST00000395727 NCR2O95944 276 aa3.97□□□□□ -1.77
PTPN20-208ENST00000395727 SMR3BP02814 79 aaPredicted RBP3.97□□□□□ -1.77
PTPN20-208ENST00000395727 MGPP08493 103 aa3.97□□□□□ -1.77
PTPN20-208ENST00000395727 SCXQ7RTU7 201 aa3.97□□□□□ -1.77
PTPN20-208ENST00000395727 C15orf54Q8N8G6 183 aa3.97□□□□□ -1.77
PTPN20-208ENST00000395727 C9orf163Q8N9P6 203 aa3.97□□□□□ -1.77
PTPN20-208ENST00000395727 C20orf203Q8NBC4 194 aa3.97□□□□□ -1.77
PTPN20-208ENST00000395727 OCC1Q8TAD7 63 aa3.97□□□□□ -1.77
PTPN20-208ENST00000395727 TMEM243Q9BU79 118 aa3.97□□□□□ -1.77
PTPN20-208ENST00000395727 TPPP3Q9BW30 176 aa3.97□□□□□ -1.77
PTPN20-208ENST00000395727 TRBV6-5A0A0K0K1A5 114 aa3.96□□□□□ -1.78
PTPN20-208ENST00000395727 A8MWL6 223 aa3.96□□□□□ -1.78
PTPN20-208ENST00000395727 USP17L23D6RBM5 183 aa3.96□□□□□ -1.78
PTPN20-208ENST00000395727 NKX2-5P52952 324 aaPredicted RBP3.96□□□□□ -1.78
PTPN20-208ENST00000395727 KRTAP10-4P60372 401 aaPredicted RBP3.96□□□□□ -1.78
PTPN20-208ENST00000395727 CNBPP62633 177 aaKnown RBP3.96□□□□□ -1.78
PTPN20-208ENST00000395727 REG3AQ06141 175 aa3.96□□□□□ -1.78
PTPN20-208ENST00000395727 GAGE6Q13070 117 aa3.96□□□□□ -1.78
PTPN20-208ENST00000395727 COTL1Q14019 142 aa3.96□□□□□ -1.78
PTPN20-208ENST00000395727 GTSF1Q8WW33 167 aa3.96□□□□□ -1.78
PTPN20-208ENST00000395727 GFRA4Q9GZZ7 299 aa3.96□□□□□ -1.78
PTPN20-208ENST00000395727 RNASE7Q9H1E1 156 aaKnown RBP3.96□□□□□ -1.78
PTPN20-208ENST00000395727 HLA-DQA1P01909 254 aa3.95□□□□□ -1.78
PTPN20-208ENST00000395727 PRSS1P07477 247 aa3.95□□□□□ -1.78
PTPN20-208ENST00000395727 HAMPP81172 84 aa3.95□□□□□ -1.78
PTPN20-208ENST00000395727 CIRBPQ14011 172 aaKnown RBP3.95□□□□□ -1.78
PTPN20-208ENST00000395727 ALKAL2Q6UX46 152 aa3.95□□□□□ -1.78
PTPN20-208ENST00000395727 SMIM15Q7Z3B0 74 aa3.95□□□□□ -1.78
PTPN20-208ENST00000395727 LINC01551Q86U37 167 aa3.95□□□□□ -1.78
PTPN20-208ENST00000395727 LINC00269Q8N2A0 174 aa3.95□□□□□ -1.78
PTPN20-208ENST00000395727 GATD1Q8NB37 220 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms