RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 IGHV3-16A0A0C4DH30 117 aa10.58□□□□□ -0.72
CLIP2-203ENST00000395060 IGKV2-29A2NJV5 120 aaPredicted RBP10.58□□□□□ -0.72
CLIP2-203ENST00000395060 KLLNB2CW77 178 aa10.58□□□□□ -0.72
CLIP2-203ENST00000395060 C20orf203Q8NBC4 194 aa10.57□□□□□ -0.72
CLIP2-203ENST00000395060 CITED1Q99966 193 aa10.57□□□□□ -0.72
CLIP2-203ENST00000395060 DOPEY1Q5JWR5 2465 aa10.57□□□□□ -0.72
CLIP2-203ENST00000395060 H3BMM0 161 aa10.56□□□□□ -0.72
CLIP2-203ENST00000395060 UBE2WQ96B02 151 aa10.56□□□□□ -0.72
CLIP2-203ENST00000395060 ID1P41134 155 aa10.56□□□□□ -0.72
CLIP2-203ENST00000395060 NDUFA12Q9UI09 145 aa10.56□□□□□ -0.72
CLIP2-203ENST00000395060 IGHV1-69P01742 117 aa10.56□□□□□ -0.72
CLIP2-203ENST00000395060 ODF3Q96PU9 254 aa10.56□□□□□ -0.72
CLIP2-203ENST00000395060 PRORYQ9H606 182 aa10.56□□□□□ -0.72
CLIP2-203ENST00000395060 LGALS9O00182 355 aa10.55□□□□□ -0.72
CLIP2-203ENST00000395060 MED14OSP0DP75 135 aa10.55□□□□□ -0.72
CLIP2-203ENST00000395060 IFITM1P13164 125 aa10.55□□□□□ -0.72
CLIP2-203ENST00000395060 SMIM20Q8N5G0 67 aa10.55□□□□□ -0.72
CLIP2-203ENST00000395060 DCANP1Q8TF63 244 aa10.55□□□□□ -0.72
CLIP2-203ENST00000395060 NRGNQ92686 78 aa10.55□□□□□ -0.72
CLIP2-203ENST00000395060 JMJD1CQ15652 2540 aa10.55□□□□□ -0.72
CLIP2-203ENST00000395060 IGHV4-61A0A0C4DH41 118 aa10.55□□□□□ -0.72
CLIP2-203ENST00000395060 I3L3M4 83 aa10.55□□□□□ -0.72
CLIP2-203ENST00000395060 SYNJ2BPP57105 145 aa10.55□□□□□ -0.72
CLIP2-203ENST00000395060 NXPH4O95158 308 aa10.54□□□□□ -0.72
CLIP2-203ENST00000395060 ICOSQ9Y6W8 199 aa10.54□□□□□ -0.72
CLIP2-203ENST00000395060 M0R2P5 195 aa10.54□□□□□ -0.72
CLIP2-203ENST00000395060 CHCHD5Q9BSY4 110 aa10.54□□□□□ -0.72
CLIP2-203ENST00000395060 H7C423 109 aa10.53□□□□□ -0.72
CLIP2-203ENST00000395060 IGHV1OR15-1A0A075B7D0 117 aa10.53□□□□□ -0.72
CLIP2-203ENST00000395060 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.53□□□□□ -0.72
CLIP2-203ENST00000395060 A0A0B4J2C4 111 aa10.53□□□□□ -0.72
CLIP2-203ENST00000395060 GAGE12JA6NER3 117 aa10.53□□□□□ -0.72
CLIP2-203ENST00000395060 GAGE7O76087 117 aa10.53□□□□□ -0.72
CLIP2-203ENST00000395060 GAGE12FP0CL80 117 aa10.53□□□□□ -0.72
CLIP2-203ENST00000395060 GAGE12GP0CL81 117 aa10.53□□□□□ -0.72
CLIP2-203ENST00000395060 GAGE12IP0CL82 117 aa10.53□□□□□ -0.72
CLIP2-203ENST00000395060 RPL13AP40429 203 aaKnown RBP10.53□□□□□ -0.72
CLIP2-203ENST00000395060 GAGE4Q13068 117 aa10.53□□□□□ -0.72
CLIP2-203ENST00000395060 C19orf54Q5BKX5 351 aa10.53□□□□□ -0.72
CLIP2-203ENST00000395060 TRBV10-2A0A0K0K1G8 114 aa10.52□□□□□ -0.73
CLIP2-203ENST00000395060 SONP18583 2426 aaKnown RBP10.52□□□□□ -0.73
CLIP2-203ENST00000395060 POM121L12Q8N7R1 296 aa10.51□□□□□ -0.73
CLIP2-203ENST00000395060 FBN2P35556 2912 aa10.51□□□□□ -0.73
CLIP2-203ENST00000395060 APRG1Q8IVJ8 170 aa10.51□□□□□ -0.73
CLIP2-203ENST00000395060 MAPK1IP1LQ8NDC0 245 aa10.51□□□□□ -0.73
CLIP2-203ENST00000395060 USMG5Q96IX5 58 aa10.51□□□□□ -0.73
CLIP2-203ENST00000395060 SNRPD3P62318 126 aaKnown RBP10.51□□□□□ -0.73
CLIP2-203ENST00000395060 NSUN5P1Q3KNT7 163 aa10.51□□□□□ -0.73
CLIP2-203ENST00000395060 Q6ZSN1 163 aa10.51□□□□□ -0.73
CLIP2-203ENST00000395060 C9orf85Q96MD7 179 aa10.51□□□□□ -0.73
CLIP2-203ENST00000395060 TNFRSF18Q9Y5U5 241 aa10.51□□□□□ -0.73
CLIP2-203ENST00000395060 A0A0J9YX75 114 aa10.5□□□□□ -0.73
CLIP2-203ENST00000395060 IGHG2P01859 326 aa10.5□□□□□ -0.73
CLIP2-203ENST00000395060 RBMY1A1P0DJD3 496 aaKnown RBP10.5□□□□□ -0.73
CLIP2-203ENST00000395060 RBMY1CP0DJD4 496 aa10.5□□□□□ -0.73
CLIP2-203ENST00000395060 RBMY1FQ15415 496 aaKnown RBP10.5□□□□□ -0.73
CLIP2-203ENST00000395060 LITAFQ99732 161 aa10.5□□□□□ -0.73
CLIP2-203ENST00000395060 NIPBLQ6KC79 2804 aaeCLIP10.49□□□□□ -0.73
CLIP2-203ENST00000395060 TRBV6-5A0A0K0K1A5 114 aa10.49□□□□□ -0.73
CLIP2-203ENST00000395060 NDUFA7O95182 113 aa10.49□□□□□ -0.73
CLIP2-203ENST00000395060 COX6CP09669 75 aa10.49□□□□□ -0.73
CLIP2-203ENST00000395060 ATP5J2P56134 94 aa10.49□□□□□ -0.73
CLIP2-203ENST00000395060 CCL19Q99731 98 aa10.49□□□□□ -0.73
CLIP2-203ENST00000395060 RHOHQ15669 191 aa10.49□□□□□ -0.73
CLIP2-203ENST00000395060 DEFB136Q30KP8 78 aa10.49□□□□□ -0.73
CLIP2-203ENST00000395060 MXRA5Q9NR99 2828 aa10.49□□□□□ -0.73
CLIP2-203ENST00000395060 IGHV3OR16-12A0A075B7B8 117 aa10.49□□□□□ -0.73
CLIP2-203ENST00000395060 ANKRD17O75179 2603 aaKnown RBP10.48□□□□□ -0.73
CLIP2-203ENST00000395060 NAV2Q8IVL1 2488 aa10.48□□□□□ -0.73
CLIP2-203ENST00000395060 RPL32P62910 135 aaKnown RBP10.48□□□□□ -0.73
CLIP2-203ENST00000395060 KLK9Q2XQG4 91 aa10.48□□□□□ -0.73
CLIP2-203ENST00000395060 MEIG1Q5JSS6 88 aa10.48□□□□□ -0.73
CLIP2-203ENST00000395060 AVPP01185 164 aa10.48□□□□□ -0.73
CLIP2-203ENST00000395060 PRB1P04280 392 aa10.48□□□□□ -0.73
CLIP2-203ENST00000395060 HERV-K104P63124 156 aa10.48□□□□□ -0.73
CLIP2-203ENST00000395060 CDKN2A-AS1Q9UH64 79 aa10.48□□□□□ -0.73
CLIP2-203ENST00000395060 IGHV4-30-2A0A087WSY4 118 aa10.47□□□□□ -0.73
CLIP2-203ENST00000395060 RS1O15537 224 aa10.47□□□□□ -0.73
CLIP2-203ENST00000395060 FAM104AQ969W3 186 aa10.47□□□□□ -0.73
CLIP2-203ENST00000395060 NOTCH2Q04721 2471 aa10.47□□□□□ -0.73
CLIP2-203ENST00000395060 TRGV11A0A075B6L2 103 aa10.47□□□□□ -0.73
CLIP2-203ENST00000395060 TRBV30A0A0K0K1B3 111 aa10.47□□□□□ -0.73
CLIP2-203ENST00000395060 IGHV1-58A0A0C4DH39 117 aa10.47□□□□□ -0.73
CLIP2-203ENST00000395060 IGHV4-59P01825 116 aa10.47□□□□□ -0.73
CLIP2-203ENST00000395060 LINC00467Q9BRT7 94 aa10.47□□□□□ -0.73
CLIP2-203ENST00000395060 CHD6Q8TD26 2715 aa10.47□□□□□ -0.73
CLIP2-203ENST00000395060 USP24Q9UPU5 2620 aa10.46□□□□□ -0.73
CLIP2-203ENST00000395060 DGAT2L7PQ6IED9 249 aa10.46□□□□□ -0.74
CLIP2-203ENST00000395060 DEFB131AP59861 70 aa10.45□□□□□ -0.74
CLIP2-203ENST00000395060 CCDC168Q8NDH2 2452 aa10.45□□□□□ -0.74
CLIP2-203ENST00000395060 SHISA2Q6UWI4 295 aa10.45□□□□□ -0.74
CLIP2-203ENST00000395060 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.45□□□□□ -0.74
CLIP2-203ENST00000395060 VSIG2Q96IQ7 327 aa10.45□□□□□ -0.74
CLIP2-203ENST00000395060 PIMREGQ9BSJ6 248 aa10.45□□□□□ -0.74
CLIP2-203ENST00000395060 MIAQ16674 131 aa10.44□□□□□ -0.74
CLIP2-203ENST00000395060 TRAV13-1A0A0B4J241 112 aa10.44□□□□□ -0.74
CLIP2-203ENST00000395060 A6NDX4 124 aa10.44□□□□□ -0.74
CLIP2-203ENST00000395060 CFHR3Q02985 330 aa10.44□□□□□ -0.74
CLIP2-203ENST00000395060 TMEM61Q8N0U2 210 aa10.44□□□□□ -0.74
CLIP2-203ENST00000395060 TRBV7-9A0A0J9YWB2 115 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms