RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 DEFB1P60022 68 aa13.01□□□□□ -0.33
SIN3A-203ENST00000394949 MP68P56378 58 aa13.01□□□□□ -0.33
SIN3A-203ENST00000394949 Q9HAA7 133 aa13.01□□□□□ -0.33
SIN3A-203ENST00000394949 TRIAP1O43715 76 aa13.01□□□□□ -0.33
SIN3A-203ENST00000394949 NRGNQ92686 78 aa13□□□□□ -0.33
SIN3A-203ENST00000394949 ABCA2Q9BZC7 2435 aa13□□□□□ -0.33
SIN3A-203ENST00000394949 CAMK2N2Q96S95 79 aa13□□□□□ -0.33
SIN3A-203ENST00000394949 WISP2O76076 250 aa13□□□□□ -0.33
SIN3A-203ENST00000394949 ETDCA0A1B0GVM5 59 aa12.99□□□□□ -0.33
SIN3A-203ENST00000394949 UFSP1Q6NVU6 142 aa12.99□□□□□ -0.33
SIN3A-203ENST00000394949 IGLV4-3A0A075B6K6 122 aa12.99□□□□□ -0.33
SIN3A-203ENST00000394949 PKIGQ9Y2B9 76 aa12.99□□□□□ -0.33
SIN3A-203ENST00000394949 IGHV3-30P01768 117 aa12.98□□□□□ -0.33
SIN3A-203ENST00000394949 IGHV3-30-5P0DP03 117 aa12.98□□□□□ -0.33
SIN3A-203ENST00000394949 C5orf47Q569G3 176 aa12.98□□□□□ -0.33
SIN3A-203ENST00000394949 DEFB105AQ8NG35 78 aa12.98□□□□□ -0.33
SIN3A-203ENST00000394949 DIRC1Q969H9 104 aa12.98□□□□□ -0.33
SIN3A-203ENST00000394949 MED12LQ86YW9 2145 aa12.97□□□□□ -0.33
SIN3A-203ENST00000394949 CEMP1Q6PRD7 247 aaPredicted RBP12.97□□□□□ -0.33
SIN3A-203ENST00000394949 NDUFA1O15239 70 aa12.96□□□□□ -0.33
SIN3A-203ENST00000394949 TIMM17BO60830 172 aa12.96□□□□□ -0.33
SIN3A-203ENST00000394949 TNRC6BQ9UPQ9 1833 aaKnown RBP12.96□□□□□ -0.33
SIN3A-203ENST00000394949 TRBV6-5A0A0K0K1A5 114 aa12.96□□□□□ -0.33
SIN3A-203ENST00000394949 CLPSL1A2RUU4 121 aa12.96□□□□□ -0.33
SIN3A-203ENST00000394949 A6NDX4 124 aa12.96□□□□□ -0.33
SIN3A-203ENST00000394949 CCL18P55774 89 aa12.96□□□□□ -0.33
SIN3A-203ENST00000394949 NRACQ8N912 160 aa12.96□□□□□ -0.33
SIN3A-203ENST00000394949 LINC00308Q8TCZ7 52 aa12.96□□□□□ -0.33
SIN3A-203ENST00000394949 TRBV27A0A0K0K1C4 114 aa12.96□□□□□ -0.34
SIN3A-203ENST00000394949 TNFRSF13BO14836 293 aaPredicted RBP12.96□□□□□ -0.34
SIN3A-203ENST00000394949 TRBV12-3P01733 135 aa12.95□□□□□ -0.34
SIN3A-203ENST00000394949 HIGD2BQ4VC39 106 aa12.95□□□□□ -0.34
SIN3A-203ENST00000394949 UPK3BQ9BT76 320 aa12.95□□□□□ -0.34
SIN3A-203ENST00000394949 MRPS12O15235 138 aaKnown RBP12.95□□□□□ -0.34
SIN3A-203ENST00000394949 LMO4P61968 165 aa12.95□□□□□ -0.34
SIN3A-203ENST00000394949 TMEM263Q8WUH6 116 aaKnown RBP12.95□□□□□ -0.34
SIN3A-203ENST00000394949 ZFAND3Q9H8U3 227 aa12.95□□□□□ -0.34
SIN3A-203ENST00000394949 UBE2BP63146 152 aa12.95□□□□□ -0.34
SIN3A-203ENST00000394949 PYGO1Q9Y3Y4 419 aa12.95□□□□□ -0.34
SIN3A-203ENST00000394949 IGHV4-4A0A075B6R2 117 aa12.95□□□□□ -0.34
SIN3A-203ENST00000394949 ZFAND2AQ8N6M9 145 aa12.95□□□□□ -0.34
SIN3A-203ENST00000394949 IGLV10-54A0A075B6I4 117 aa12.94□□□□□ -0.34
SIN3A-203ENST00000394949 TIRAPP58753 221 aa12.94□□□□□ -0.34
SIN3A-203ENST00000394949 EBI3Q14213 229 aa12.94□□□□□ -0.34
SIN3A-203ENST00000394949 CDKN2A-AS1Q9UH64 79 aa12.94□□□□□ -0.34
SIN3A-203ENST00000394949 NCR3O14931 201 aa12.94□□□□□ -0.34
SIN3A-203ENST00000394949 XGP55808 180 aa12.94□□□□□ -0.34
SIN3A-203ENST00000394949 HHLA3Q9XRX5 114 aa12.94□□□□□ -0.34
SIN3A-203ENST00000394949 Q6Q795 121 aa12.94□□□□□ -0.34
SIN3A-203ENST00000394949 WFDC9Q8NEX5 89 aa12.94□□□□□ -0.34
SIN3A-203ENST00000394949 CNFNQ9BYD5 112 aa12.94□□□□□ -0.34
SIN3A-203ENST00000394949 IGF2RP11717 2491 aa12.94□□□□□ -0.34
SIN3A-203ENST00000394949 TRAV23DV6A0A075B6W5 121 aa12.93□□□□□ -0.34
SIN3A-203ENST00000394949 FAM236DA0A1B0GTK5 79 aa12.93□□□□□ -0.34
SIN3A-203ENST00000394949 FAM236CP0DP71 79 aa12.93□□□□□ -0.34
SIN3A-203ENST00000394949 SMAD5-AS1Q9Y6J3 95 aa12.93□□□□□ -0.34
SIN3A-203ENST00000394949 M0QY20 66 aa12.93□□□□□ -0.34
SIN3A-203ENST00000394949 NDUFA7O95182 113 aa12.93□□□□□ -0.34
SIN3A-203ENST00000394949 SDIM1Q6ZPB5 146 aa12.93□□□□□ -0.34
SIN3A-203ENST00000394949 C4orf3Q8WVX3 66 aa12.93□□□□□ -0.34
SIN3A-203ENST00000394949 INSL3P51460 131 aa12.93□□□□□ -0.34
SIN3A-203ENST00000394949 C20orf197Q8N268 126 aa12.93□□□□□ -0.34
SIN3A-203ENST00000394949 PCNX3Q9H6A9 2034 aa12.92□□□□□ -0.34
SIN3A-203ENST00000394949 LY6LH3BQJ8 138 aa12.92□□□□□ -0.34
SIN3A-203ENST00000394949 SPAG11BQ08648 103 aa12.92□□□□□ -0.34
SIN3A-203ENST00000394949 IGF1P05019 195 aa12.92□□□□□ -0.34
SIN3A-203ENST00000394949 URB1-AS1Q96HZ7 61 aa12.92□□□□□ -0.34
SIN3A-203ENST00000394949 H7C423 109 aa12.91□□□□□ -0.34
SIN3A-203ENST00000394949 LST1O00453 97 aa12.91□□□□□ -0.34
SIN3A-203ENST00000394949 FAM222AQ5U5X8 452 aa12.9□□□□□ -0.34
SIN3A-203ENST00000394949 C2orf16Q68DN1 1984 aa12.9□□□□□ -0.34
SIN3A-203ENST00000394949 IBA57-AS1B1ANH7 110 aa12.9□□□□□ -0.34
SIN3A-203ENST00000394949 K7EQG2 157 aa12.9□□□□□ -0.34
SIN3A-203ENST00000394949 C20orf173Q96LM9 149 aa12.9□□□□□ -0.34
SIN3A-203ENST00000394949 LINC00467Q9BRT7 94 aa12.9□□□□□ -0.34
SIN3A-203ENST00000394949 PRO3102Q9H379 93 aa12.9□□□□□ -0.34
SIN3A-203ENST00000394949 SERP2Q8N6R1 65 aa12.89□□□□□ -0.35
SIN3A-203ENST00000394949 IGHV4-28A0A0C4DH34 117 aa12.89□□□□□ -0.35
SIN3A-203ENST00000394949 LRRC75A-AS1Q8N1F1 130 aa12.89□□□□□ -0.35
SIN3A-203ENST00000394949 PLXNB1O43157 2135 aa12.88□□□□□ -0.35
SIN3A-203ENST00000394949 TLN1Q9Y490 2541 aaKnown RBP12.88□□□□□ -0.35
SIN3A-203ENST00000394949 COX7BP24311 80 aa12.88□□□□□ -0.35
SIN3A-203ENST00000394949 BRK1Q8WUW1 75 aa12.88□□□□□ -0.35
SIN3A-203ENST00000394949 NDUFB1O75438 58 aa12.88□□□□□ -0.35
SIN3A-203ENST00000394949 PIEZO2Q9H5I5 2752 aa12.88□□□□□ -0.35
SIN3A-203ENST00000394949 LTBP2Q14767 1821 aa12.87□□□□□ -0.35
SIN3A-203ENST00000394949 DSCAML1Q8TD84 2053 aa12.87□□□□□ -0.35
SIN3A-203ENST00000394949 FAM240AA0A1B0GVK7 77 aa12.87□□□□□ -0.35
SIN3A-203ENST00000394949 RPL18AQ02543 176 aaKnown RBP12.87□□□□□ -0.35
SIN3A-203ENST00000394949 PRORYQ9H606 182 aa12.87□□□□□ -0.35
SIN3A-203ENST00000394949 MAP6D1Q9H9H5 199 aa12.87□□□□□ -0.35
SIN3A-203ENST00000394949 PRO0255Q9UI72 69 aa12.86□□□□□ -0.35
SIN3A-203ENST00000394949 COX7CP15954 63 aa12.86□□□□□ -0.35
SIN3A-203ENST00000394949 POLR2KP53803 58 aaKnown RBP12.86□□□□□ -0.35
SIN3A-203ENST00000394949 PCDH15Q96QU1 1955 aa12.85□□□□□ -0.35
SIN3A-203ENST00000394949 LINC01548A6NM66 108 aa12.85□□□□□ -0.35
SIN3A-203ENST00000394949 CCDC179H3BU77 68 aa12.85□□□□□ -0.35
SIN3A-203ENST00000394949 DEFB135Q30KP9 77 aa12.85□□□□□ -0.35
SIN3A-203ENST00000394949 NDUFS5O43920 106 aa12.85□□□□□ -0.35
SIN3A-203ENST00000394949 NUP210LQ5VU65 1888 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms