RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 NAT8Q9UHE5 227 aa12.72□□□□□ -0.37
UPK3B-203ENST00000394849 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.71□□□□□ -0.37
UPK3B-203ENST00000394849 NEXN-AS1Q8NBZ9 246 aa12.71□□□□□ -0.37
UPK3B-203ENST00000394849 GTSF1Q8WW33 167 aa12.71□□□□□ -0.37
UPK3B-203ENST00000394849 BORCS7Q96B45 105 aa12.71□□□□□ -0.37
UPK3B-203ENST00000394849 PGLYRP4Q96LB8 373 aa12.71□□□□□ -0.37
UPK3B-203ENST00000394849 DPH3P1Q9H4G8 78 aa12.71□□□□□ -0.37
UPK3B-203ENST00000394849 RNF213Q63HN8 5207 aa12.7□□□□□ -0.38
UPK3B-203ENST00000394849 H7C1H1 209 aa12.7□□□□□ -0.38
UPK3B-203ENST00000394849 UBE2D3P61077 147 aa12.7□□□□□ -0.38
UPK3B-203ENST00000394849 RPL23P62829 140 aaKnown RBP12.7□□□□□ -0.38
UPK3B-203ENST00000394849 UBE2D2P62837 147 aa12.7□□□□□ -0.38
UPK3B-203ENST00000394849 SMIM15Q7Z3B0 74 aa12.7□□□□□ -0.38
UPK3B-203ENST00000394849 OR10G8Q8NGN5 311 aa12.7□□□□□ -0.38
UPK3B-203ENST00000394849 ISOC2Q96AB3 205 aa12.7□□□□□ -0.38
UPK3B-203ENST00000394849 CNFNQ9BYD5 112 aa12.7□□□□□ -0.38
UPK3B-203ENST00000394849 C9orf163Q8N9P6 203 aa12.69□□□□□ -0.38
UPK3B-203ENST00000394849 TSKUQ8WUA8 353 aa12.69□□□□□ -0.38
UPK3B-203ENST00000394849 CRPP02741 224 aa12.68□□□□□ -0.38
UPK3B-203ENST00000394849 SUMO4Q6EEV6 95 aa12.68□□□□□ -0.38
UPK3B-203ENST00000394849 USP17L23D6RBM5 183 aa12.67□□□□□ -0.38
UPK3B-203ENST00000394849 CLLU1Q5K131 121 aa12.67□□□□□ -0.38
UPK3B-203ENST00000394849 GFRA4Q9GZZ7 299 aa12.67□□□□□ -0.38
UPK3B-203ENST00000394849 LRP2P98164 4655 aa12.67□□□□□ -0.38
UPK3B-203ENST00000394849 HIGD1CA8MV81 97 aa12.66□□□□□ -0.38
UPK3B-203ENST00000394849 FOXA3P55318 350 aaPredicted RBP12.66□□□□□ -0.38
UPK3B-203ENST00000394849 PKIAP61925 76 aa12.66□□□□□ -0.38
UPK3B-203ENST00000394849 V9GYV3 84 aa12.66□□□□□ -0.38
UPK3B-203ENST00000394849 FAM231BA6NCW3 169 aa12.65□□□□□ -0.38
UPK3B-203ENST00000394849 TMEM262E9PQX1 116 aa12.65□□□□□ -0.38
UPK3B-203ENST00000394849 M0QY20 66 aa12.65□□□□□ -0.38
UPK3B-203ENST00000394849 RASL11AQ6T310 242 aa12.65□□□□□ -0.38
UPK3B-203ENST00000394849 ENHOQ6UWT2 76 aa12.65□□□□□ -0.38
UPK3B-203ENST00000394849 A0A1B0GUT8 65 aa12.64□□□□□ -0.39
UPK3B-203ENST00000394849 MIAQ16674 131 aa12.64□□□□□ -0.39
UPK3B-203ENST00000394849 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.64□□□□□ -0.39
UPK3B-203ENST00000394849 PRSS1P07477 247 aa12.63□□□□□ -0.39
UPK3B-203ENST00000394849 IFITM2Q01629 132 aa12.63□□□□□ -0.39
UPK3B-203ENST00000394849 TRBV6-8A0A0A6YYG3 113 aa12.62□□□□□ -0.39
UPK3B-203ENST00000394849 HLA-DQA1P01909 254 aa12.62□□□□□ -0.39
UPK3B-203ENST00000394849 TMEM97Q5BJF2 176 aa12.62□□□□□ -0.39
UPK3B-203ENST00000394849 SDIM1Q6ZPB5 146 aa12.62□□□□□ -0.39
UPK3B-203ENST00000394849 CLRN3Q8NCR9 226 aa12.62□□□□□ -0.39
UPK3B-203ENST00000394849 ANGP03950 147 aaKnown RBP12.61□□□□□ -0.39
UPK3B-203ENST00000394849 NIT2Q9NQR4 276 aa12.61□□□□□ -0.39
UPK3B-203ENST00000394849 NAT8BQ9UHF3 227 aa12.61□□□□□ -0.39
UPK3B-203ENST00000394849 RIGQ13278 110 aa12.6□□□□□ -0.39
UPK3B-203ENST00000394849 CIRBPQ14011 172 aaKnown RBP12.6□□□□□ -0.39
UPK3B-203ENST00000394849 NUP35Q8NFH5 326 aa12.6□□□□□ -0.39
UPK3B-203ENST00000394849 RNF185Q96GF1 192 aa12.6□□□□□ -0.39
UPK3B-203ENST00000394849 TRAV26-2A0A0B4J265 109 aa12.59□□□□□ -0.39
UPK3B-203ENST00000394849 GATD1Q8NB37 220 aa12.59□□□□□ -0.39
UPK3B-203ENST00000394849 CHCHD5Q9BSY4 110 aa12.59□□□□□ -0.39
UPK3B-203ENST00000394849 TNXBP22105 4242 aa12.58□□□□□ -0.39
UPK3B-203ENST00000394849 MPV17L2Q567V2 206 aa12.58□□□□□ -0.4
UPK3B-203ENST00000394849 TRBV25-1A0A075B6N4 114 aa12.57□□□□□ -0.4
UPK3B-203ENST00000394849 PANO1I0J062 215 aa12.57□□□□□ -0.4
UPK3B-203ENST00000394849 PNRC1Q12796 327 aaPredicted RBP12.57□□□□□ -0.4
UPK3B-203ENST00000394849 TMEM191AQ9H0A3 160 aa12.57□□□□□ -0.4
UPK3B-203ENST00000394849 SMIM27A0A1W2PRY6 76 aa12.56□□□□□ -0.4
UPK3B-203ENST00000394849 CNBPP62633 177 aaKnown RBP12.56□□□□□ -0.4
UPK3B-203ENST00000394849 NTM-AS1Q6ZSK4 140 aa12.56□□□□□ -0.4
UPK3B-203ENST00000394849 DPH3Q96FX2 82 aa12.56□□□□□ -0.4
UPK3B-203ENST00000394849 PRR34Q9NV39 138 aa12.56□□□□□ -0.4
UPK3B-203ENST00000394849 IGHV1-24A0A0C4DH33 117 aa12.55□□□□□ -0.4
UPK3B-203ENST00000394849 PPP1R2P9O14990 202 aa12.55□□□□□ -0.4
UPK3B-203ENST00000394849 UQCC3Q6UW78 93 aa12.55□□□□□ -0.4
UPK3B-203ENST00000394849 RPL39LQ96EH5 51 aaKnown RBP12.55□□□□□ -0.4
UPK3B-203ENST00000394849 COTL1Q14019 142 aa12.54□□□□□ -0.4
UPK3B-203ENST00000394849 AMN1Q8IY45 258 aa12.54□□□□□ -0.4
UPK3B-203ENST00000394849 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.53□□□□□ -0.4
UPK3B-203ENST00000394849 GAGE6Q13070 117 aa12.53□□□□□ -0.4
UPK3B-203ENST00000394849 IQCJQ1A5X6 159 aa12.53□□□□□ -0.4
UPK3B-203ENST00000394849 LINC01600Q96MT4 127 aa12.53□□□□□ -0.4
UPK3B-203ENST00000394849 IGHV3-64A0A075B6Q5 118 aa12.52□□□□□ -0.41
UPK3B-203ENST00000394849 CAMPP49913 170 aa12.52□□□□□ -0.41
UPK3B-203ENST00000394849 C7orf33Q8WU49 177 aa12.52□□□□□ -0.41
UPK3B-203ENST00000394849 TMEM243Q9BU79 118 aa12.52□□□□□ -0.41
UPK3B-203ENST00000394849 A0A087WYN8 130 aa12.51□□□□□ -0.41
UPK3B-203ENST00000394849 A0A1B0GW15 77 aa12.51□□□□□ -0.41
UPK3B-203ENST00000394849 MT-ND4LP03901 98 aa12.51□□□□□ -0.41
UPK3B-203ENST00000394849 RAB4AP20338 218 aa12.51□□□□□ -0.41
UPK3B-203ENST00000394849 AMTP48728 403 aa12.51□□□□□ -0.41
UPK3B-203ENST00000394849 MRPL54Q6P161 138 aaKnown RBP12.51□□□□□ -0.41
UPK3B-203ENST00000394849 KRTAP26-1Q6PEX3 210 aa12.51□□□□□ -0.41
UPK3B-203ENST00000394849 COMMD7Q86VX2 200 aa12.51□□□□□ -0.41
UPK3B-203ENST00000394849 MRAP2Q96G30 205 aa12.51□□□□□ -0.41
UPK3B-203ENST00000394849 AP5S1Q9NUS5 200 aa12.51□□□□□ -0.41
UPK3B-203ENST00000394849 SDHAF1A6NFY7 115 aa12.5□□□□□ -0.41
UPK3B-203ENST00000394849 F8W036 122 aa12.5□□□□□ -0.41
UPK3B-203ENST00000394849 S100A8P05109 93 aa12.5□□□□□ -0.41
UPK3B-203ENST00000394849 ANAPC16Q96DE5 110 aa12.5□□□□□ -0.41
UPK3B-203ENST00000394849 hDV102S1A0JD36 115 aa12.49□□□□□ -0.41
UPK3B-203ENST00000394849 TMEM218A2RU14 115 aa12.49□□□□□ -0.41
UPK3B-203ENST00000394849 UBE2L6O14933 153 aa12.49□□□□□ -0.41
UPK3B-203ENST00000394849 LINC00269Q8N2A0 174 aa12.49□□□□□ -0.41
UPK3B-203ENST00000394849 ST20Q9HBF5 79 aa12.49□□□□□ -0.41
UPK3B-203ENST00000394849 TRBV6-5A0A0K0K1A5 114 aa12.48□□□□□ -0.41
UPK3B-203ENST00000394849 PMCHP20382 165 aa12.48□□□□□ -0.41
UPK3B-203ENST00000394849 RBX1P62877 108 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms