RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 RNASE4P34096 147 aaKnown RBP10.89□□□□□ -0.67
VPS9D1-201ENST00000389386 LY6G5BQ8NDX9 201 aa10.89□□□□□ -0.67
VPS9D1-201ENST00000389386 CCDC140Q96MF4 163 aa10.89□□□□□ -0.67
VPS9D1-201ENST00000389386 TRAV8-3A0A0A6YYJ7 113 aa10.89□□□□□ -0.67
VPS9D1-201ENST00000389386 ATP5G1P05496 136 aa10.89□□□□□ -0.67
VPS9D1-201ENST00000389386 IGHV3-30-3P0DP02 117 aa10.89□□□□□ -0.67
VPS9D1-201ENST00000389386 EEF1AKMT3Q96AZ1 226 aa10.89□□□□□ -0.67
VPS9D1-201ENST00000389386 RPS28P62857 69 aaKnown RBP10.88□□□□□ -0.67
VPS9D1-201ENST00000389386 DCANP1Q8TF63 244 aa10.88□□□□□ -0.67
VPS9D1-201ENST00000389386 SPANXCQ9NY87 97 aa10.88□□□□□ -0.67
VPS9D1-201ENST00000389386 USP9YO00507 2555 aaPredicted RBP10.88□□□□□ -0.67
VPS9D1-201ENST00000389386 TRBV6-5A0A0K0K1A5 114 aa10.88□□□□□ -0.67
VPS9D1-201ENST00000389386 C9orf139Q6ZV77 190 aa10.88□□□□□ -0.67
VPS9D1-201ENST00000389386 VMO1Q7Z5L0 202 aa10.88□□□□□ -0.67
VPS9D1-201ENST00000389386 FAM110DQ8TAY7 271 aaPredicted RBP10.88□□□□□ -0.67
VPS9D1-201ENST00000389386 ABCA12Q86UK0 2595 aa10.88□□□□□ -0.67
VPS9D1-201ENST00000389386 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.88□□□□□ -0.676e-7■■■■□ 20.3
VPS9D1-201ENST00000389386 DEFB1P60022 68 aa10.87□□□□□ -0.67
VPS9D1-201ENST00000389386 TENM4Q6N022 2769 aa10.87□□□□□ -0.67
VPS9D1-201ENST00000389386 PRRC2AP48634 2157 aaKnown RBP10.87□□□□□ -0.67
VPS9D1-201ENST00000389386 A0A087WWL8 130 aa10.87□□□□□ -0.67
VPS9D1-201ENST00000389386 ODF3BA8MYP8 253 aa10.87□□□□□ -0.67
VPS9D1-201ENST00000389386 F5H697 171 aa10.87□□□□□ -0.67
VPS9D1-201ENST00000389386 SDIM1Q6ZPB5 146 aa10.87□□□□□ -0.67
VPS9D1-201ENST00000389386 COX7CP15954 63 aa10.86□□□□□ -0.67
VPS9D1-201ENST00000389386 KLK9Q2XQG4 91 aa10.86□□□□□ -0.67
VPS9D1-201ENST00000389386 NSUN5P1Q3KNT7 163 aa10.86□□□□□ -0.67
VPS9D1-201ENST00000389386 TMEM61Q8N0U2 210 aa10.86□□□□□ -0.67
VPS9D1-201ENST00000389386 FAM19A4Q96LR4 140 aa10.86□□□□□ -0.67
VPS9D1-201ENST00000389386 KLK9Q9UKQ9 250 aa10.86□□□□□ -0.67
VPS9D1-201ENST00000389386 KMT2BQ9UMN6 2715 aaPredicted RBP10.86□□□□□ -0.67
VPS9D1-201ENST00000389386 MIAQ16674 131 aa10.86□□□□□ -0.67
VPS9D1-201ENST00000389386 C5orf38Q86SI9 138 aa10.86□□□□□ -0.67
VPS9D1-201ENST00000389386 C2orf48Q96LS8 159 aa10.86□□□□□ -0.67
VPS9D1-201ENST00000389386 OVOL1O14753 267 aa10.86□□□□□ -0.67
VPS9D1-201ENST00000389386 RHOHQ15669 191 aa10.86□□□□□ -0.67
VPS9D1-201ENST00000389386 APRG1Q8IVJ8 170 aa10.86□□□□□ -0.67
VPS9D1-201ENST00000389386 PTPN13Q12923 2485 aa10.85□□□□□ -0.67
VPS9D1-201ENST00000389386 DOPEY2Q9Y3R5 2298 aa10.85□□□□□ -0.67
VPS9D1-201ENST00000389386 TMEM219Q86XT9 240 aa10.85□□□□□ -0.67
VPS9D1-201ENST00000389386 DUX5Q96PT3 197 aa10.85□□□□□ -0.67
VPS9D1-201ENST00000389386 TIMM21Q9BVV7 248 aa10.85□□□□□ -0.67
VPS9D1-201ENST00000389386 HELZ2Q9BYK8 2649 aaKnown RBP10.85□□□□□ -0.67
VPS9D1-201ENST00000389386 CRYGAP11844 174 aa10.85□□□□□ -0.67
VPS9D1-201ENST00000389386 ECSCRQ19T08 205 aa10.85□□□□□ -0.67
VPS9D1-201ENST00000389386 GAGE2AQ6NT46 116 aa10.85□□□□□ -0.67
VPS9D1-201ENST00000389386 ABCA2Q9BZC7 2435 aa10.84□□□□□ -0.67
VPS9D1-201ENST00000389386 IGLV4-3A0A075B6K6 122 aa10.84□□□□□ -0.67
VPS9D1-201ENST00000389386 CXCL5P42830 114 aa10.84□□□□□ -0.67
VPS9D1-201ENST00000389386 NPC2P61916 151 aa10.84□□□□□ -0.67
VPS9D1-201ENST00000389386 Q8N9W7 124 aa10.84□□□□□ -0.67
VPS9D1-201ENST00000389386 C20orf203Q8NBC4 194 aa10.84□□□□□ -0.67
VPS9D1-201ENST00000389386 CSPG4Q6UVK1 2322 aa10.84□□□□□ -0.67
VPS9D1-201ENST00000389386 FBN2P35556 2912 aa10.83□□□□□ -0.68
VPS9D1-201ENST00000389386 NDUFA12Q9UI09 145 aa10.83□□□□□ -0.68
VPS9D1-201ENST00000389386 KIR2DL5BQ8NHK3 375 aa10.82□□□□□ -0.68
VPS9D1-201ENST00000389386 BPESC1Q9GZL8 116 aa10.82□□□□□ -0.68
VPS9D1-201ENST00000389386 NBPF19A0A087WUL8 3843 aa10.82□□□□□ -0.68
VPS9D1-201ENST00000389386 TRAV41A0A0B4J266 112 aa10.82□□□□□ -0.68
VPS9D1-201ENST00000389386 IGHV3OR16-10A0A075B7F0 116 aa10.81□□□□□ -0.68
VPS9D1-201ENST00000389386 F6UB75 175 aa10.81□□□□□ -0.68
VPS9D1-201ENST00000389386 SOCS3O14543 225 aa10.81□□□□□ -0.68
VPS9D1-201ENST00000389386 M0QY20 66 aa10.81□□□□□ -0.68
VPS9D1-201ENST00000389386 ATP6V0E1O15342 81 aa10.81□□□□□ -0.68
VPS9D1-201ENST00000389386 C4orf26Q17RF5 130 aa10.81□□□□□ -0.68
VPS9D1-201ENST00000389386 TRBV7-1A0A0A6YYK4 115 aa10.8□□□□□ -0.68
VPS9D1-201ENST00000389386 IGHV1-58A0A0C4DH39 117 aa10.8□□□□□ -0.68
VPS9D1-201ENST00000389386 HIST1H4AP62805 103 aaKnown RBP10.8□□□□□ -0.68
VPS9D1-201ENST00000389386 PEMTQ9UBM1 199 aa10.8□□□□□ -0.68
VPS9D1-201ENST00000389386 M0R1W7 72 aa10.8□□□□□ -0.68
VPS9D1-201ENST00000389386 G3V318 75 aa10.79□□□□□ -0.68
VPS9D1-201ENST00000389386 RPL11P62913 178 aaKnown RBP10.79□□□□□ -0.68
VPS9D1-201ENST00000389386 MRPS36P82909 103 aaKnown RBP10.79□□□□□ -0.68
VPS9D1-201ENST00000389386 FAM74A4Q5TZK3 123 aa10.79□□□□□ -0.68
VPS9D1-201ENST00000389386 hADV29S1A0JD25 119 aa10.79□□□□□ -0.68
VPS9D1-201ENST00000389386 MRAPQ8TCY5 172 aa10.79□□□□□ -0.68
VPS9D1-201ENST00000389386 FAM104AQ969W3 186 aa10.79□□□□□ -0.68
VPS9D1-201ENST00000389386 CYSTM1Q9H1C7 97 aa10.78□□□□□ -0.68
VPS9D1-201ENST00000389386 HRCT1Q6UXD1 115 aa10.78□□□□□ -0.68
VPS9D1-201ENST00000389386 VSIG2Q96IQ7 327 aa10.78□□□□□ -0.68
VPS9D1-201ENST00000389386 ANKRD17O75179 2603 aaKnown RBP10.78□□□□□ -0.68
VPS9D1-201ENST00000389386 ZANQ9Y493 2812 aa10.78□□□□□ -0.68
VPS9D1-201ENST00000389386 A8MZ25 164 aa10.78□□□□□ -0.68
VPS9D1-201ENST00000389386 DAZ2Q13117 558 aaKnown RBP10.78□□□□□ -0.68
VPS9D1-201ENST00000389386 DAZ4Q86SG3 579 aaKnown RBP10.78□□□□□ -0.68
VPS9D1-201ENST00000389386 DAZ1Q9NQZ3 744 aaKnown RBP10.78□□□□□ -0.68
VPS9D1-201ENST00000389386 DAZ3Q9NR90 486 aaKnown RBP10.78□□□□□ -0.68
VPS9D1-201ENST00000389386 ATOX1O00244 68 aa10.77□□□□□ -0.69
VPS9D1-201ENST00000389386 F8WDY8 70 aa10.77□□□□□ -0.69
VPS9D1-201ENST00000389386 COX7A2LO14548 114 aa10.77□□□□□ -0.69
VPS9D1-201ENST00000389386 SIRPDQ9H106 197 aa10.77□□□□□ -0.69
VPS9D1-201ENST00000389386 KLLNB2CW77 178 aa10.76□□□□□ -0.69
VPS9D1-201ENST00000389386 TIMM17BO60830 172 aa10.76□□□□□ -0.69
VPS9D1-201ENST00000389386 MINOS1Q5TGZ0 78 aa10.76□□□□□ -0.69
VPS9D1-201ENST00000389386 DAND5Q8N907 189 aa10.76□□□□□ -0.69
VPS9D1-201ENST00000389386 PIMREGQ9BSJ6 248 aa10.76□□□□□ -0.69
VPS9D1-201ENST00000389386 C22orf24Q9Y442 160 aa10.76□□□□□ -0.69
VPS9D1-201ENST00000389386 TRACP01848 142 aa10.76□□□□□ -0.69
VPS9D1-201ENST00000389386 DPH3Q96FX2 82 aa10.76□□□□□ -0.69
VPS9D1-201ENST00000389386 FASNP49327 2511 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms