RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 SLURP1P55000 103 aa9.85□□□□□ -0.83
TRAPPC9-201ENST00000389328 MIAQ16674 131 aa9.85□□□□□ -0.83
TRAPPC9-201ENST00000389328 PTPRBP23467 1997 aa9.85□□□□□ -0.83
TRAPPC9-201ENST00000389328 IGLV2-18A0A075B6J9 118 aa9.85□□□□□ -0.83
TRAPPC9-201ENST00000389328 IGHV4-4A0A075B6R2 117 aa9.85□□□□□ -0.83
TRAPPC9-201ENST00000389328 LINC01356Q8N9X3 169 aa9.85□□□□□ -0.83
TRAPPC9-201ENST00000389328 VSIG2Q96IQ7 327 aa9.85□□□□□ -0.83
TRAPPC9-201ENST00000389328 DNAJC30Q96LL9 226 aa9.85□□□□□ -0.83
TRAPPC9-201ENST00000389328 RNF223E7ERA6 249 aa9.85□□□□□ -0.83
TRAPPC9-201ENST00000389328 TRACP01848 142 aa9.85□□□□□ -0.83
TRAPPC9-201ENST00000389328 Q8N6K4 173 aa9.85□□□□□ -0.83
TRAPPC9-201ENST00000389328 TRANK1O15050 2925 aa9.84□□□□□ -0.83
TRAPPC9-201ENST00000389328 UBE2D1P51668 147 aa9.84□□□□□ -0.83
TRAPPC9-201ENST00000389328 M0QY20 66 aa9.84□□□□□ -0.83
TRAPPC9-201ENST00000389328 CRIP2P52943 208 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC9-201ENST00000389328 LMO4P61968 165 aa9.84□□□□□ -0.83
TRAPPC9-201ENST00000389328 C5orf38Q86SI9 138 aa9.84□□□□□ -0.83
TRAPPC9-201ENST00000389328 Q9HAA7 133 aa9.84□□□□□ -0.83
TRAPPC9-201ENST00000389328 POLR2KP53803 58 aaKnown RBP9.84□□□□□ -0.83
TRAPPC9-201ENST00000389328 IGHV4-30-2A0A087WSY4 118 aa9.83□□□□□ -0.84
TRAPPC9-201ENST00000389328 CDKN2A-AS1Q9UH64 79 aa9.83□□□□□ -0.84
TRAPPC9-201ENST00000389328 CCDC179H3BU77 68 aa9.83□□□□□ -0.84
TRAPPC9-201ENST00000389328 K7EMT4 169 aa9.83□□□□□ -0.84
TRAPPC9-201ENST00000389328 SND1-IT1Q9HBX3 110 aa9.83□□□□□ -0.84
TRAPPC9-201ENST00000389328 IGHV4OR15-8A0A075B7B6 117 aa9.83□□□□□ -0.84
TRAPPC9-201ENST00000389328 A0A087WW49 117 aa9.83□□□□□ -0.84
TRAPPC9-201ENST00000389328 TRBV27A0A0K0K1C4 114 aa9.83□□□□□ -0.84
TRAPPC9-201ENST00000389328 PROK1P58294 105 aa9.83□□□□□ -0.84
TRAPPC9-201ENST00000389328 MRPL23Q16540 153 aaKnown RBP9.83□□□□□ -0.84
TRAPPC9-201ENST00000389328 NOP10Q9NPE3 64 aaKnown RBP9.83□□□□□ -0.84
TRAPPC9-201ENST00000389328 NSUN5P1Q3KNT7 163 aa9.82□□□□□ -0.84
TRAPPC9-201ENST00000389328 CLPSL2Q6UWE3 100 aa9.82□□□□□ -0.84
TRAPPC9-201ENST00000389328 ELANEP08246 267 aa9.82□□□□□ -0.84
TRAPPC9-201ENST00000389328 COX8CQ7Z4L0 72 aa9.82□□□□□ -0.84
TRAPPC9-201ENST00000389328 DSCR9P59020 149 aa9.82□□□□□ -0.84
TRAPPC9-201ENST00000389328 TSPEAR-AS2P59090 65 aa9.82□□□□□ -0.84
TRAPPC9-201ENST00000389328 GPHB5Q86YW7 130 aa9.82□□□□□ -0.84
TRAPPC9-201ENST00000389328 TMEM126AQ9H061 195 aa9.82□□□□□ -0.84
TRAPPC9-201ENST00000389328 FBXL19-AS1Q494R0 122 aa9.82□□□□□ -0.84
TRAPPC9-201ENST00000389328 IGIPA6NJ69 53 aa9.81□□□□□ -0.84
TRAPPC9-201ENST00000389328 SS18Q15532 418 aa9.81□□□□□ -0.84
TRAPPC9-201ENST00000389328 HAMPP81172 84 aa9.81□□□□□ -0.84
TRAPPC9-201ENST00000389328 A0A1B0GX51 115 aa9.81□□□□□ -0.84
TRAPPC9-201ENST00000389328 A0A096LPF7 62 aa9.8□□□□□ -0.84
TRAPPC9-201ENST00000389328 TRBV30A0A0K0K1B3 111 aa9.8□□□□□ -0.84
TRAPPC9-201ENST00000389328 PSMG3-AS1Q96PY0 264 aa9.8□□□□□ -0.84
TRAPPC9-201ENST00000389328 GATA3P23771 443 aa9.8□□□□□ -0.84
TRAPPC9-201ENST00000389328 UBE2D3P61077 147 aa9.8□□□□□ -0.84
TRAPPC9-201ENST00000389328 UBE2D2P62837 147 aa9.8□□□□□ -0.84
TRAPPC9-201ENST00000389328 UBL5Q9BZL1 73 aa9.8□□□□□ -0.84
TRAPPC9-201ENST00000389328 VCANP13611 3396 aa9.79□□□□□ -0.84
TRAPPC9-201ENST00000389328 XCL1P47992 114 aa9.79□□□□□ -0.84
TRAPPC9-201ENST00000389328 ABCA12Q86UK0 2595 aa9.79□□□□□ -0.84
TRAPPC9-201ENST00000389328 IGLV4-69A0A075B6H9 119 aa9.79□□□□□ -0.84
TRAPPC9-201ENST00000389328 TMEM263Q8WUH6 116 aaKnown RBP9.79□□□□□ -0.84
TRAPPC9-201ENST00000389328 LINC00467Q9BRT7 94 aa9.79□□□□□ -0.84
TRAPPC9-201ENST00000389328 PRO3102Q9H379 93 aa9.79□□□□□ -0.84
TRAPPC9-201ENST00000389328 RAI1Q7Z5J4 1906 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC9-201ENST00000389328 SPANXDQ9BXN6 97 aa9.79□□□□□ -0.84
TRAPPC9-201ENST00000389328 NBL1P41271 181 aa9.78□□□□□ -0.84
TRAPPC9-201ENST00000389328 TSHBP01222 138 aa9.78□□□□□ -0.84
TRAPPC9-201ENST00000389328 DAZ2Q13117 558 aaKnown RBP9.78□□□□□ -0.84
TRAPPC9-201ENST00000389328 DAZ4Q86SG3 579 aaKnown RBP9.78□□□□□ -0.84
TRAPPC9-201ENST00000389328 MIR7-3HGQ8N6C7 128 aa9.78□□□□□ -0.84
TRAPPC9-201ENST00000389328 DAZ3Q9NR90 486 aaKnown RBP9.78□□□□□ -0.84
TRAPPC9-201ENST00000389328 LECT2O14960 151 aa9.78□□□□□ -0.84
TRAPPC9-201ENST00000389328 PRM2P04554 102 aa9.78□□□□□ -0.84
TRAPPC9-201ENST00000389328 LINC00643Q86TS7 51 aa9.78□□□□□ -0.84
TRAPPC9-201ENST00000389328 CDIP1Q9H305 208 aa9.78□□□□□ -0.84
TRAPPC9-201ENST00000389328 CRLF1O75462 422 aa9.77□□□□□ -0.85
TRAPPC9-201ENST00000389328 C10orf99Q6UWK7 81 aa9.77□□□□□ -0.85
TRAPPC9-201ENST00000389328 A6NDX4 124 aa9.77□□□□□ -0.85
TRAPPC9-201ENST00000389328 NRGNQ92686 78 aa9.77□□□□□ -0.85
TRAPPC9-201ENST00000389328 ZNF580Q9UK33 172 aa9.77□□□□□ -0.85
TRAPPC9-201ENST00000389328 TRBV6-5A0A0K0K1A5 114 aa9.77□□□□□ -0.85
TRAPPC9-201ENST00000389328 Q6ZSV7 163 aa9.77□□□□□ -0.85
TRAPPC9-201ENST00000389328 TMEM61Q8N0U2 210 aa9.77□□□□□ -0.85
TRAPPC9-201ENST00000389328 COX7A2LO14548 114 aa9.76□□□□□ -0.85
TRAPPC9-201ENST00000389328 CRYGDP07320 174 aa9.76□□□□□ -0.85
TRAPPC9-201ENST00000389328 VPREB3Q9UKI3 123 aa9.76□□□□□ -0.85
TRAPPC9-201ENST00000389328 ATP5G1P05496 136 aa9.76□□□□□ -0.85
TRAPPC9-201ENST00000389328 C14orf132Q9NPU4 83 aa9.76□□□□□ -0.85
TRAPPC9-201ENST00000389328 K7EQG2 157 aa9.76□□□□□ -0.85
TRAPPC9-201ENST00000389328 ATOX1O00244 68 aa9.76□□□□□ -0.85
TRAPPC9-201ENST00000389328 VPS13AQ96RL7 3174 aa9.75□□□□□ -0.85
TRAPPC9-201ENST00000389328 CDSNQ15517 529 aa9.75□□□□□ -0.85
TRAPPC9-201ENST00000389328 C10orf105Q8TEF2 133 aa9.75□□□□□ -0.85
TRAPPC9-201ENST00000389328 ORMDL1Q9P0S3 153 aa9.75□□□□□ -0.85
TRAPPC9-201ENST00000389328 KLLNB2CW77 178 aa9.75□□□□□ -0.85
TRAPPC9-201ENST00000389328 H7C423 109 aa9.75□□□□□ -0.85
TRAPPC9-201ENST00000389328 EDN2P20800 178 aa9.75□□□□□ -0.85
TRAPPC9-201ENST00000389328 LINC00308Q8TCZ7 52 aa9.75□□□□□ -0.85
TRAPPC9-201ENST00000389328 SMCPP49901 116 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC9-201ENST00000389328 RPL32P62910 135 aaKnown RBP9.75□□□□□ -0.85
TRAPPC9-201ENST00000389328 PIK3CD-AS1Q5SR53 167 aa9.75□□□□□ -0.85
TRAPPC9-201ENST00000389328 COX7B2Q8TF08 81 aa9.75□□□□□ -0.85
TRAPPC9-201ENST00000389328 LAMA1P25391 3075 aa9.75□□□□□ -0.85
TRAPPC9-201ENST00000389328 K7EQD1 137 aa9.74□□□□□ -0.85
TRAPPC9-201ENST00000389328 C11orf71Q6IPW1 123 aa9.74□□□□□ -0.85
TRAPPC9-201ENST00000389328 H0YGX0 51 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms