RNA–Protein interactions for RNA: ENST00000383888.1

RNU6-338P-201, Transcript of RNA, U6 small nuclear 338, pseudogene, humanhuman

BASIC

Gene RNU6-338P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-338P-201ENST00000383888 M0R135 149 aa0.85□□□□□ -2.27
RNU6-338P-201ENST00000383888 HMGN2P05204 90 aaKnown RBP0.85□□□□□ -2.27
RNU6-338P-201ENST00000383888 RNASE3P12724 160 aaKnown RBP0.85□□□□□ -2.27
RNU6-338P-201ENST00000383888 CCL3L1P16619 93 aa0.85□□□□□ -2.27
RNU6-338P-201ENST00000383888 CLIP1P30622 1438 aa0.85□□□□□ -2.27
RNU6-338P-201ENST00000383888 EFNA4P52798 201 aa0.85□□□□□ -2.27
RNU6-338P-201ENST00000383888 KLKP1Q107X0 134 aa0.85□□□□□ -2.27
RNU6-338P-201ENST00000383888 FXYD3Q14802 87 aa0.85□□□□□ -2.27
RNU6-338P-201ENST00000383888 PLGLAQ15195 96 aa0.85□□□□□ -2.27
RNU6-338P-201ENST00000383888 COL24A1Q17RW2 1714 aa0.85□□□□□ -2.27
RNU6-338P-201ENST00000383888 HCP5Q6MZN7 132 aa0.85□□□□□ -2.27
RNU6-338P-201ENST00000383888 ANKARQ7Z5J8 1434 aa0.85□□□□□ -2.27
RNU6-338P-201ENST00000383888 Q86TA4 180 aa0.85□□□□□ -2.27
RNU6-338P-201ENST00000383888 BAGE2Q86Y30 109 aa0.85□□□□□ -2.27
RNU6-338P-201ENST00000383888 FDCSPQ8NFU4 85 aa0.85□□□□□ -2.27
RNU6-338P-201ENST00000383888 LINC00208Q96KT6 92 aa0.85□□□□□ -2.27
RNU6-338P-201ENST00000383888 CDC42SE2Q9NRR3 84 aa0.85□□□□□ -2.27
RNU6-338P-201ENST00000383888 SMARCA4P51532 1647 aa0.85□□□□□ -2.27
RNU6-338P-201ENST00000383888 ATP10BO94823 1461 aa0.85□□□□□ -2.27
RNU6-338P-201ENST00000383888 MAGI2Q86UL8 1455 aa0.85□□□□□ -2.27
RNU6-338P-201ENST00000383888 NLRP1Q9C000 1473 aa0.85□□□□□ -2.27
RNU6-338P-201ENST00000383888 TENM1Q9UKZ4 2725 aa0.85□□□□□ -2.27
RNU6-338P-201ENST00000383888 EPRSP07814 1512 aaKnown RBP0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 MYO9BQ13459 2157 aa0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 SDK2Q58EX2 2172 aa0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 CHD3Q12873 2000 aaKnown RBP0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 MICAL3Q7RTP6 2002 aa0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 BCORL1Q5H9F3 1711 aa0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 ANKRD26Q9UPS8 1709 aa0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 MARF1Q9Y4F3 1742 aaKnown RBP0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 AKAP11Q9UKA4 1901 aa0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 IGKV2-40A0A087WW87 121 aaPredicted RBP0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 IGKV3D-7A0A0C4DH55 119 aa0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 IGKV3OR2-268A0A0C4DH90 116 aa0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 CLPSL1A2RUU4 121 aa0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 H3BVH4 76 aa0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 UQCR11O14957 56 aa0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 INE1O15225 51 aa0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 IGKV2D-40P01614 121 aaPredicted RBP0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 IGKV4-1P06312 121 aa0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 ARMS2P0C7Q2 107 aa0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 CAV3P56539 151 aa0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 GNGT1P63211 74 aa0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 GDF5OSQ5U4N7 250 aa0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 XAF1Q6GPH4 301 aa0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 BAGE3Q86Y29 109 aa0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 C5orf56Q8N8D9 126 aa0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 GNG13Q9P2W3 67 aa0.84□□□□□ -2.27
RNU6-338P-201ENST00000383888 MCM3APO60318 1980 aa0.84□□□□□ -2.28
RNU6-338P-201ENST00000383888 SHANK2Q9UPX8 1470 aa0.84□□□□□ -2.28
RNU6-338P-201ENST00000383888 COL11A1P12107 1806 aaPredicted RBP0.84□□□□□ -2.28
RNU6-338P-201ENST00000383888 RP1P56715 2156 aa0.84□□□□□ -2.28
RNU6-338P-201ENST00000383888 MUC4Q99102 2169 aa0.84□□□□□ -2.28
RNU6-338P-201ENST00000383888 COL27A1Q8IZC6 1860 aaPredicted RBP0.84□□□□□ -2.28
RNU6-338P-201ENST00000383888 TRPM7Q96QT4 1865 aa0.84□□□□□ -2.28
RNU6-338P-201ENST00000383888 MYOFQ9NZM1 2061 aa0.84□□□□□ -2.28
RNU6-338P-201ENST00000383888 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.84□□□□□ -2.28
RNU6-338P-201ENST00000383888 SNRNP200O75643 2136 aaKnown RBP0.83□□□□□ -2.28
RNU6-338P-201ENST00000383888 DNMBPQ6XZF7 1577 aa0.83□□□□□ -2.28
RNU6-338P-201ENST00000383888 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.83□□□□□ -2.28
RNU6-338P-201ENST00000383888 TRGV1A0A0A0MS02 117 aa0.83□□□□□ -2.28
RNU6-338P-201ENST00000383888 J3QRE1 110 aa0.83□□□□□ -2.28
RNU6-338P-201ENST00000383888 M0R2N4 97 aa0.83□□□□□ -2.28
RNU6-338P-201ENST00000383888 MGPP08493 103 aa0.83□□□□□ -2.28
RNU6-338P-201ENST00000383888 BRD3OSQ6XYD6 125 aa0.83□□□□□ -2.28
RNU6-338P-201ENST00000383888 Q6ZQY7 126 aa0.83□□□□□ -2.28
RNU6-338P-201ENST00000383888 SMIM4Q8WVI0 70 aa0.83□□□□□ -2.28
RNU6-338P-201ENST00000383888 LINC01558Q9Y6Z2 57 aa0.83□□□□□ -2.28
RNU6-338P-201ENST00000383888 IQSEC2Q5JU85 1478 aa0.83□□□□□ -2.28
RNU6-338P-201ENST00000383888 MYO16Q9Y6X6 1858 aa0.83□□□□□ -2.28
RNU6-338P-201ENST00000383888 TNS1Q9HBL0 1735 aaKnown RBP0.83□□□□□ -2.28
RNU6-338P-201ENST00000383888 ARHGEF12Q9NZN5 1544 aa0.83□□□□□ -2.28
RNU6-338P-201ENST00000383888 CCDC88CQ9P219 2028 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 WNK3Q9BYP7 1800 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 KDM6BO15054 1643 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 ARHGAP32A7KAX9 2087 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 CCDC88BA6NC98 1476 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 MED13Q9UHV7 2174 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 A0A087WVE0 104 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 TRAV1-2A0A0B4J238 106 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 NBDYA0A0U1RRE5 68 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 C10orf142B7Z368 130 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 ACYP2P14621 99 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 CCL18P55774 89 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 Q6ZRN7 208 aaPredicted RBP0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 SMIM5Q71RC9 77 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 DEFB107AQ8IZN7 70 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 ZNF625Q96I27 306 aaPredicted RBP0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 OBSCN-AS1Q96MR7 158 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 CCL19Q99731 98 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 WFDC6Q9BQY6 131 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 HILPDAQ9Y5L2 63 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 DISP1Q96F81 1524 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 DUOX2Q9NRD8 1548 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 UNC13BO14795 1591 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 LAMC3Q9Y6N6 1575 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 NINQ8N4C6 2090 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 PLXNA2O75051 1894 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 DOCK1Q14185 1865 aa0.82□□□□□ -2.28
RNU6-338P-201ENST00000383888 HEATR1Q9H583 2144 aaKnown RBP0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms