RNA–Protein interactions for RNA: ENST00000380799.1

SNAPC3-201, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 3 BASIC

Gene SNAPC3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-201ENST00000380799 IFT172Q9UG01 1749 aa0.83□□□□□ -2.28
SNAPC3-201ENST00000380799 NRKQ7Z2Y5 1582 aa0.83□□□□□ -2.28
SNAPC3-201ENST00000380799 ZDBF2Q9HCK1 2354 aa0.82□□□□□ -2.28
SNAPC3-201ENST00000380799 UBE2L5PA0A1B0GUS4 154 aa0.82□□□□□ -2.28
SNAPC3-201ENST00000380799 FAM24AA6NFZ4 105 aa0.82□□□□□ -2.28
SNAPC3-201ENST00000380799 S100PP25815 95 aa0.82□□□□□ -2.28
SNAPC3-201ENST00000380799 UBE2L3P68036 154 aaKnown RBP0.82□□□□□ -2.28
SNAPC3-201ENST00000380799 SPAG11BQ08648 103 aa0.82□□□□□ -2.28
SNAPC3-201ENST00000380799 SPAG11AQ6PDA7 123 aa0.82□□□□□ -2.28
SNAPC3-201ENST00000380799 LINC00474Q9P2X8 69 aa0.82□□□□□ -2.28
SNAPC3-201ENST00000380799 SHROOM2Q13796 1616 aa0.82□□□□□ -2.28
SNAPC3-201ENST00000380799 FBN2P35556 2912 aa0.82□□□□□ -2.28
SNAPC3-201ENST00000380799 TRBV7-3A0A075B6L6 115 aa0.81□□□□□ -2.28
SNAPC3-201ENST00000380799 C20orf202A1L168 122 aa0.81□□□□□ -2.28
SNAPC3-201ENST00000380799 NMBP08949 121 aa0.81□□□□□ -2.28
SNAPC3-201ENST00000380799 Q5VV11 94 aa0.81□□□□□ -2.28
SNAPC3-201ENST00000380799 CGREF1Q99674 301 aa0.81□□□□□ -2.28
SNAPC3-201ENST00000380799 DPH3P1Q9H4G8 78 aa0.81□□□□□ -2.28
SNAPC3-201ENST00000380799 PLAC8Q9NZF1 115 aa0.81□□□□□ -2.28
SNAPC3-201ENST00000380799 V9GYH0 126 aa0.81□□□□□ -2.28
SNAPC3-201ENST00000380799 TENM3Q9P273 2699 aa0.81□□□□□ -2.28
SNAPC3-201ENST00000380799 G3V318 75 aa0.8□□□□□ -2.28
SNAPC3-201ENST00000380799 M0R135 149 aa0.8□□□□□ -2.28
SNAPC3-201ENST00000380799 IFITM1P13164 125 aa0.8□□□□□ -2.28
SNAPC3-201ENST00000380799 GTF2H5Q6ZYL4 71 aa0.8□□□□□ -2.28
SNAPC3-201ENST00000380799 MYOZ3Q8TDC0 251 aa0.8□□□□□ -2.28
SNAPC3-201ENST00000380799 MGST2Q99735 147 aa0.8□□□□□ -2.28
SNAPC3-201ENST00000380799 NDUFA4L2Q9NRX3 87 aa0.8□□□□□ -2.28
SNAPC3-201ENST00000380799 DOCK2Q92608 1830 aa0.8□□□□□ -2.28
SNAPC3-201ENST00000380799 ABCA1O95477 2261 aa0.79□□□□□ -2.28
SNAPC3-201ENST00000380799 ATP5EP56381 51 aaPredicted RBP0.79□□□□□ -2.28
SNAPC3-201ENST00000380799 CFAP126Q5VTH2 177 aa0.79□□□□□ -2.28
SNAPC3-201ENST00000380799 PROK2Q9HC23 129 aa0.79□□□□□ -2.28
SNAPC3-201ENST00000380799 DYNLRB1Q9NP97 96 aa0.79□□□□□ -2.28
SNAPC3-201ENST00000380799 MYH8P13535 1937 aa0.79□□□□□ -2.28
SNAPC3-201ENST00000380799 C10orf71Q711Q0 1435 aa0.79□□□□□ -2.28
SNAPC3-201ENST00000380799 MAPKBP1O60336 1514 aa0.79□□□□□ -2.28
SNAPC3-201ENST00000380799 KIAA0100Q14667 2235 aaKnown RBP0.79□□□□□ -2.28
SNAPC3-201ENST00000380799 CTXND1A0A1B0GTU2 59 aa0.78□□□□□ -2.28
SNAPC3-201ENST00000380799 MED13LQ71F56 2210 aa0.77□□□□□ -2.29
SNAPC3-201ENST00000380799 DCDP81605 110 aaKnown RBP0.77□□□□□ -2.29
SNAPC3-201ENST00000380799 C14orf144Q96I85 54 aa0.77□□□□□ -2.29
SNAPC3-201ENST00000380799 C12orf57Q99622 126 aa0.77□□□□□ -2.29
SNAPC3-201ENST00000380799 TCEAL7Q9BRU2 100 aa0.77□□□□□ -2.29
SNAPC3-201ENST00000380799 KCPQ6ZWJ8 1503 aa0.77□□□□□ -2.29
SNAPC3-201ENST00000380799 SCAPERQ9BY12 1400 aa0.76□□□□□ -2.29
SNAPC3-201ENST00000380799 SPINK8P0C7L1 97 aa0.76□□□□□ -2.29
SNAPC3-201ENST00000380799 HSD52Q0P140 79 aa0.76□□□□□ -2.29
SNAPC3-201ENST00000380799 NPVFQ9HCQ7 196 aa0.76□□□□□ -2.29
SNAPC3-201ENST00000380799 UNC13BO14795 1591 aa0.75□□□□□ -2.29
SNAPC3-201ENST00000380799 KNTC1P50748 2209 aa0.75□□□□□ -2.29
SNAPC3-201ENST00000380799 GNG11P61952 73 aa0.75□□□□□ -2.29
SNAPC3-201ENST00000380799 AMELXQ99217 191 aa0.75□□□□□ -2.29
SNAPC3-201ENST00000380799 F5P12259 2224 aa0.74□□□□□ -2.29
SNAPC3-201ENST00000380799 ATP6V1G2-DDX39BF2Z307 99 aa0.74□□□□□ -2.29
SNAPC3-201ENST00000380799 HMGN4O00479 90 aa0.74□□□□□ -2.29
SNAPC3-201ENST00000380799 PRH1P02810 166 aa0.74□□□□□ -2.29
SNAPC3-201ENST00000380799 UBE2DNLQ8IWF7 75 aa0.74□□□□□ -2.29
SNAPC3-201ENST00000380799 SMIM4Q8WVI0 70 aa0.74□□□□□ -2.29
SNAPC3-201ENST00000380799 SPHKAPQ2M3C7 1700 aa0.74□□□□□ -2.29
SNAPC3-201ENST00000380799 NOTCH1P46531 2555 aa0.74□□□□□ -2.29
SNAPC3-201ENST00000380799 ZNF462Q96JM2 2506 aa0.74□□□□□ -2.29
SNAPC3-201ENST00000380799 MEGF8Q7Z7M0 2845 aa0.74□□□□□ -2.29
SNAPC3-201ENST00000380799 F8VRH5 84 aa0.73□□□□□ -2.29
SNAPC3-201ENST00000380799 PIN1P1O15428 100 aa0.73□□□□□ -2.29
SNAPC3-201ENST00000380799 FAM213BQ8TBF2 198 aa0.73□□□□□ -2.29
SNAPC3-201ENST00000380799 CC2D2AQ9P2K1 1620 aa0.73□□□□□ -2.29
SNAPC3-201ENST00000380799 ARHGAP5Q13017 1502 aa0.73□□□□□ -2.29
SNAPC3-201ENST00000380799 ZFYVE16Q7Z3T8 1539 aa0.73□□□□□ -2.29
SNAPC3-201ENST00000380799 ZNF609O15014 1411 aa0.72□□□□□ -2.29
SNAPC3-201ENST00000380799 LOC285095A0A1B0GVY8 99 aa0.72□□□□□ -2.29
SNAPC3-201ENST00000380799 IGLC7A0M8Q6 106 aa0.72□□□□□ -2.29
SNAPC3-201ENST00000380799 CHKB-CPT1BH3BT56 60 aa0.72□□□□□ -2.29
SNAPC3-201ENST00000380799 COX6A2Q02221 97 aa0.72□□□□□ -2.29
SNAPC3-201ENST00000380799 SSBP3-AS1Q7Z2R9 100 aa0.72□□□□□ -2.29
SNAPC3-201ENST00000380799 BAGE2Q86Y30 109 aa0.72□□□□□ -2.29
SNAPC3-201ENST00000380799 ZNF236Q9UL36 1845 aa0.72□□□□□ -2.29
SNAPC3-201ENST00000380799 TET3O43151 1660 aa0.72□□□□□ -2.29
SNAPC3-201ENST00000380799 PSME4Q14997 1843 aa0.71□□□□□ -2.3
SNAPC3-201ENST00000380799 UQCR11O14957 56 aa0.71□□□□□ -2.3
SNAPC3-201ENST00000380799 KRTAP2-3P0C7H8 128 aa0.71□□□□□ -2.3
SNAPC3-201ENST00000380799 SNCAP37840 140 aa0.71□□□□□ -2.3
SNAPC3-201ENST00000380799 KRTAP2-4Q9BYR9 128 aa0.71□□□□□ -2.3
SNAPC3-201ENST00000380799 KRTAP2-1Q9BYU5 128 aa0.71□□□□□ -2.3
SNAPC3-201ENST00000380799 UQCR10Q9UDW1 63 aa0.71□□□□□ -2.3
SNAPC3-201ENST00000380799 ZNF469Q96JG9 3925 aaPredicted RBP0.71□□□□□ -2.3
SNAPC3-201ENST00000380799 KIF21AQ7Z4S6 1674 aa0.71□□□□□ -2.3
SNAPC3-201ENST00000380799 MYOM1P52179 1685 aa0.7□□□□□ -2.3
SNAPC3-201ENST00000380799 TMEM218A2RU14 115 aa0.7□□□□□ -2.3
SNAPC3-201ENST00000380799 ZNF815PA8K554 130 aa0.7□□□□□ -2.3
SNAPC3-201ENST00000380799 TMEM262E9PQX1 116 aa0.7□□□□□ -2.3
SNAPC3-201ENST00000380799 RBP2P50120 134 aa0.7□□□□□ -2.3
SNAPC3-201ENST00000380799 COX17Q14061 63 aa0.7□□□□□ -2.3
SNAPC3-201ENST00000380799 TMEM170BQ5T4T1 132 aa0.7□□□□□ -2.3
SNAPC3-201ENST00000380799 SMR3AQ99954 134 aa0.7□□□□□ -2.3
SNAPC3-201ENST00000380799 LINC01558Q9Y6Z2 57 aa0.7□□□□□ -2.3
SNAPC3-201ENST00000380799 NAP1L6A6NFF2 107 aa0.69□□□□□ -2.3
SNAPC3-201ENST00000380799 H3BQ15 152 aa0.69□□□□□ -2.3
SNAPC3-201ENST00000380799 APOC3P02656 99 aa0.69□□□□□ -2.3
SNAPC3-201ENST00000380799 Q0VG73 95 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms