RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 WT1P19544 449 aaPredicted RBP8.93□□□□□ -0.98
VPS13A-205ENST00000376636 DIAPH2-AS1Q14236 149 aa8.93□□□□□ -0.98
VPS13A-205ENST00000376636 C7orf33Q8WU49 177 aa8.93□□□□□ -0.98
VPS13A-205ENST00000376636 A0A0J9YXY3 114 aa8.93□□□□□ -0.98
VPS13A-205ENST00000376636 UBE2D2P62837 147 aa8.93□□□□□ -0.98
VPS13A-205ENST00000376636 C20orf203Q8NBC4 194 aa8.93□□□□□ -0.98
VPS13A-205ENST00000376636 SNURFQ9Y675 71 aa8.93□□□□□ -0.98
VPS13A-205ENST00000376636 K7EMT4 169 aa8.93□□□□□ -0.98
VPS13A-205ENST00000376636 TRBV27A0A0K0K1C4 114 aa8.93□□□□□ -0.98
VPS13A-205ENST00000376636 DEFB112Q30KQ8 113 aa8.93□□□□□ -0.98
VPS13A-205ENST00000376636 IGKV2-24A0A0C4DH68 120 aa8.93□□□□□ -0.98
VPS13A-205ENST00000376636 DEFB135Q30KP9 77 aa8.93□□□□□ -0.98
VPS13A-205ENST00000376636 REG3AQ06141 175 aa8.92□□□□□ -0.98
VPS13A-205ENST00000376636 K7EIM0 57 aa8.92□□□□□ -0.98
VPS13A-205ENST00000376636 DHRS4-AS1Q9P1J3 65 aa8.92□□□□□ -0.98
VPS13A-205ENST00000376636 PRYO14603 147 aa8.92□□□□□ -0.98
VPS13A-205ENST00000376636 C1orf158Q8N1D5 194 aa8.92□□□□□ -0.98
VPS13A-205ENST00000376636 SMAD5-AS1Q9Y6J3 95 aa8.92□□□□□ -0.98
VPS13A-205ENST00000376636 A0A0J9YWU9 116 aa8.92□□□□□ -0.98
VPS13A-205ENST00000376636 COX7CP15954 63 aa8.92□□□□□ -0.98
VPS13A-205ENST00000376636 LOXL1Q08397 574 aaPredicted RBP8.92□□□□□ -0.98
VPS13A-205ENST00000376636 AJUBAQ96IF1 538 aa8.92□□□□□ -0.98
VPS13A-205ENST00000376636 IGHV7-81A0A0B4J1V7 117 aa8.92□□□□□ -0.98
VPS13A-205ENST00000376636 CTSGP08311 255 aa8.92□□□□□ -0.98
VPS13A-205ENST00000376636 FAM19A1Q7Z5A9 133 aa8.92□□□□□ -0.98
VPS13A-205ENST00000376636 C3orf84H3BNL1 204 aa8.91□□□□□ -0.98
VPS13A-205ENST00000376636 LTBP1Q14766 1721 aa8.91□□□□□ -0.98
VPS13A-205ENST00000376636 LINC00269Q8N2A0 174 aa8.91□□□□□ -0.98
VPS13A-205ENST00000376636 MSRB1Q9NZV6 116 aa8.91□□□□□ -0.98
VPS13A-205ENST00000376636 TRBV30A0A0K0K1B3 111 aa8.91□□□□□ -0.98
VPS13A-205ENST00000376636 VPREB1P12018 145 aa8.91□□□□□ -0.98
VPS13A-205ENST00000376636 GPR179Q6PRD1 2367 aa8.91□□□□□ -0.98
VPS13A-205ENST00000376636 TMEM89A2RUT3 159 aa8.91□□□□□ -0.98
VPS13A-205ENST00000376636 UBE2D1P51668 147 aa8.91□□□□□ -0.98
VPS13A-205ENST00000376636 SCXQ7RTU7 201 aa8.91□□□□□ -0.98
VPS13A-205ENST00000376636 C5orf56Q8N8D9 126 aa8.91□□□□□ -0.98
VPS13A-205ENST00000376636 C2CD3Q4AC94 2353 aa8.91□□□□□ -0.98
VPS13A-205ENST00000376636 IGKV1D-37A0A075B6S9 117 aa8.9□□□□□ -0.98
VPS13A-205ENST00000376636 SMIM26A0A096LP01 95 aa8.9□□□□□ -0.98
VPS13A-205ENST00000376636 UBE2D4Q9Y2X8 147 aa8.9□□□□□ -0.98
VPS13A-205ENST00000376636 IGKV1-17P01599 117 aa8.9□□□□□ -0.98
VPS13A-205ENST00000376636 LRCOL1A6NCL2 159 aa8.9□□□□□ -0.99
VPS13A-205ENST00000376636 ESM1Q9NQ30 184 aa8.9□□□□□ -0.99
VPS13A-205ENST00000376636 TMEM223A0PJW6 202 aa8.89□□□□□ -0.99
VPS13A-205ENST00000376636 CRYGDP07320 174 aa8.89□□□□□ -0.99
VPS13A-205ENST00000376636 IGHV4-30-2A0A087WSY4 118 aa8.88□□□□□ -0.99
VPS13A-205ENST00000376636 PRR4Q16378 134 aa8.88□□□□□ -0.99
VPS13A-205ENST00000376636 SPRY2O43597 315 aa8.88□□□□□ -0.99
VPS13A-205ENST00000376636 NUPR1O60356 82 aa8.88□□□□□ -0.99
VPS13A-205ENST00000376636 ODF3Q96PU9 254 aa8.88□□□□□ -0.99
VPS13A-205ENST00000376636 C11orf45Q8TAV5 145 aa8.88□□□□□ -0.99
VPS13A-205ENST00000376636 TRIAP1O43715 76 aa8.88□□□□□ -0.99
VPS13A-205ENST00000376636 UBE2D3P61077 147 aa8.88□□□□□ -0.99
VPS13A-205ENST00000376636 WFDC10AQ9H1F0 79 aa8.88□□□□□ -0.99
VPS13A-205ENST00000376636 MIFP14174 115 aa8.88□□□□□ -0.99
VPS13A-205ENST00000376636 PRSS33Q8NF86 280 aa8.88□□□□□ -0.99
VPS13A-205ENST00000376636 TTTY13Q9BZ97 58 aa8.87□□□□□ -0.99
VPS13A-205ENST00000376636 ZFAND3Q9H8U3 227 aa8.87□□□□□ -0.99
VPS13A-205ENST00000376636 Q6ZVQ6 151 aa8.87□□□□□ -0.99
VPS13A-205ENST00000376636 FAM167A-AS1Q96KT0 104 aa8.87□□□□□ -0.99
VPS13A-205ENST00000376636 COX17Q14061 63 aa8.87□□□□□ -0.99
VPS13A-205ENST00000376636 Q8NFD4 153 aa8.87□□□□□ -0.99
VPS13A-205ENST00000376636 LINC00308Q8TCZ7 52 aa8.87□□□□□ -0.99
VPS13A-205ENST00000376636 CHCHD10Q8WYQ3 142 aaPredicted RBP8.86□□□□□ -0.99
VPS13A-205ENST00000376636 SMIM9A6NGZ8 99 aa8.86□□□□□ -0.99
VPS13A-205ENST00000376636 IGLV3-1P01715 115 aa8.86□□□□□ -0.99
VPS13A-205ENST00000376636 MUC6Q6W4X9 2439 aa8.86□□□□□ -0.99
VPS13A-205ENST00000376636 A0A096LNI7 61 aa8.86□□□□□ -0.99
VPS13A-205ENST00000376636 CPAMD8Q8IZJ3 1885 aa8.86□□□□□ -0.99
VPS13A-205ENST00000376636 NEXN-AS1Q8NBZ9 246 aa8.85□□□□□ -0.99
VPS13A-205ENST00000376636 DEFB113Q30KQ7 82 aa8.85□□□□□ -0.99
VPS13A-205ENST00000376636 MYO9AB2RTY4 2548 aa8.85□□□□□ -0.99
VPS13A-205ENST00000376636 ADAMTS20P59510 1910 aa8.85□□□□□ -0.99
VPS13A-205ENST00000376636 RNF185Q96GF1 192 aa8.85□□□□□ -0.99
VPS13A-205ENST00000376636 SIRPDQ9H106 197 aa8.84□□□□□ -0.99
VPS13A-205ENST00000376636 MYCNOSP40205 109 aa8.84□□□□□ -0.99
VPS13A-205ENST00000376636 A0A0J9YX75 114 aa8.84□□□□□ -0.99
VPS13A-205ENST00000376636 NRACQ8N912 160 aa8.84□□□□□ -0.99
VPS13A-205ENST00000376636 TRBV6-5A0A0K0K1A5 114 aa8.84□□□□□ -1
VPS13A-205ENST00000376636 COL4A5P29400 1685 aa8.83□□□□□ -1
VPS13A-205ENST00000376636 TRBV7-6A0A0J9YX20 115 aa8.83□□□□□ -1
VPS13A-205ENST00000376636 BDP1A6H8Y1 2624 aa8.83□□□□□ -1
VPS13A-205ENST00000376636 COL5A1P20908 1838 aaPredicted RBP8.83□□□□□ -1
VPS13A-205ENST00000376636 LINC00474Q9P2X8 69 aa8.83□□□□□ -1
VPS13A-205ENST00000376636 COL4A1P02462 1669 aa8.82□□□□□ -1
VPS13A-205ENST00000376636 WFDC13Q8IUB5 93 aa8.82□□□□□ -1
VPS13A-205ENST00000376636 C19orf71A6NCJ1 209 aa8.82□□□□□ -1
VPS13A-205ENST00000376636 IGHV4-38-2P0DP08 117 aa8.82□□□□□ -1
VPS13A-205ENST00000376636 FAM19A5Q7Z5A7 132 aaPredicted RBP8.82□□□□□ -1
VPS13A-205ENST00000376636 ZNF503-AS2A6NEH8 195 aa8.82□□□□□ -1
VPS13A-205ENST00000376636 SLPIP03973 132 aa8.82□□□□□ -1
VPS13A-205ENST00000376636 CSDC2Q9Y534 153 aaKnown RBP8.82□□□□□ -1
VPS13A-205ENST00000376636 DEFB4AO15263 64 aa8.82□□□□□ -1
VPS13A-205ENST00000376636 IGHV4-30-4P0DP06 118 aa8.82□□□□□ -1
VPS13A-205ENST00000376636 IGHV4-31P0DP07 118 aa8.82□□□□□ -1
VPS13A-205ENST00000376636 MUC7Q8TAX7 377 aa8.82□□□□□ -1
VPS13A-205ENST00000376636 LINC00467Q9BRT7 94 aa8.82□□□□□ -1
VPS13A-205ENST00000376636 SPINK6Q6UWN8 80 aa8.82□□□□□ -1
VPS13A-205ENST00000376636 LINC00694P0DN24 101 aa8.82□□□□□ -1
VPS13A-205ENST00000376636 HILS1P60008 231 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms