RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 FAM231AP0DMU4 169 aa10.25□□□□□ -0.77
C9orf47-203ENST00000375851 FAM231CP0DMU5 169 aa10.25□□□□□ -0.77
C9orf47-203ENST00000375851 CCL18P55774 89 aa10.25□□□□□ -0.77
C9orf47-203ENST00000375851 Q6ZTI0 123 aa10.25□□□□□ -0.77
C9orf47-203ENST00000375851 GAGE12HA6NDE8 117 aa10.24□□□□□ -0.77
C9orf47-203ENST00000375851 MTORP42345 2549 aa10.24□□□□□ -0.77
C9orf47-203ENST00000375851 BAALC-AS2P0C853 105 aa10.24□□□□□ -0.77
C9orf47-203ENST00000375851 YPEL4Q96NS1 127 aa10.23□□□□□ -0.77
C9orf47-203ENST00000375851 IGLV2-11P01706 119 aa10.23□□□□□ -0.77
C9orf47-203ENST00000375851 RPL32P62910 135 aaKnown RBP10.23□□□□□ -0.77
C9orf47-203ENST00000375851 DSCR8Q96T75 97 aa10.23□□□□□ -0.77
C9orf47-203ENST00000375851 PSMB8P28062 276 aa10.22□□□□□ -0.77
C9orf47-203ENST00000375851 KLK12Q9UKR0 248 aa10.22□□□□□ -0.77
C9orf47-203ENST00000375851 TAX1BP3O14907 124 aa10.22□□□□□ -0.77
C9orf47-203ENST00000375851 IGHV1-58A0A0C4DH39 117 aa10.22□□□□□ -0.77
C9orf47-203ENST00000375851 Q6ZUT4 128 aa10.22□□□□□ -0.77
C9orf47-203ENST00000375851 NDUFA11Q86Y39 141 aa10.21□□□□□ -0.77
C9orf47-203ENST00000375851 Q6ZS46 218 aa10.21□□□□□ -0.78
C9orf47-203ENST00000375851 ATG2AQ2TAZ0 1938 aa10.2□□□□□ -0.78
C9orf47-203ENST00000375851 INAFM1C9JVW0 142 aa10.2□□□□□ -0.78
C9orf47-203ENST00000375851 ANKRD29Q8N6D5 301 aa10.2□□□□□ -0.78
C9orf47-203ENST00000375851 UBE2BP63146 152 aa10.2□□□□□ -0.78
C9orf47-203ENST00000375851 PSMG3-AS1Q96PY0 264 aa10.2□□□□□ -0.78
C9orf47-203ENST00000375851 ORMDL1Q9P0S3 153 aa10.2□□□□□ -0.78
C9orf47-203ENST00000375851 H0YGX0 51 aa10.19□□□□□ -0.78
C9orf47-203ENST00000375851 ZNF702PQ9H963 129 aa10.18□□□□□ -0.78
C9orf47-203ENST00000375851 RPL18AQ02543 176 aaKnown RBP10.18□□□□□ -0.78
C9orf47-203ENST00000375851 HIST2H2BDQ6DRA6 164 aa10.18□□□□□ -0.78
C9orf47-203ENST00000375851 F8W735 103 aaPredicted RBP10.18□□□□□ -0.78
C9orf47-203ENST00000375851 SPAG11BQ08648 103 aa10.18□□□□□ -0.78
C9orf47-203ENST00000375851 LINC01620Q4KN68 170 aa10.18□□□□□ -0.78
C9orf47-203ENST00000375851 IGHV4-4A0A075B6R2 117 aa10.18□□□□□ -0.78
C9orf47-203ENST00000375851 MIR7-3HGQ8N6C7 128 aa10.18□□□□□ -0.78
C9orf47-203ENST00000375851 C15orf53Q8NAA6 179 aa10.18□□□□□ -0.78
C9orf47-203ENST00000375851 NDUFA1O15239 70 aa10.17□□□□□ -0.78
C9orf47-203ENST00000375851 AVPP01185 164 aa10.17□□□□□ -0.78
C9orf47-203ENST00000375851 WFDC2Q14508 124 aa10.17□□□□□ -0.78
C9orf47-203ENST00000375851 FAM222AQ5U5X8 452 aa10.17□□□□□ -0.78
C9orf47-203ENST00000375851 RNF185Q96GF1 192 aa10.17□□□□□ -0.78
C9orf47-203ENST00000375851 A0A1W2PPR1 153 aa10.16□□□□□ -0.78
C9orf47-203ENST00000375851 IGLV1-40P01703 118 aa10.16□□□□□ -0.78
C9orf47-203ENST00000375851 CRYBA4P53673 196 aa10.16□□□□□ -0.78
C9orf47-203ENST00000375851 DEFB105AQ8NG35 78 aa10.16□□□□□ -0.78
C9orf47-203ENST00000375851 M0QY20 66 aa10.16□□□□□ -0.78
C9orf47-203ENST00000375851 C9orf153Q5TBE3 101 aa10.16□□□□□ -0.78
C9orf47-203ENST00000375851 C11orf21Q9P2W6 132 aa10.16□□□□□ -0.78
C9orf47-203ENST00000375851 ETDCA0A1B0GVM5 59 aa10.15□□□□□ -0.78
C9orf47-203ENST00000375851 CXCL5P42830 114 aa10.15□□□□□ -0.78
C9orf47-203ENST00000375851 RBMY1FQ15415 496 aaKnown RBP10.15□□□□□ -0.78
C9orf47-203ENST00000375851 NEXN-AS1Q8NBZ9 246 aa10.15□□□□□ -0.78
C9orf47-203ENST00000375851 LINC01006Q8NI28 216 aa10.15□□□□□ -0.78
C9orf47-203ENST00000375851 TRAV26-1A0A087WT03 109 aa10.15□□□□□ -0.78
C9orf47-203ENST00000375851 POLQO75417 2590 aa10.15□□□□□ -0.78
C9orf47-203ENST00000375851 RS1O15537 224 aa10.15□□□□□ -0.79
C9orf47-203ENST00000375851 TEN1Q86WV5 123 aa10.15□□□□□ -0.79
C9orf47-203ENST00000375851 LINC00467Q9BRT7 94 aa10.15□□□□□ -0.79
C9orf47-203ENST00000375851 PRR9Q5T870 116 aa10.14□□□□□ -0.79
C9orf47-203ENST00000375851 CDKN2A-AS1Q9UH64 79 aa10.14□□□□□ -0.79
C9orf47-203ENST00000375851 SMIM9A6NGZ8 99 aa10.13□□□□□ -0.79
C9orf47-203ENST00000375851 U3KQK5 164 aa10.13□□□□□ -0.79
C9orf47-203ENST00000375851 RNASE3P12724 160 aaKnown RBP10.13□□□□□ -0.79
C9orf47-203ENST00000375851 CEP350Q5VT06 3117 aa10.13□□□□□ -0.79
C9orf47-203ENST00000375851 CFAP126Q5VTH2 177 aa10.13□□□□□ -0.79
C9orf47-203ENST00000375851 DNAH12Q6ZR08 3092 aa10.13□□□□□ -0.79
C9orf47-203ENST00000375851 C18orf65Q6ZTR6 163 aa10.13□□□□□ -0.79
C9orf47-203ENST00000375851 TP73-AS1Q9UF72 201 aa10.13□□□□□ -0.79
C9orf47-203ENST00000375851 IGLV4-3A0A075B6K6 122 aa10.12□□□□□ -0.79
C9orf47-203ENST00000375851 LINC00482Q8N8I6 264 aa10.12□□□□□ -0.79
C9orf47-203ENST00000375851 PROK1P58294 105 aa10.12□□□□□ -0.79
C9orf47-203ENST00000375851 COL5A1P20908 1838 aaPredicted RBP10.12□□□□□ -0.79
C9orf47-203ENST00000375851 NFE4Q86UQ8 179 aa10.12□□□□□ -0.79
C9orf47-203ENST00000375851 A0A0J9YXY3 114 aa10.12□□□□□ -0.79
C9orf47-203ENST00000375851 LYRM9A8MSI8 78 aa10.11□□□□□ -0.79
C9orf47-203ENST00000375851 KLLNB2CW77 178 aa10.11□□□□□ -0.79
C9orf47-203ENST00000375851 LECT2O14960 151 aa10.11□□□□□ -0.79
C9orf47-203ENST00000375851 EPG5Q9HCE0 2579 aa10.11□□□□□ -0.79
C9orf47-203ENST00000375851 PRRC2CQ9Y520 2896 aaKnown RBP10.11□□□□□ -0.79
C9orf47-203ENST00000375851 LY6G6DO95868 133 aa10.11□□□□□ -0.79
C9orf47-203ENST00000375851 ZNF22P17026 224 aaPredicted RBP10.11□□□□□ -0.79
C9orf47-203ENST00000375851 LINC00269Q8N2A0 174 aa10.11□□□□□ -0.79
C9orf47-203ENST00000375851 CLEC2BQ92478 149 aa10.11□□□□□ -0.79
C9orf47-203ENST00000375851 TNRC6BQ9UPQ9 1833 aaKnown RBP10.11□□□□□ -0.79
C9orf47-203ENST00000375851 IGKV2D-26A0A0A0MRZ7 120 aa10.1□□□□□ -0.79
C9orf47-203ENST00000375851 TRBV27A0A0K0K1C4 114 aa10.1□□□□□ -0.79
C9orf47-203ENST00000375851 KRTAP10-9P60411 292 aa10.1□□□□□ -0.79
C9orf47-203ENST00000375851 DCANP1Q8TF63 244 aa10.1□□□□□ -0.79
C9orf47-203ENST00000375851 NCR3O14931 201 aa10.1□□□□□ -0.79
C9orf47-203ENST00000375851 MIAQ16674 131 aa10.1□□□□□ -0.79
C9orf47-203ENST00000375851 C11orf45Q8TAV5 145 aa10.1□□□□□ -0.79
C9orf47-203ENST00000375851 EML5Q05BV3 1969 aa10.1□□□□□ -0.79
C9orf47-203ENST00000375851 RNASE8Q8TDE3 154 aaKnown RBP10.1□□□□□ -0.79
C9orf47-203ENST00000375851 SPANXDQ9BXN6 97 aa10.1□□□□□ -0.79
C9orf47-203ENST00000375851 ACYP1P07311 99 aa10.09□□□□□ -0.79
C9orf47-203ENST00000375851 TIRAPP58753 221 aa10.09□□□□□ -0.79
C9orf47-203ENST00000375851 NRACQ8N912 160 aa10.09□□□□□ -0.79
C9orf47-203ENST00000375851 TRBV6-5A0A0K0K1A5 114 aa10.09□□□□□ -0.79
C9orf47-203ENST00000375851 hADV29S1A0JD25 119 aa10.08□□□□□ -0.8
C9orf47-203ENST00000375851 REG3AQ06141 175 aa10.08□□□□□ -0.8
C9orf47-203ENST00000375851 TM2D2Q9BX73 214 aa10.08□□□□□ -0.8
C9orf47-203ENST00000375851 MRPS12O15235 138 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms