RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 Q1RN00 199 aa5.67□□□□□ -1.5
USP48-203ENST00000374732 KNTC1P50748 2209 aa5.67□□□□□ -1.5
USP48-203ENST00000374732 CACNA1GO43497 2377 aa5.67□□□□□ -1.5
USP48-203ENST00000374732 CNTRLQ7Z7A1 2325 aa5.67□□□□□ -1.5
USP48-203ENST00000374732 SRRM5B3KS81 715 aa5.66□□□□□ -1.5
USP48-203ENST00000374732 RETNLBQ9BQ08 111 aa5.66□□□□□ -1.5
USP48-203ENST00000374732 TIMM9Q9Y5J7 89 aa5.66□□□□□ -1.5
USP48-203ENST00000374732 IGLV9-49A0A0B4J1Y8 123 aa5.66□□□□□ -1.5
USP48-203ENST00000374732 LRCOL1A6NCL2 159 aa5.66□□□□□ -1.5
USP48-203ENST00000374732 LHBP01229 141 aa5.66□□□□□ -1.5
USP48-203ENST00000374732 DEFA4P12838 97 aa5.66□□□□□ -1.5
USP48-203ENST00000374732 MIFP14174 115 aa5.66□□□□□ -1.5
USP48-203ENST00000374732 ADM2Q7Z4H4 148 aa5.66□□□□□ -1.5
USP48-203ENST00000374732 GPR179Q6PRD1 2367 aa5.66□□□□□ -1.5
USP48-203ENST00000374732 ZNF826PQ6ZT77 177 aa5.66□□□□□ -1.5
USP48-203ENST00000374732 ZNF355PQ9NSJ1 428 aa5.66□□□□□ -1.5
USP48-203ENST00000374732 FAM215AQ9Y5M1 114 aa5.66□□□□□ -1.5
USP48-203ENST00000374732 ZFHX2Q9C0A1 2572 aaPredicted RBP5.65□□□□□ -1.5
USP48-203ENST00000374732 TRAV7A0A075B6U4 112 aa5.65□□□□□ -1.5
USP48-203ENST00000374732 HIGD1CA8MV81 97 aa5.65□□□□□ -1.5
USP48-203ENST00000374732 ZNF137PP52743 207 aa5.65□□□□□ -1.5
USP48-203ENST00000374732 FXYD7P58549 80 aa5.64□□□□□ -1.51
USP48-203ENST00000374732 VMO1Q7Z5L0 202 aa5.64□□□□□ -1.51
USP48-203ENST00000374732 FREM2Q5SZK8 3169 aa5.64□□□□□ -1.51
USP48-203ENST00000374732 SDHAF1A6NFY7 115 aa5.64□□□□□ -1.51
USP48-203ENST00000374732 IGHV3-33P01772 117 aa5.64□□□□□ -1.51
USP48-203ENST00000374732 PRSS1P07477 247 aa5.64□□□□□ -1.51
USP48-203ENST00000374732 CGB3P0DN86 165 aa5.64□□□□□ -1.51
USP48-203ENST00000374732 CGB7P0DN87 165 aa5.64□□□□□ -1.51
USP48-203ENST00000374732 DYNLRB2Q8TF09 96 aa5.64□□□□□ -1.51
USP48-203ENST00000374732 MUC3AQ02505 3323 aa5.64□□□□□ -1.51
USP48-203ENST00000374732 K7EQG2 157 aa5.64□□□□□ -1.51
USP48-203ENST00000374732 GNRH2O43555 120 aa5.64□□□□□ -1.51
USP48-203ENST00000374732 LINC00574Q9H8X3 128 aa5.64□□□□□ -1.51
USP48-203ENST00000374732 FAM208BQ5VWN6 2430 aa5.63□□□□□ -1.51
USP48-203ENST00000374732 CHKB-CPT1BH3BT56 60 aa5.63□□□□□ -1.51
USP48-203ENST00000374732 ADAMTSL4-AS1Q5T5F5 129 aa5.63□□□□□ -1.51
USP48-203ENST00000374732 C22orf34Q6ZV56 151 aa5.63□□□□□ -1.51
USP48-203ENST00000374732 IGKV3D-20A0A0C4DH25 116 aa5.63□□□□□ -1.51
USP48-203ENST00000374732 PMS2P5A8MQ11 134 aa5.63□□□□□ -1.51
USP48-203ENST00000374732 C17orf98A8MV24 154 aa5.63□□□□□ -1.51
USP48-203ENST00000374732 EDDM3BP56851 147 aa5.63□□□□□ -1.51
USP48-203ENST00000374732 IAPPP10997 89 aa5.62□□□□□ -1.51
USP48-203ENST00000374732 WDFY4Q6ZS81 3184 aa5.62□□□□□ -1.51
USP48-203ENST00000374732 TRAV40A0A0B4J280 105 aa5.62□□□□□ -1.51
USP48-203ENST00000374732 ZNF815PA8K554 130 aa5.62□□□□□ -1.51
USP48-203ENST00000374732 RPL28P46779 137 aaKnown RBP5.62□□□□□ -1.51
USP48-203ENST00000374732 SPANXN5Q5MJ07 72 aa5.62□□□□□ -1.51
USP48-203ENST00000374732 FAM53AQ6NSI3 398 aaPredicted RBP5.62□□□□□ -1.51
USP48-203ENST00000374732 UBALD1Q8TB05 177 aa5.62□□□□□ -1.51
USP48-203ENST00000374732 IGHV3-64DA0A0J9YX35 117 aa5.61□□□□□ -1.51
USP48-203ENST00000374732 C3orf84H3BNL1 204 aa5.61□□□□□ -1.51
USP48-203ENST00000374732 ODF3L2Q3SX64 289 aa5.61□□□□□ -1.51
USP48-203ENST00000374732 PROP1O75360 226 aa5.61□□□□□ -1.51
USP48-203ENST00000374732 MIR17HGQ75NE6 70 aa5.61□□□□□ -1.51
USP48-203ENST00000374732 C17orf58Q2M2W7 97 aa5.6□□□□□ -1.51
USP48-203ENST00000374732 C19orf84I3L1E1 186 aa5.6□□□□□ -1.51
USP48-203ENST00000374732 IGHV1-46P01743 117 aa5.6□□□□□ -1.51
USP48-203ENST00000374732 Q5VV11 94 aa5.6□□□□□ -1.51
USP48-203ENST00000374732 TRBV30A0A0K0K1B3 111 aa5.59□□□□□ -1.51
USP48-203ENST00000374732 LY6HO94772 140 aa5.59□□□□□ -1.51
USP48-203ENST00000374732 ARL14EPLP0DKL9 152 aa5.59□□□□□ -1.51
USP48-203ENST00000374732 IGHV3OR16-10A0A075B7F0 116 aa5.59□□□□□ -1.51
USP48-203ENST00000374732 IGHV3-43A0A0B4J1X8 118 aa5.59□□□□□ -1.51
USP48-203ENST00000374732 IGHV3-43DP0DP04 118 aa5.59□□□□□ -1.51
USP48-203ENST00000374732 GAFA1Q96PS6 74 aa5.59□□□□□ -1.51
USP48-203ENST00000374732 DEFB108AA8MXU0 73 aa5.58□□□□□ -1.52
USP48-203ENST00000374732 COX6CP09669 75 aa5.58□□□□□ -1.52
USP48-203ENST00000374732 LINC00242Q5T6M2 205 aa5.58□□□□□ -1.52
USP48-203ENST00000374732 hDV103S1A0JD37 113 aa5.58□□□□□ -1.52
USP48-203ENST00000374732 CEP250Q9BV73 2442 aa5.58□□□□□ -1.52
USP48-203ENST00000374732 KRTAP16-1A8MUX0 517 aa5.57□□□□□ -1.52
USP48-203ENST00000374732 C9orf116Q5BN46 136 aaPredicted RBP5.57□□□□□ -1.52
USP48-203ENST00000374732 TMEM14BQ9NUH8 114 aa5.57□□□□□ -1.52
USP48-203ENST00000374732 ATP6V0E1O15342 81 aa5.57□□□□□ -1.52
USP48-203ENST00000374732 BCE1O60756 84 aa5.57□□□□□ -1.52
USP48-203ENST00000374732 Q8N7P7 452 aa5.57□□□□□ -1.52
USP48-203ENST00000374732 TMEM263Q8WUH6 116 aaKnown RBP5.57□□□□□ -1.52
USP48-203ENST00000374732 SAA2P0DJI9 122 aaPredicted RBP5.56□□□□□ -1.52
USP48-203ENST00000374732 CMC4P56277 68 aaPredicted RBP5.56□□□□□ -1.52
USP48-203ENST00000374732 RPL39P5Q59GN2 51 aa5.56□□□□□ -1.52
USP48-203ENST00000374732 C20orf203Q8NBC4 194 aa5.56□□□□□ -1.52
USP48-203ENST00000374732 CACNA1BQ00975 2339 aa5.56□□□□□ -1.52
USP48-203ENST00000374732 NDUFA3O95167 84 aa5.56□□□□□ -1.52
USP48-203ENST00000374732 LINC00476Q8WZB0 136 aa5.56□□□□□ -1.52
USP48-203ENST00000374732 ZFHX3Q15911 3703 aa5.56□□□□□ -1.52
USP48-203ENST00000374732 DNAL4O96015 105 aa5.56□□□□□ -1.52
USP48-203ENST00000374732 IGHV3-30P01768 117 aa5.56□□□□□ -1.52
USP48-203ENST00000374732 IGHV3-30-5P0DP03 117 aa5.56□□□□□ -1.52
USP48-203ENST00000374732 ZNF833PQ6ZTB9 187 aa5.56□□□□□ -1.52
USP48-203ENST00000374732 TFF3Q07654 80 aa5.55□□□□□ -1.52
USP48-203ENST00000374732 SPANXN1Q5VSR9 72 aa5.55□□□□□ -1.52
USP48-203ENST00000374732 C1orf229Q6ZS94 237 aaPredicted RBP5.55□□□□□ -1.52
USP48-203ENST00000374732 Q6ZTC4 211 aa5.55□□□□□ -1.52
USP48-203ENST00000374732 SCGB3A1Q96QR1 104 aa5.55□□□□□ -1.52
USP48-203ENST00000374732 KAAG1Q9UBP8 84 aa5.55□□□□□ -1.52
USP48-203ENST00000374732 MOBPQ13875 183 aa5.55□□□□□ -1.52
USP48-203ENST00000374732 C1orf134Q5TEV5 83 aa5.55□□□□□ -1.52
USP48-203ENST00000374732 MAP1BP46821 2468 aaKnown RBP5.54□□□□□ -1.52
USP48-203ENST00000374732 PRB1P04280 392 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms