RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 DPH3Q96FX2 82 aa9.58□□□□□ -0.88
PRPF4-201ENST00000374198 CYSTM1Q9H1C7 97 aa9.58□□□□□ -0.88
PRPF4-201ENST00000374198 PCNX1Q96RV3 2341 aa9.58□□□□□ -0.88
PRPF4-201ENST00000374198 USP9YO00507 2555 aaPredicted RBP9.58□□□□□ -0.88
PRPF4-201ENST00000374198 CCDC140Q96MF4 163 aa9.58□□□□□ -0.88
PRPF4-201ENST00000374198 NDUFA12Q9UI09 145 aa9.58□□□□□ -0.88
PRPF4-201ENST00000374198 ARHGAP32A7KAX9 2087 aa9.57□□□□□ -0.88
PRPF4-201ENST00000374198 DOPEY1Q5JWR5 2465 aa9.57□□□□□ -0.88
PRPF4-201ENST00000374198 IGLV4-3A0A075B6K6 122 aa9.57□□□□□ -0.88
PRPF4-201ENST00000374198 TRBV7-1A0A0A6YYK4 115 aa9.57□□□□□ -0.88
PRPF4-201ENST00000374198 LYNX1G3V0Z9 82 aa9.57□□□□□ -0.88
PRPF4-201ENST00000374198 LYNX1P0DP58 116 aa9.57□□□□□ -0.88
PRPF4-201ENST00000374198 HIST2H2BCQ6DN03 193 aa9.57□□□□□ -0.88
PRPF4-201ENST00000374198 DEFB1P60022 68 aa9.56□□□□□ -0.88
PRPF4-201ENST00000374198 TMEM258P61165 79 aa9.56□□□□□ -0.88
PRPF4-201ENST00000374198 Q8N6K4 173 aa9.56□□□□□ -0.88
PRPF4-201ENST00000374198 C20orf203Q8NBC4 194 aa9.56□□□□□ -0.88
PRPF4-201ENST00000374198 KIR2DL5BQ8NHK3 375 aa9.56□□□□□ -0.88
PRPF4-201ENST00000374198 FAM110DQ8TAY7 271 aaPredicted RBP9.56□□□□□ -0.88
PRPF4-201ENST00000374198 FAM19A4Q96LR4 140 aa9.56□□□□□ -0.88
PRPF4-201ENST00000374198 MUC4Q99102 2169 aa9.56□□□□□ -0.88
PRPF4-201ENST00000374198 WNK2Q9Y3S1 2297 aa9.56□□□□□ -0.88
PRPF4-201ENST00000374198 DAZ2Q13117 558 aaKnown RBP9.56□□□□□ -0.88
PRPF4-201ENST00000374198 DAZ4Q86SG3 579 aaKnown RBP9.56□□□□□ -0.88
PRPF4-201ENST00000374198 DAZ1Q9NQZ3 744 aaKnown RBP9.56□□□□□ -0.88
PRPF4-201ENST00000374198 DAZ3Q9NR90 486 aaKnown RBP9.56□□□□□ -0.88
PRPF4-201ENST00000374198 IGHV1-58A0A0C4DH39 117 aa9.55□□□□□ -0.88
PRPF4-201ENST00000374198 APRG1Q8IVJ8 170 aa9.55□□□□□ -0.88
PRPF4-201ENST00000374198 PKDREJQ9NTG1 2253 aa9.55□□□□□ -0.88
PRPF4-201ENST00000374198 LY6G5BQ8NDX9 201 aa9.55□□□□□ -0.88
PRPF4-201ENST00000374198 COL12A1Q99715 3063 aa9.55□□□□□ -0.88
PRPF4-201ENST00000374198 ECSCRQ19T08 205 aa9.54□□□□□ -0.88
PRPF4-201ENST00000374198 DAND5Q8N907 189 aa9.54□□□□□ -0.88
PRPF4-201ENST00000374198 CITED2Q99967 270 aaPredicted RBP9.54□□□□□ -0.88
PRPF4-201ENST00000374198 TRAV12-3A0A0B4J271 114 aa9.54□□□□□ -0.88
PRPF4-201ENST00000374198 ODF3BA8MYP8 253 aa9.54□□□□□ -0.88
PRPF4-201ENST00000374198 COX7A2LO14548 114 aa9.54□□□□□ -0.88
PRPF4-201ENST00000374198 ASH1LQ9NR48 2969 aaKnown RBP9.54□□□□□ -0.88
PRPF4-201ENST00000374198 F5H768 121 aa9.53□□□□□ -0.88
PRPF4-201ENST00000374198 RPL11P62913 178 aaKnown RBP9.53□□□□□ -0.88
PRPF4-201ENST00000374198 MRPS36P82909 103 aaKnown RBP9.53□□□□□ -0.88
PRPF4-201ENST00000374198 KLK9Q2XQG4 91 aa9.53□□□□□ -0.88
PRPF4-201ENST00000374198 FAM74A4Q5TZK3 123 aa9.53□□□□□ -0.88
PRPF4-201ENST00000374198 KLK9Q9UKQ9 250 aa9.53□□□□□ -0.88
PRPF4-201ENST00000374198 CSMD1Q96PZ7 3565 aa9.53□□□□□ -0.88
PRPF4-201ENST00000374198 M0QY20 66 aa9.53□□□□□ -0.88
PRPF4-201ENST00000374198 OXTP01178 125 aa9.53□□□□□ -0.88
PRPF4-201ENST00000374198 TIRAPP58753 221 aa9.53□□□□□ -0.88
PRPF4-201ENST00000374198 CDSNQ15517 529 aa9.53□□□□□ -0.88
PRPF4-201ENST00000374198 C4orf26Q17RF5 130 aa9.53□□□□□ -0.88
PRPF4-201ENST00000374198 E7EQL1 145 aa9.52□□□□□ -0.88
PRPF4-201ENST00000374198 VSIG2Q96IQ7 327 aa9.52□□□□□ -0.88
PRPF4-201ENST00000374198 M0R1W7 72 aa9.52□□□□□ -0.89
PRPF4-201ENST00000374198 BAALC-AS2P0C853 105 aa9.52□□□□□ -0.89
PRPF4-201ENST00000374198 RPL18AQ02543 176 aaKnown RBP9.52□□□□□ -0.89
PRPF4-201ENST00000374198 UTP20O75691 2785 aaKnown RBP9.52□□□□□ -0.89
PRPF4-201ENST00000374198 A8MZ25 164 aa9.52□□□□□ -0.89
PRPF4-201ENST00000374198 F6UB75 175 aa9.52□□□□□ -0.89
PRPF4-201ENST00000374198 TIMM17BO60830 172 aa9.52□□□□□ -0.89
PRPF4-201ENST00000374198 GRNP28799 593 aaKnown RBP9.52□□□□□ -0.89
PRPF4-201ENST00000374198 Q8N9W7 124 aa9.52□□□□□ -0.89
PRPF4-201ENST00000374198 PRRC2AP48634 2157 aaKnown RBP9.51□□□□□ -0.89
PRPF4-201ENST00000374198 SETXQ7Z333 2677 aaKnown RBP9.51□□□□□ -0.89
PRPF4-201ENST00000374198 SOCS3O14543 225 aa9.51□□□□□ -0.89
PRPF4-201ENST00000374198 BEAN1Q3B7T3 259 aa9.51□□□□□ -0.89
PRPF4-201ENST00000374198 DSCR8Q96T75 97 aa9.51□□□□□ -0.89
PRPF4-201ENST00000374198 UPK3BQ9BT76 320 aa9.51□□□□□ -0.89
PRPF4-201ENST00000374198 C22orf24Q9Y442 160 aa9.51□□□□□ -0.89
PRPF4-201ENST00000374198 ATP6V0E1O15342 81 aa9.5□□□□□ -0.89
PRPF4-201ENST00000374198 INAFM2P0DMQ5 153 aa9.5□□□□□ -0.89
PRPF4-201ENST00000374198 CD28P10747 220 aa9.5□□□□□ -0.89
PRPF4-201ENST00000374198 Q5XG85 94 aa9.5□□□□□ -0.89
PRPF4-201ENST00000374198 IGHV3OR16-10A0A075B7F0 116 aa9.5□□□□□ -0.89
PRPF4-201ENST00000374198 TRAV13-1A0A0B4J241 112 aa9.5□□□□□ -0.89
PRPF4-201ENST00000374198 HRCT1Q6UXD1 115 aa9.5□□□□□ -0.89
PRPF4-201ENST00000374198 SERP2Q8N6R1 65 aa9.5□□□□□ -0.89
PRPF4-201ENST00000374198 FAM104AQ969W3 186 aa9.5□□□□□ -0.89
PRPF4-201ENST00000374198 C19orf84I3L1E1 186 aa9.49□□□□□ -0.89
PRPF4-201ENST00000374198 PYGO1Q9Y3Y4 419 aa9.49□□□□□ -0.89
PRPF4-201ENST00000374198 G3V318 75 aa9.48□□□□□ -0.89
PRPF4-201ENST00000374198 FAM222AQ5U5X8 452 aa9.48□□□□□ -0.89
PRPF4-201ENST00000374198 KLLNB2CW77 178 aa9.47□□□□□ -0.89
PRPF4-201ENST00000374198 TINCRA0A1B0GVN0 87 aa9.47□□□□□ -0.89
PRPF4-201ENST00000374198 MRAPQ8TCY5 172 aa9.47□□□□□ -0.89
PRPF4-201ENST00000374198 TACC2O95359 2948 aa9.47□□□□□ -0.89
PRPF4-201ENST00000374198 ABCA4P78363 2273 aa9.47□□□□□ -0.89
PRPF4-201ENST00000374198 B9A039 149 aa9.46□□□□□ -0.89
PRPF4-201ENST00000374198 RNASE13Q5GAN3 156 aaKnown RBP9.46□□□□□ -0.9
PRPF4-201ENST00000374198 MINOS1Q5TGZ0 78 aa9.46□□□□□ -0.9
PRPF4-201ENST00000374198 Q8N2B8 174 aa9.46□□□□□ -0.9
PRPF4-201ENST00000374198 LINC00308Q8TCZ7 52 aa9.46□□□□□ -0.9
PRPF4-201ENST00000374198 RNF152Q8N8N0 203 aa9.46□□□□□ -0.9
PRPF4-201ENST00000374198 CYSRT1A8MQ03 144 aa9.45□□□□□ -0.9
PRPF4-201ENST00000374198 CIRBPQ14011 172 aaKnown RBP9.45□□□□□ -0.9
PRPF4-201ENST00000374198 C9orf85Q96MD7 179 aa9.45□□□□□ -0.9
PRPF4-201ENST00000374198 UNQ9165/PRO28630Q6UXU0 137 aa9.45□□□□□ -0.9
PRPF4-201ENST00000374198 NDUFA1O15239 70 aa9.44□□□□□ -0.9
PRPF4-201ENST00000374198 RS1O15537 224 aa9.44□□□□□ -0.9
PRPF4-201ENST00000374198 FAM218AQ96MZ4 157 aa9.44□□□□□ -0.9
PRPF4-201ENST00000374198 IGHV3-16A0A0C4DH30 117 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms