RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 TRAV8-4A0A0B4J246 113 aa7.93□□□□□ -1.14
LCN2-202ENST00000372998 SFTA2Q6UW10 78 aa7.93□□□□□ -1.14
LCN2-202ENST00000372998 C2orf82Q6UX34 121 aa7.93□□□□□ -1.14
LCN2-202ENST00000372998 TMEM61Q8N0U2 210 aa7.93□□□□□ -1.14
LCN2-202ENST00000372998 MAP6D1Q9H9H5 199 aa7.93□□□□□ -1.14
LCN2-202ENST00000372998 SPTBN2O15020 2390 aa7.93□□□□□ -1.14
LCN2-202ENST00000372998 HIVEP3Q5T1R4 2406 aa7.93□□□□□ -1.14
LCN2-202ENST00000372998 IGHV3-64A0A075B6Q5 118 aa7.92□□□□□ -1.14
LCN2-202ENST00000372998 IGHV4-31P0DP07 118 aa7.92□□□□□ -1.14
LCN2-202ENST00000372998 STHQ8IWL8 128 aa7.92□□□□□ -1.14
LCN2-202ENST00000372998 C11orf72Q8NBR9 251 aa7.92□□□□□ -1.14
LCN2-202ENST00000372998 OVOL2Q9BRP0 275 aa7.92□□□□□ -1.14
LCN2-202ENST00000372998 TRAV4A0A0B4J268 109 aa7.91□□□□□ -1.14
LCN2-202ENST00000372998 H7C2G1 150 aa7.91□□□□□ -1.14
LCN2-202ENST00000372998 LST1O00453 97 aa7.91□□□□□ -1.14
LCN2-202ENST00000372998 TRIAP1O43715 76 aa7.91□□□□□ -1.14
LCN2-202ENST00000372998 PF4P02776 101 aa7.91□□□□□ -1.14
LCN2-202ENST00000372998 RBMY1A1P0DJD3 496 aaKnown RBP7.91□□□□□ -1.14
LCN2-202ENST00000372998 RBMY1CP0DJD4 496 aa7.91□□□□□ -1.14
LCN2-202ENST00000372998 HTN1P15515 57 aa7.91□□□□□ -1.14
LCN2-202ENST00000372998 SLURP1P55000 103 aa7.91□□□□□ -1.14
LCN2-202ENST00000372998 XGP55808 180 aa7.91□□□□□ -1.14
LCN2-202ENST00000372998 GAGE2BQ13066 116 aa7.91□□□□□ -1.14
LCN2-202ENST00000372998 RBMY1FQ15415 496 aaKnown RBP7.91□□□□□ -1.14
LCN2-202ENST00000372998 DEFB114Q30KQ6 69 aa7.91□□□□□ -1.14
LCN2-202ENST00000372998 GAGE2EQ4V326 116 aa7.91□□□□□ -1.14
LCN2-202ENST00000372998 DEFB121Q5J5C9 76 aa7.91□□□□□ -1.14
LCN2-202ENST00000372998 GAGE2DQ9UEU5 116 aa7.91□□□□□ -1.14
LCN2-202ENST00000372998 IGLV5-39A0A0G2JS06 123 aa7.9□□□□□ -1.14
LCN2-202ENST00000372998 MT-ATP8P03928 68 aa7.9□□□□□ -1.14
LCN2-202ENST00000372998 C10orf99Q6UWK7 81 aa7.9□□□□□ -1.14
LCN2-202ENST00000372998 NTN5Q8WTR8 489 aaPredicted RBP7.9□□□□□ -1.14
LCN2-202ENST00000372998 TMEM101Q96IK0 257 aa7.9□□□□□ -1.14
LCN2-202ENST00000372998 SPTA1P02549 2419 aa7.9□□□□□ -1.15
LCN2-202ENST00000372998 COL6A6A6NMZ7 2263 aa7.9□□□□□ -1.15
LCN2-202ENST00000372998 PRRC2AP48634 2157 aaKnown RBP7.89□□□□□ -1.15
LCN2-202ENST00000372998 DMXL1Q9Y485 3027 aa7.89□□□□□ -1.15
LCN2-202ENST00000372998 TRAV8-3A0A0A6YYJ7 113 aa7.89□□□□□ -1.15
LCN2-202ENST00000372998 IGHV3-73A0A0B4J1V6 119 aa7.89□□□□□ -1.15
LCN2-202ENST00000372998 FAM104AQ969W3 186 aa7.89□□□□□ -1.15
LCN2-202ENST00000372998 CITED1Q99966 193 aa7.89□□□□□ -1.15
LCN2-202ENST00000372998 FAM110AQ9BQ89 295 aa7.89□□□□□ -1.15
LCN2-202ENST00000372998 BOD1L1Q8NFC6 3051 aa7.88□□□□□ -1.15
LCN2-202ENST00000372998 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.88□□□□□ -1.15
LCN2-202ENST00000372998 IGKV2-29A2NJV5 120 aaPredicted RBP7.88□□□□□ -1.15
LCN2-202ENST00000372998 RBMY1BA6NDE4 496 aaKnown RBP7.88□□□□□ -1.15
LCN2-202ENST00000372998 RBMY1EA6NEQ0 496 aaKnown RBP7.88□□□□□ -1.15
LCN2-202ENST00000372998 K7EQD1 137 aa7.88□□□□□ -1.15
LCN2-202ENST00000372998 RBMY1DP0C7P1 496 aaKnown RBP7.88□□□□□ -1.15
LCN2-202ENST00000372998 TTC32Q5I0X7 151 aa7.88□□□□□ -1.15
LCN2-202ENST00000372998 IL17DQ8TAD2 202 aa7.88□□□□□ -1.15
LCN2-202ENST00000372998 DEFB104AQ8WTQ1 72 aa7.88□□□□□ -1.15
LCN2-202ENST00000372998 ANAPC13Q9BS18 74 aa7.88□□□□□ -1.15
LCN2-202ENST00000372998 COX7A2LO14548 114 aa7.87□□□□□ -1.15
LCN2-202ENST00000372998 EIF4EBP3O60516 100 aaPredicted RBP7.87□□□□□ -1.15
LCN2-202ENST00000372998 DEFB113Q30KQ7 82 aa7.87□□□□□ -1.15
LCN2-202ENST00000372998 FAM222AQ5U5X8 452 aa7.87□□□□□ -1.15
LCN2-202ENST00000372998 CDKN2A-AS1Q9UH64 79 aa7.87□□□□□ -1.15
LCN2-202ENST00000372998 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.87□□□□□ -1.15
LCN2-202ENST00000372998 CFAP47Q6ZTR5 3102 aa7.87□□□□□ -1.15
LCN2-202ENST00000372998 SPTBN1Q01082 2364 aaKnown RBP7.86□□□□□ -1.15
LCN2-202ENST00000372998 HRNRQ86YZ3 2850 aaPredicted RBP7.86□□□□□ -1.15
LCN2-202ENST00000372998 ADGRG4Q8IZF6 3080 aa7.86□□□□□ -1.15
LCN2-202ENST00000372998 TRAV13-2A0A0B4J235 113 aa7.86□□□□□ -1.15
LCN2-202ENST00000372998 UBE2L6O14933 153 aa7.86□□□□□ -1.15
LCN2-202ENST00000372998 TRACP01848 142 aa7.86□□□□□ -1.15
LCN2-202ENST00000372998 PROK1P58294 105 aa7.86□□□□□ -1.15
LCN2-202ENST00000372998 KHDC1LQ5JSQ8 128 aa7.86□□□□□ -1.15
LCN2-202ENST00000372998 ADAMTSL4-AS1Q5T5F5 129 aa7.86□□□□□ -1.15
LCN2-202ENST00000372998 LINC00308Q8TCZ7 52 aa7.86□□□□□ -1.15
LCN2-202ENST00000372998 IMUPQ9GZP8 106 aa7.86□□□□□ -1.15
LCN2-202ENST00000372998 MED13LQ71F56 2210 aa7.86□□□□□ -1.15
LCN2-202ENST00000372998 NACAE9PAV3 2078 aa7.85□□□□□ -1.15
LCN2-202ENST00000372998 TRAV26-1A0A087WT03 109 aa7.85□□□□□ -1.15
LCN2-202ENST00000372998 ADARB2-AS1A8MUL3 147 aa7.85□□□□□ -1.15
LCN2-202ENST00000372998 MEIG1Q5JSS6 88 aa7.85□□□□□ -1.15
LCN2-202ENST00000372998 CEMP1Q6PRD7 247 aaPredicted RBP7.85□□□□□ -1.15
LCN2-202ENST00000372998 Q6ZSN1 163 aa7.85□□□□□ -1.15
LCN2-202ENST00000372998 C16orf74Q96GX8 76 aa7.85□□□□□ -1.15
LCN2-202ENST00000372998 TMEM243Q9BU79 118 aa7.85□□□□□ -1.15
LCN2-202ENST00000372998 Q9H8V8 135 aa7.85□□□□□ -1.15
LCN2-202ENST00000372998 TRGV1A0A0A0MS02 117 aa7.84□□□□□ -1.15
LCN2-202ENST00000372998 GAGE5Q13069 117 aa7.84□□□□□ -1.15
LCN2-202ENST00000372998 GAGE6Q13070 117 aa7.84□□□□□ -1.15
LCN2-202ENST00000372998 FHL3Q13643 280 aa7.84□□□□□ -1.15
LCN2-202ENST00000372998 LINC00242Q5T6M2 205 aa7.84□□□□□ -1.15
LCN2-202ENST00000372998 IGHV3OR16-12A0A075B7B8 117 aa7.83□□□□□ -1.16
LCN2-202ENST00000372998 TRBV6-4A0A1B0GX49 114 aa7.83□□□□□ -1.16
LCN2-202ENST00000372998 INAFM2P0DMQ5 153 aa7.83□□□□□ -1.16
LCN2-202ENST00000372998 PRIMA1Q86XR5 153 aa7.83□□□□□ -1.16
LCN2-202ENST00000372998 CDC42SE2Q9NRR3 84 aa7.83□□□□□ -1.16
LCN2-202ENST00000372998 DMXL2Q8TDJ6 3036 aa7.83□□□□□ -1.16
LCN2-202ENST00000372998 KALRNO60229 2985 aa7.83□□□□□ -1.16
LCN2-202ENST00000372998 ATMQ13315 3056 aa7.82□□□□□ -1.16
LCN2-202ENST00000372998 SMIM1B2RUZ4 78 aa7.82□□□□□ -1.16
LCN2-202ENST00000372998 DEFB136Q30KP8 78 aa7.82□□□□□ -1.16
LCN2-202ENST00000372998 RNASE13Q5GAN3 156 aaKnown RBP7.82□□□□□ -1.16
LCN2-202ENST00000372998 SHISA2Q6UWI4 295 aa7.82□□□□□ -1.16
LCN2-202ENST00000372998 C1orf158Q8N1D5 194 aa7.82□□□□□ -1.16
LCN2-202ENST00000372998 C15orf53Q8NAA6 179 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms