RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 CEMP1Q6PRD7 247 aaPredicted RBP9.28□□□□□ -0.92
CTPS1-202ENST00000372621 CHCHD7Q9BUK0 85 aa9.28□□□□□ -0.92
CTPS1-202ENST00000372621 BEX4Q9NWD9 120 aaPredicted RBP9.28□□□□□ -0.92
CTPS1-202ENST00000372621 PRRC2AP48634 2157 aaKnown RBP9.28□□□□□ -0.92
CTPS1-202ENST00000372621 CREBBPQ92793 2442 aa9.28□□□□□ -0.92
CTPS1-202ENST00000372621 Q8N2B8 174 aa9.28□□□□□ -0.92
CTPS1-202ENST00000372621 SPXQ9BT56 116 aa9.28□□□□□ -0.92
CTPS1-202ENST00000372621 PPDPFLQ8WWR9 84 aa9.27□□□□□ -0.92
CTPS1-202ENST00000372621 RAX2Q96IS3 184 aa9.27□□□□□ -0.92
CTPS1-202ENST00000372621 TNFRSF18Q9Y5U5 241 aa9.27□□□□□ -0.92
CTPS1-202ENST00000372621 IGHV4-31P0DP07 118 aa9.27□□□□□ -0.93
CTPS1-202ENST00000372621 DUX3Q96PT4 197 aa9.27□□□□□ -0.93
CTPS1-202ENST00000372621 TIMM21Q9BVV7 248 aa9.27□□□□□ -0.93
CTPS1-202ENST00000372621 TMEM61Q8N0U2 210 aa9.27□□□□□ -0.93
CTPS1-202ENST00000372621 C11orf72Q8NBR9 251 aa9.27□□□□□ -0.93
CTPS1-202ENST00000372621 LINC00467Q9BRT7 94 aa9.27□□□□□ -0.93
CTPS1-202ENST00000372621 UBE2D4Q9Y2X8 147 aa9.27□□□□□ -0.93
CTPS1-202ENST00000372621 MYO18BQ8IUG5 2567 aa9.26□□□□□ -0.93
CTPS1-202ENST00000372621 IGHV1-58A0A0C4DH39 117 aa9.26□□□□□ -0.93
CTPS1-202ENST00000372621 M0QXV9 152 aa9.26□□□□□ -0.93
CTPS1-202ENST00000372621 SCGB1C2P0DMR2 95 aa9.26□□□□□ -0.93
CTPS1-202ENST00000372621 ZNF415Q09FC8 603 aa9.26□□□□□ -0.93
CTPS1-202ENST00000372621 POLQO75417 2590 aa9.26□□□□□ -0.93
CTPS1-202ENST00000372621 TRAV8-3A0A0A6YYJ7 113 aa9.26□□□□□ -0.93
CTPS1-202ENST00000372621 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.26□□□□□ -0.93
CTPS1-202ENST00000372621 TINCRA0A1B0GVN0 87 aa9.26□□□□□ -0.93
CTPS1-202ENST00000372621 SPANXA1Q9NS26 97 aa9.26□□□□□ -0.93
CTPS1-202ENST00000372621 ERG28Q9UKR5 140 aa9.26□□□□□ -0.93
CTPS1-202ENST00000372621 MAP6D1Q9H9H5 199 aa9.25□□□□□ -0.93
CTPS1-202ENST00000372621 RNASE13Q5GAN3 156 aaKnown RBP9.25□□□□□ -0.93
CTPS1-202ENST00000372621 ADARB2-AS1A8MUL3 147 aa9.24□□□□□ -0.93
CTPS1-202ENST00000372621 BEAN1Q3B7T3 259 aa9.24□□□□□ -0.93
CTPS1-202ENST00000372621 ANKRD29Q8N6D5 301 aa9.24□□□□□ -0.93
CTPS1-202ENST00000372621 ZNF469Q96JG9 3925 aaPredicted RBP9.24□□□□□ -0.93
CTPS1-202ENST00000372621 IGHV3-53P01767 116 aa9.24□□□□□ -0.93
CTPS1-202ENST00000372621 C4orf3Q8WVX3 66 aa9.24□□□□□ -0.93
CTPS1-202ENST00000372621 VSIG2Q96IQ7 327 aa9.24□□□□□ -0.93
CTPS1-202ENST00000372621 PEMTQ9UBM1 199 aa9.24□□□□□ -0.93
CTPS1-202ENST00000372621 ADAMTSL4-AS1Q5T5F5 129 aa9.24□□□□□ -0.93
CTPS1-202ENST00000372621 SPANXDQ9BXN6 97 aa9.24□□□□□ -0.93
CTPS1-202ENST00000372621 SPANXCQ9NY87 97 aa9.24□□□□□ -0.93
CTPS1-202ENST00000372621 DNAJC30Q96LL9 226 aa9.23□□□□□ -0.93
CTPS1-202ENST00000372621 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.23□□□□□ -0.93
CTPS1-202ENST00000372621 IGKV2-29A2NJV5 120 aaPredicted RBP9.23□□□□□ -0.93
CTPS1-202ENST00000372621 SLC25A20O43772 301 aa9.23□□□□□ -0.93
CTPS1-202ENST00000372621 LINC01600Q96MT4 127 aa9.22□□□□□ -0.93
CTPS1-202ENST00000372621 TRBV30A0A0K0K1B3 111 aa9.22□□□□□ -0.93
CTPS1-202ENST00000372621 Q6ZUT4 128 aa9.22□□□□□ -0.93
CTPS1-202ENST00000372621 NDUFA12Q9UI09 145 aa9.22□□□□□ -0.93
CTPS1-202ENST00000372621 TEX15Q9BXT5 2789 aa9.22□□□□□ -0.93
CTPS1-202ENST00000372621 RS1O15537 224 aa9.22□□□□□ -0.93
CTPS1-202ENST00000372621 DEFB114Q30KQ6 69 aa9.22□□□□□ -0.93
CTPS1-202ENST00000372621 LINC01587Q99440 93 aa9.22□□□□□ -0.93
CTPS1-202ENST00000372621 ACACBO00763 2458 aa9.21□□□□□ -0.93
CTPS1-202ENST00000372621 A8MZ25 164 aa9.21□□□□□ -0.93
CTPS1-202ENST00000372621 C9JAW5 83 aa9.21□□□□□ -0.93
CTPS1-202ENST00000372621 H7C2G1 150 aa9.21□□□□□ -0.93
CTPS1-202ENST00000372621 XGP55808 180 aa9.21□□□□□ -0.94
CTPS1-202ENST00000372621 MT-ATP8P03928 68 aa9.2□□□□□ -0.94
CTPS1-202ENST00000372621 SPINK8P0C7L1 97 aa9.2□□□□□ -0.94
CTPS1-202ENST00000372621 MIAQ16674 131 aa9.2□□□□□ -0.94
CTPS1-202ENST00000372621 ZFAND6Q6FIF0 208 aa9.2□□□□□ -0.94
CTPS1-202ENST00000372621 CENPEQ02224 2701 aa9.2□□□□□ -0.94
CTPS1-202ENST00000372621 IGLV5-45A0A087WSX0 123 aa9.2□□□□□ -0.94
CTPS1-202ENST00000372621 INSP01308 110 aa9.2□□□□□ -0.94
CTPS1-202ENST00000372621 CLUHP3Q96NS8 147 aa9.2□□□□□ -0.94
CTPS1-202ENST00000372621 IGHV3-38A0A0C4DH36 116 aa9.2□□□□□ -0.94
CTPS1-202ENST00000372621 TRIAP1O43715 76 aa9.2□□□□□ -0.94
CTPS1-202ENST00000372621 ATXN8Q156A1 80 aa9.2□□□□□ -0.94
CTPS1-202ENST00000372621 RNF183Q96D59 192 aa9.2□□□□□ -0.94
CTPS1-202ENST00000372621 CIDEAO60543 219 aa9.19□□□□□ -0.94
CTPS1-202ENST00000372621 KRTAP10-9P60411 292 aa9.19□□□□□ -0.94
CTPS1-202ENST00000372621 IL17DQ8TAD2 202 aa9.19□□□□□ -0.94
CTPS1-202ENST00000372621 DYNLRB2Q8TF09 96 aa9.19□□□□□ -0.94
CTPS1-202ENST00000372621 TIRAPP58753 221 aa9.18□□□□□ -0.94
CTPS1-202ENST00000372621 Q1RN00 199 aa9.18□□□□□ -0.94
CTPS1-202ENST00000372621 LINC01620Q4KN68 170 aa9.18□□□□□ -0.94
CTPS1-202ENST00000372621 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.18□□□□□ -0.94
CTPS1-202ENST00000372621 A0A1B0GV72 72 aa9.18□□□□□ -0.94
CTPS1-202ENST00000372621 TIMM17BO60830 172 aa9.18□□□□□ -0.94
CTPS1-202ENST00000372621 PRSS2P07478 247 aa9.18□□□□□ -0.94
CTPS1-202ENST00000372621 MYO9AB2RTY4 2548 aa9.18□□□□□ -0.94
CTPS1-202ENST00000372621 HIST2H2BDQ6DRA6 164 aa9.18□□□□□ -0.94
CTPS1-202ENST00000372621 CDKN2A-AS1Q9UH64 79 aa9.18□□□□□ -0.94
CTPS1-202ENST00000372621 PTPN13Q12923 2485 aa9.18□□□□□ -0.94
CTPS1-202ENST00000372621 FAM208BQ5VWN6 2430 aa9.17□□□□□ -0.94
CTPS1-202ENST00000372621 ODF3L2Q3SX64 289 aa9.17□□□□□ -0.94
CTPS1-202ENST00000372621 UBR5O95071 2799 aaPredicted RBP9.17□□□□□ -0.94
CTPS1-202ENST00000372621 GEMIN7Q9H840 131 aaKnown RBP9.17□□□□□ -0.94
CTPS1-202ENST00000372621 ICOSQ9Y6W8 199 aa9.17□□□□□ -0.94
CTPS1-202ENST00000372621 LRRK2Q5S007 2527 aa9.16□□□□□ -0.94
CTPS1-202ENST00000372621 C1orf158Q8N1D5 194 aa9.16□□□□□ -0.94
CTPS1-202ENST00000372621 TMEM101Q96IK0 257 aa9.16□□□□□ -0.94
CTPS1-202ENST00000372621 IGHV3OR16-12A0A075B7B8 117 aa9.16□□□□□ -0.94
CTPS1-202ENST00000372621 NDUFA1O15239 70 aa9.16□□□□□ -0.94
CTPS1-202ENST00000372621 CKS1BP61024 79 aa9.16□□□□□ -0.94
CTPS1-202ENST00000372621 COX6A2Q02221 97 aa9.16□□□□□ -0.94
CTPS1-202ENST00000372621 DEFB113Q30KQ7 82 aa9.16□□□□□ -0.94
CTPS1-202ENST00000372621 KHDC1LQ5JSQ8 128 aa9.16□□□□□ -0.94
CTPS1-202ENST00000372621 TRBV10-2A0A0K0K1G8 114 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms