RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 TRBV10-2A0A0K0K1G8 114 aa14.72□□□□□ -0.05
LMO4-202ENST00000370544 REG3AQ06141 175 aa14.71□□□□□ -0.05
LMO4-202ENST00000370544 Q8N6K4 173 aa14.71□□□□□ -0.05
LMO4-202ENST00000370544 CRIP1P50238 77 aa14.71□□□□□ -0.05
LMO4-202ENST00000370544 JMJD7-PLA2G4BH0Y9G9 81 aa14.7□□□□□ -0.06
LMO4-202ENST00000370544 HIGD2BQ4VC39 106 aa14.7□□□□□ -0.06
LMO4-202ENST00000370544 NEXN-AS1Q8NBZ9 246 aa14.7□□□□□ -0.06
LMO4-202ENST00000370544 ZNF702PQ9H963 129 aa14.7□□□□□ -0.06
LMO4-202ENST00000370544 CEP192Q8TEP8 1941 aa14.7□□□□□ -0.06
LMO4-202ENST00000370544 PSMB8P28062 276 aa14.7□□□□□ -0.06
LMO4-202ENST00000370544 NREPQ16612 68 aa14.7□□□□□ -0.06
LMO4-202ENST00000370544 PSMG3-AS1Q96PY0 264 aa14.7□□□□□ -0.06
LMO4-202ENST00000370544 TNRC6BQ9UPQ9 1833 aaKnown RBP14.7□□□□□ -0.06
LMO4-202ENST00000370544 SPG11Q96JI7 2443 aa14.69□□□□□ -0.06
LMO4-202ENST00000370544 ARHGAP21Q5T5U3 1957 aa14.69□□□□□ -0.06
LMO4-202ENST00000370544 IGKV3D-7A0A0C4DH55 119 aa14.69□□□□□ -0.06
LMO4-202ENST00000370544 A0A0J9YXY3 114 aa14.69□□□□□ -0.06
LMO4-202ENST00000370544 CFAP126Q5VTH2 177 aa14.68□□□□□ -0.06
LMO4-202ENST00000370544 H7C423 109 aa14.67□□□□□ -0.06
LMO4-202ENST00000370544 H3BT86 120 aa14.67□□□□□ -0.06
LMO4-202ENST00000370544 NDUFB1O75438 58 aa14.67□□□□□ -0.06
LMO4-202ENST00000370544 IL17DQ8TAD2 202 aa14.67□□□□□ -0.06
LMO4-202ENST00000370544 NACAE9PAV3 2078 aa14.67□□□□□ -0.06
LMO4-202ENST00000370544 LINC00482Q8N8I6 264 aa14.66□□□□□ -0.06
LMO4-202ENST00000370544 FOXI1Q12951 378 aa14.66□□□□□ -0.06
LMO4-202ENST00000370544 CHCHD10Q8WYQ3 142 aaPredicted RBP14.66□□□□□ -0.06
LMO4-202ENST00000370544 M0QY20 66 aa14.65□□□□□ -0.06
LMO4-202ENST00000370544 UFSP1Q6NVU6 142 aa14.65□□□□□ -0.06
LMO4-202ENST00000370544 IGLV2-11P01706 119 aa14.65□□□□□ -0.06
LMO4-202ENST00000370544 COX7BP24311 80 aa14.65□□□□□ -0.06
LMO4-202ENST00000370544 HIST2H2BDQ6DRA6 164 aa14.65□□□□□ -0.06
LMO4-202ENST00000370544 LY6G6DO95868 133 aa14.65□□□□□ -0.06
LMO4-202ENST00000370544 RBM3P98179 157 aaKnown RBP14.65□□□□□ -0.06
LMO4-202ENST00000370544 TMEM256-PLSCR3K7ERE1 68 aa14.64□□□□□ -0.07
LMO4-202ENST00000370544 IGLV4-3A0A075B6K6 122 aa14.64□□□□□ -0.07
LMO4-202ENST00000370544 OTOGLQ3ZCN5 2332 aa14.64□□□□□ -0.07
LMO4-202ENST00000370544 RNF185Q96GF1 192 aa14.64□□□□□ -0.07
LMO4-202ENST00000370544 CDKN2A-AS1Q9UH64 79 aa14.63□□□□□ -0.07
LMO4-202ENST00000370544 DEFB131BA0A096LNP1 70 aa14.63□□□□□ -0.07
LMO4-202ENST00000370544 HILS1P60008 231 aa14.63□□□□□ -0.07
LMO4-202ENST00000370544 SPANXCQ9NY87 97 aa14.63□□□□□ -0.07
LMO4-202ENST00000370544 U3KQK5 164 aa14.63□□□□□ -0.07
LMO4-202ENST00000370544 C14orf177Q52M58 125 aa14.63□□□□□ -0.07
LMO4-202ENST00000370544 SHISA2Q6UWI4 295 aa14.63□□□□□ -0.07
LMO4-202ENST00000370544 TMEM223A0PJW6 202 aa14.62□□□□□ -0.07
LMO4-202ENST00000370544 MIFP14174 115 aa14.62□□□□□ -0.07
LMO4-202ENST00000370544 CDSNQ15517 529 aa14.62□□□□□ -0.07
LMO4-202ENST00000370544 ZNF22P17026 224 aaPredicted RBP14.62□□□□□ -0.07
LMO4-202ENST00000370544 FAM110AQ9BQ89 295 aa14.62□□□□□ -0.07
LMO4-202ENST00000370544 CRYGDP07320 174 aa14.61□□□□□ -0.07
LMO4-202ENST00000370544 IGKV2-24A0A0C4DH68 120 aa14.61□□□□□ -0.07
LMO4-202ENST00000370544 SPATA25Q9BR10 227 aa14.61□□□□□ -0.07
LMO4-202ENST00000370544 NOTCH2Q04721 2471 aa14.61□□□□□ -0.07
LMO4-202ENST00000370544 DSCAMO60469 2012 aa14.61□□□□□ -0.07
LMO4-202ENST00000370544 TRBV6-4A0A1B0GX49 114 aa14.61□□□□□ -0.07
LMO4-202ENST00000370544 PROK1P58294 105 aa14.6□□□□□ -0.07
LMO4-202ENST00000370544 LINC01006Q8NI28 216 aa14.6□□□□□ -0.07
LMO4-202ENST00000370544 TRBV6-8A0A0A6YYG3 113 aa14.6□□□□□ -0.07
LMO4-202ENST00000370544 TCL1BO95988 128 aa14.6□□□□□ -0.07
LMO4-202ENST00000370544 IGLV1-40P01703 118 aa14.59□□□□□ -0.07
LMO4-202ENST00000370544 A0A1B0GX51 115 aa14.59□□□□□ -0.07
LMO4-202ENST00000370544 C18orf65Q6ZTR6 163 aa14.59□□□□□ -0.07
LMO4-202ENST00000370544 FAM236AA0A1B0GUQ0 79 aa14.59□□□□□ -0.07
LMO4-202ENST00000370544 FAM236BA0A1B0GV22 79 aa14.59□□□□□ -0.07
LMO4-202ENST00000370544 ATOX1O00244 68 aa14.59□□□□□ -0.07
LMO4-202ENST00000370544 Q6ZS46 218 aa14.59□□□□□ -0.07
LMO4-202ENST00000370544 B9D2Q9BPU9 175 aa14.58□□□□□ -0.08
LMO4-202ENST00000370544 PTH2Q96A98 100 aa14.57□□□□□ -0.08
LMO4-202ENST00000370544 B5MCH6 92 aa14.57□□□□□ -0.08
LMO4-202ENST00000370544 MP68P56378 58 aa14.57□□□□□ -0.08
LMO4-202ENST00000370544 RNASE8Q8TDE3 154 aaKnown RBP14.57□□□□□ -0.08
LMO4-202ENST00000370544 YPEL4Q96NS1 127 aa14.57□□□□□ -0.08
LMO4-202ENST00000370544 PRR9Q5T870 116 aa14.56□□□□□ -0.08
LMO4-202ENST00000370544 TMEM258P61165 79 aa14.56□□□□□ -0.08
LMO4-202ENST00000370544 CSPG4Q6UVK1 2322 aa14.56□□□□□ -0.08
LMO4-202ENST00000370544 TNCP24821 2201 aa14.56□□□□□ -0.08
LMO4-202ENST00000370544 RNASE3P12724 160 aaKnown RBP14.56□□□□□ -0.08
LMO4-202ENST00000370544 C14orf132Q9NPU4 83 aa14.56□□□□□ -0.08
LMO4-202ENST00000370544 C4orf48Q5BLP8 95 aa14.55□□□□□ -0.08
LMO4-202ENST00000370544 TRBV27A0A0K0K1C4 114 aa14.55□□□□□ -0.08
LMO4-202ENST00000370544 PDE6GP18545 87 aa14.55□□□□□ -0.08
LMO4-202ENST00000370544 IGKV2D-26A0A0A0MRZ7 120 aa14.54□□□□□ -0.08
LMO4-202ENST00000370544 TRBV6-5A0A0K0K1A5 114 aa14.54□□□□□ -0.08
LMO4-202ENST00000370544 KIAA1549Q9HCM3 1950 aa14.54□□□□□ -0.08
LMO4-202ENST00000370544 PRR14LQ5THK1 2151 aa14.54□□□□□ -0.08
LMO4-202ENST00000370544 BBC3Q96PG8 261 aaPredicted RBP14.53□□□□□ -0.08
LMO4-202ENST00000370544 C11orf21Q9P2W6 132 aa14.53□□□□□ -0.08
LMO4-202ENST00000370544 KLLNB2CW77 178 aa14.53□□□□□ -0.08
LMO4-202ENST00000370544 LRP4O75096 1905 aa14.53□□□□□ -0.08
LMO4-202ENST00000370544 IBA57-AS1B1ANH7 110 aa14.53□□□□□ -0.08
LMO4-202ENST00000370544 SPANXB1Q9NS25 103 aaPredicted RBP14.53□□□□□ -0.08
LMO4-202ENST00000370544 RNF183Q96D59 192 aa14.52□□□□□ -0.08
LMO4-202ENST00000370544 TP73-AS1Q9UF72 201 aa14.52□□□□□ -0.08
LMO4-202ENST00000370544 WFDC10AQ9H1F0 79 aa14.52□□□□□ -0.09
LMO4-202ENST00000370544 Q8N976 141 aa14.52□□□□□ -0.09
LMO4-202ENST00000370544 LINC00308Q8TCZ7 52 aa14.52□□□□□ -0.09
LMO4-202ENST00000370544 PYGO1Q9Y3Y4 419 aa14.51□□□□□ -0.09
LMO4-202ENST00000370544 PTPRSQ13332 1948 aa14.51□□□□□ -0.09
LMO4-202ENST00000370544 MAPKAPK5-AS1Q8N8E1 139 aa14.51□□□□□ -0.09
LMO4-202ENST00000370544 NRACQ8N912 160 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms