RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 LOC400499M0QZD8 3231 aa6.29□□□□□ -1.4
PTPRK-206ENST00000368215 LGALS9O00182 355 aa6.29□□□□□ -1.4
PTPRK-206ENST00000368215 CKS1BP61024 79 aa6.29□□□□□ -1.4
PTPRK-206ENST00000368215 Q9H8V8 135 aa6.29□□□□□ -1.4
PTPRK-206ENST00000368215 M0QY20 66 aa6.29□□□□□ -1.4
PTPRK-206ENST00000368215 CRPP02741 224 aa6.29□□□□□ -1.4
PTPRK-206ENST00000368215 DEFB114Q30KQ6 69 aa6.29□□□□□ -1.4
PTPRK-206ENST00000368215 SPANXA1Q9NS26 97 aa6.28□□□□□ -1.4
PTPRK-206ENST00000368215 ESM1Q9NQ30 184 aa6.28□□□□□ -1.4
PTPRK-206ENST00000368215 TRBV20-1A0A075B6N2 111 aa6.28□□□□□ -1.4
PTPRK-206ENST00000368215 TRAV8-4A0A0B4J246 113 aa6.28□□□□□ -1.4
PTPRK-206ENST00000368215 A0A0J9YY99 117 aa6.28□□□□□ -1.4
PTPRK-206ENST00000368215 F5H768 121 aa6.28□□□□□ -1.4
PTPRK-206ENST00000368215 CFC1BP0CG36 223 aa6.28□□□□□ -1.4
PTPRK-206ENST00000368215 CFC1P0CG37 223 aa6.28□□□□□ -1.4
PTPRK-206ENST00000368215 COX8CQ7Z4L0 72 aa6.28□□□□□ -1.4
PTPRK-206ENST00000368215 IGHV4-4A0A075B6R2 117 aa6.28□□□□□ -1.4
PTPRK-206ENST00000368215 HERVK_113P63121 156 aa6.28□□□□□ -1.4
PTPRK-206ENST00000368215 Q6ZTI0 123 aa6.28□□□□□ -1.4
PTPRK-206ENST00000368215 Q6ZUT4 128 aa6.27□□□□□ -1.41
PTPRK-206ENST00000368215 ODF3Q96PU9 254 aa6.27□□□□□ -1.41
PTPRK-206ENST00000368215 RBMY1BA6NDE4 496 aaKnown RBP6.27□□□□□ -1.41
PTPRK-206ENST00000368215 RBMY1EA6NEQ0 496 aaKnown RBP6.27□□□□□ -1.41
PTPRK-206ENST00000368215 K7EQD1 137 aa6.27□□□□□ -1.41
PTPRK-206ENST00000368215 TSPAN13O95857 204 aa6.27□□□□□ -1.41
PTPRK-206ENST00000368215 RBMY1DP0C7P1 496 aaKnown RBP6.27□□□□□ -1.41
PTPRK-206ENST00000368215 RBMY1A1P0DJD3 496 aaKnown RBP6.27□□□□□ -1.41
PTPRK-206ENST00000368215 RBMY1CP0DJD4 496 aa6.27□□□□□ -1.41
PTPRK-206ENST00000368215 DMXL2Q8TDJ6 3036 aa6.27□□□□□ -1.41
PTPRK-206ENST00000368215 TRBV7-3A0A075B6L6 115 aa6.27□□□□□ -1.41
PTPRK-206ENST00000368215 CRIP2P52943 208 aaPredicted RBP6.27□□□□□ -1.41
PTPRK-206ENST00000368215 PSMG3-AS1Q96PY0 264 aa6.27□□□□□ -1.41
PTPRK-206ENST00000368215 HHLA3Q9XRX5 114 aa6.27□□□□□ -1.41
PTPRK-206ENST00000368215 SLC25A20O43772 301 aa6.26□□□□□ -1.41
PTPRK-206ENST00000368215 NXPH4O95158 308 aa6.26□□□□□ -1.41
PTPRK-206ENST00000368215 DAD1P61803 113 aa6.26□□□□□ -1.41
PTPRK-206ENST00000368215 C5orf38Q86SI9 138 aa6.26□□□□□ -1.41
PTPRK-206ENST00000368215 TMEM86BQ8N661 226 aa6.26□□□□□ -1.41
PTPRK-206ENST00000368215 RNF152Q8N8N0 203 aa6.26□□□□□ -1.41
PTPRK-206ENST00000368215 SOCS3O14543 225 aa6.26□□□□□ -1.41
PTPRK-206ENST00000368215 DEFB4AO15263 64 aa6.26□□□□□ -1.41
PTPRK-206ENST00000368215 CRYGDP07320 174 aa6.26□□□□□ -1.41
PTPRK-206ENST00000368215 IGHV3-30-3P0DP02 117 aa6.26□□□□□ -1.41
PTPRK-206ENST00000368215 SS18Q15532 418 aa6.26□□□□□ -1.41
PTPRK-206ENST00000368215 GAGE12HA6NDE8 117 aa6.25□□□□□ -1.41
PTPRK-206ENST00000368215 XCL1P47992 114 aa6.25□□□□□ -1.41
PTPRK-206ENST00000368215 POLR2KP53803 58 aaKnown RBP6.25□□□□□ -1.41
PTPRK-206ENST00000368215 C10orf126Q8N4M7 172 aa6.25□□□□□ -1.41
PTPRK-206ENST00000368215 DNAJC30Q96LL9 226 aa6.25□□□□□ -1.41
PTPRK-206ENST00000368215 BBC3Q96PG8 261 aaPredicted RBP6.25□□□□□ -1.41
PTPRK-206ENST00000368215 IGLV4-3A0A075B6K6 122 aa6.25□□□□□ -1.41
PTPRK-206ENST00000368215 PPDPFLQ8WWR9 84 aa6.25□□□□□ -1.41
PTPRK-206ENST00000368215 PTH2Q96A98 100 aa6.25□□□□□ -1.41
PTPRK-206ENST00000368215 LINC00467Q9BRT7 94 aa6.25□□□□□ -1.41
PTPRK-206ENST00000368215 WFDC10AQ9H1F0 79 aa6.25□□□□□ -1.41
PTPRK-206ENST00000368215 TRBV27A0A0K0K1C4 114 aa6.25□□□□□ -1.41
PTPRK-206ENST00000368215 LRRC75A-AS1Q8N1F1 130 aa6.25□□□□□ -1.41
PTPRK-206ENST00000368215 NTN5Q8WTR8 489 aaPredicted RBP6.25□□□□□ -1.41
PTPRK-206ENST00000368215 TM2D2Q9BX73 214 aa6.25□□□□□ -1.41
PTPRK-206ENST00000368215 TRAV25A0A0B4J276 109 aa6.24□□□□□ -1.41
PTPRK-206ENST00000368215 ZNF22P17026 224 aaPredicted RBP6.24□□□□□ -1.41
PTPRK-206ENST00000368215 C16orf74Q96GX8 76 aa6.24□□□□□ -1.41
PTPRK-206ENST00000368215 C9orf85Q96MD7 179 aa6.24□□□□□ -1.41
PTPRK-206ENST00000368215 DMXL1Q9Y485 3027 aa6.24□□□□□ -1.41
PTPRK-206ENST00000368215 A8MZ25 164 aa6.24□□□□□ -1.41
PTPRK-206ENST00000368215 GYPEP15421 78 aa6.24□□□□□ -1.41
PTPRK-206ENST00000368215 CFAP126Q5VTH2 177 aa6.24□□□□□ -1.41
PTPRK-206ENST00000368215 IGLV2-18A0A075B6J9 118 aa6.23□□□□□ -1.41
PTPRK-206ENST00000368215 CRLF1O75462 422 aa6.23□□□□□ -1.41
PTPRK-206ENST00000368215 TSHBP01222 138 aa6.23□□□□□ -1.41
PTPRK-206ENST00000368215 ANGP03950 147 aaKnown RBP6.23□□□□□ -1.41
PTPRK-206ENST00000368215 S100A7L2Q5SY68 101 aa6.23□□□□□ -1.41
PTPRK-206ENST00000368215 NDUFA11Q86Y39 141 aa6.23□□□□□ -1.41
PTPRK-206ENST00000368215 GAGE2BQ13066 116 aa6.23□□□□□ -1.41
PTPRK-206ENST00000368215 DAZ2Q13117 558 aaKnown RBP6.23□□□□□ -1.41
PTPRK-206ENST00000368215 GAGE2EQ4V326 116 aa6.23□□□□□ -1.41
PTPRK-206ENST00000368215 DAZ4Q86SG3 579 aaKnown RBP6.23□□□□□ -1.41
PTPRK-206ENST00000368215 TMEM263Q8WUH6 116 aaKnown RBP6.23□□□□□ -1.41
PTPRK-206ENST00000368215 VSIG2Q96IQ7 327 aa6.23□□□□□ -1.41
PTPRK-206ENST00000368215 DAZ3Q9NR90 486 aaKnown RBP6.23□□□□□ -1.41
PTPRK-206ENST00000368215 GAGE2DQ9UEU5 116 aa6.23□□□□□ -1.41
PTPRK-206ENST00000368215 IGHV1-58A0A0C4DH39 117 aa6.23□□□□□ -1.41
PTPRK-206ENST00000368215 CDKN2A-AS1Q9UH64 79 aa6.23□□□□□ -1.41
PTPRK-206ENST00000368215 IGLV10-54A0A075B6I4 117 aa6.22□□□□□ -1.41
PTPRK-206ENST00000368215 UBE2WQ96B02 151 aa6.22□□□□□ -1.41
PTPRK-206ENST00000368215 CARD19Q96LW7 228 aa6.22□□□□□ -1.41
PTPRK-206ENST00000368215 CFAP47Q6ZTR5 3102 aa6.22□□□□□ -1.41
PTPRK-206ENST00000368215 TRBV6-5A0A0K0K1A5 114 aa6.22□□□□□ -1.41
PTPRK-206ENST00000368215 ANAPC13Q9BS18 74 aa6.22□□□□□ -1.41
PTPRK-206ENST00000368215 ATMQ13315 3056 aa6.22□□□□□ -1.41
PTPRK-206ENST00000368215 DEFB135Q30KP9 77 aa6.22□□□□□ -1.41
PTPRK-206ENST00000368215 WDFY3Q8IZQ1 3526 aa6.22□□□□□ -1.41
PTPRK-206ENST00000368215 A0A0J9YXY3 114 aa6.22□□□□□ -1.41
PTPRK-206ENST00000368215 PRSS47A8MTI9 375 aa6.22□□□□□ -1.41
PTPRK-206ENST00000368215 SLC25A29Q8N8R3 303 aa6.22□□□□□ -1.41
PTPRK-206ENST00000368215 SCGB1A1P11684 91 aa6.21□□□□□ -1.41
PTPRK-206ENST00000368215 NFE4Q86UQ8 179 aa6.21□□□□□ -1.41
PTPRK-206ENST00000368215 LINC01006Q8NI28 216 aa6.21□□□□□ -1.41
PTPRK-206ENST00000368215 ZMAT4Q9H898 229 aa6.21□□□□□ -1.41
PTPRK-206ENST00000368215 ZFAND6Q6FIF0 208 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms