RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 MLST8Q9BVC4 326 aa6.83□□□□□ -1.32
SYNE1-209ENST00000367257 UPK3BQ9BT76 320 aa6.83□□□□□ -1.32
SYNE1-209ENST00000367257 PMAIP1Q13794 54 aa6.83□□□□□ -1.32
SYNE1-209ENST00000367257 COX7BP24311 80 aa6.83□□□□□ -1.32
SYNE1-209ENST00000367257 COL27A1Q8IZC6 1860 aaPredicted RBP6.82□□□□□ -1.32
SYNE1-209ENST00000367257 IGKV1OR2-108A0A075B7D4 117 aa6.82□□□□□ -1.32
SYNE1-209ENST00000367257 PRB2P02812 416 aaPredicted RBP6.82□□□□□ -1.32
SYNE1-209ENST00000367257 DEFB113Q30KQ7 82 aa6.82□□□□□ -1.32
SYNE1-209ENST00000367257 EML5Q05BV3 1969 aa6.82□□□□□ -1.32
SYNE1-209ENST00000367257 SPRY4Q9C004 299 aa6.82□□□□□ -1.32
SYNE1-209ENST00000367257 DKK4Q9UBT3 224 aa6.82□□□□□ -1.32
SYNE1-209ENST00000367257 RPS28P62857 69 aaKnown RBP6.82□□□□□ -1.32
SYNE1-209ENST00000367257 MUC6Q6W4X9 2439 aa6.81□□□□□ -1.32
SYNE1-209ENST00000367257 A0A0J9YX75 114 aa6.81□□□□□ -1.32
SYNE1-209ENST00000367257 F8WDY8 70 aa6.81□□□□□ -1.32
SYNE1-209ENST00000367257 SPAG11BQ08648 103 aa6.81□□□□□ -1.32
SYNE1-209ENST00000367257 C5orf38Q86SI9 138 aa6.81□□□□□ -1.32
SYNE1-209ENST00000367257 Q8N976 141 aa6.81□□□□□ -1.32
SYNE1-209ENST00000367257 SIRPDQ9H106 197 aa6.81□□□□□ -1.32
SYNE1-209ENST00000367257 PRO0255Q9UI72 69 aa6.81□□□□□ -1.32
SYNE1-209ENST00000367257 LECT2O14960 151 aa6.81□□□□□ -1.32
SYNE1-209ENST00000367257 CGB7P0DN87 165 aa6.81□□□□□ -1.32
SYNE1-209ENST00000367257 ZNF524Q96C55 264 aa6.81□□□□□ -1.32
SYNE1-209ENST00000367257 HHLA3Q9XRX5 114 aa6.81□□□□□ -1.32
SYNE1-209ENST00000367257 CACNA1AO00555 2505 aa6.8□□□□□ -1.32
SYNE1-209ENST00000367257 PCNX2A6NKB5 2137 aa6.8□□□□□ -1.32
SYNE1-209ENST00000367257 TCF20Q9UGU0 1960 aaKnown RBP6.8□□□□□ -1.32
SYNE1-209ENST00000367257 IBA57-AS1B1ANH7 110 aa6.8□□□□□ -1.32
SYNE1-209ENST00000367257 IGHV4-59P01825 116 aa6.8□□□□□ -1.32
SYNE1-209ENST00000367257 B9D2Q9BPU9 175 aa6.8□□□□□ -1.32
SYNE1-209ENST00000367257 ARHGEF17Q96PE2 2063 aaPredicted RBP6.8□□□□□ -1.32
SYNE1-209ENST00000367257 TRBV30A0A0K0K1B3 111 aa6.8□□□□□ -1.32
SYNE1-209ENST00000367257 GATA1P15976 413 aaPredicted RBP6.8□□□□□ -1.32
SYNE1-209ENST00000367257 WT1P19544 449 aaPredicted RBP6.8□□□□□ -1.32
SYNE1-209ENST00000367257 LRP4O75096 1905 aa6.8□□□□□ -1.32
SYNE1-209ENST00000367257 IGHV3-30-3P0DP02 117 aa6.8□□□□□ -1.32
SYNE1-209ENST00000367257 ODF3L1Q8IXM7 274 aa6.8□□□□□ -1.32
SYNE1-209ENST00000367257 MED12Q93074 2177 aa6.8□□□□□ -1.32
SYNE1-209ENST00000367257 U3KQK5 164 aa6.79□□□□□ -1.32
SYNE1-209ENST00000367257 MED13LQ71F56 2210 aa6.79□□□□□ -1.32
SYNE1-209ENST00000367257 NAV3Q8IVL0 2385 aa6.79□□□□□ -1.32
SYNE1-209ENST00000367257 C14orf132Q9NPU4 83 aa6.79□□□□□ -1.32
SYNE1-209ENST00000367257 KLK5Q9Y337 293 aaPredicted RBP6.79□□□□□ -1.32
SYNE1-209ENST00000367257 PYGO1Q9Y3Y4 419 aa6.79□□□□□ -1.32
SYNE1-209ENST00000367257 UBE2AP49459 152 aa6.79□□□□□ -1.32
SYNE1-209ENST00000367257 PIK3CD-AS1Q5SR53 167 aa6.79□□□□□ -1.32
SYNE1-209ENST00000367257 A6NDX4 124 aa6.78□□□□□ -1.32
SYNE1-209ENST00000367257 RNASE13Q5GAN3 156 aaKnown RBP6.78□□□□□ -1.32
SYNE1-209ENST00000367257 KMT2EQ8IZD2 1858 aa6.78□□□□□ -1.32
SYNE1-209ENST00000367257 C10orf142B7Z368 130 aa6.78□□□□□ -1.32
SYNE1-209ENST00000367257 IGLV2-14P01704 120 aa6.78□□□□□ -1.32
SYNE1-209ENST00000367257 BLCAPP62952 87 aa6.78□□□□□ -1.32
SYNE1-209ENST00000367257 Q6ZQT7 251 aa6.78□□□□□ -1.32
SYNE1-209ENST00000367257 MBD6Q96DN6 1003 aa6.78□□□□□ -1.32
SYNE1-209ENST00000367257 DCHS1Q96JQ0 3298 aa6.78□□□□□ -1.32
SYNE1-209ENST00000367257 TNFRSF13BO14836 293 aaPredicted RBP6.78□□□□□ -1.32
SYNE1-209ENST00000367257 MIR7-3HGQ8N6C7 128 aa6.78□□□□□ -1.32
SYNE1-209ENST00000367257 NEXN-AS1Q8NBZ9 246 aa6.78□□□□□ -1.32
SYNE1-209ENST00000367257 TRBV6-5A0A0K0K1A5 114 aa6.78□□□□□ -1.32
SYNE1-209ENST00000367257 ODF3BA8MYP8 253 aa6.78□□□□□ -1.32
SYNE1-209ENST00000367257 CDIP1Q9H305 208 aa6.78□□□□□ -1.32
SYNE1-209ENST00000367257 IGF1P05019 195 aa6.77□□□□□ -1.32
SYNE1-209ENST00000367257 GDF5OSQ5U4N7 250 aa6.77□□□□□ -1.32
SYNE1-209ENST00000367257 BDP1A6H8Y1 2624 aa6.77□□□□□ -1.32
SYNE1-209ENST00000367257 BPY2O14599 106 aa6.77□□□□□ -1.33
SYNE1-209ENST00000367257 C4orf48Q5BLP8 95 aa6.77□□□□□ -1.33
SYNE1-209ENST00000367257 MSRB1Q9NZV6 116 aa6.77□□□□□ -1.33
SYNE1-209ENST00000367257 PI4KAP42356 2102 aa6.77□□□□□ -1.33
SYNE1-209ENST00000367257 IGKV2D-26A0A0A0MRZ7 120 aa6.77□□□□□ -1.33
SYNE1-209ENST00000367257 DEFB105AQ8NG35 78 aa6.77□□□□□ -1.33
SYNE1-209ENST00000367257 PRR15LQ9BU68 103 aa6.77□□□□□ -1.33
SYNE1-209ENST00000367257 TICRRQ7Z2Z1 1910 aa6.77□□□□□ -1.33
SYNE1-209ENST00000367257 SLURP1P55000 103 aa6.76□□□□□ -1.33
SYNE1-209ENST00000367257 EBI3Q14213 229 aa6.76□□□□□ -1.33
SYNE1-209ENST00000367257 NFE4Q86UQ8 179 aa6.76□□□□□ -1.33
SYNE1-209ENST00000367257 IGHV4OR15-8A0A075B7B6 117 aa6.76□□□□□ -1.33
SYNE1-209ENST00000367257 A0A087WW49 117 aa6.76□□□□□ -1.33
SYNE1-209ENST00000367257 IGHV4-61A0A0C4DH41 118 aa6.76□□□□□ -1.33
SYNE1-209ENST00000367257 A0A0J9YY99 117 aa6.76□□□□□ -1.33
SYNE1-209ENST00000367257 CLPSL1A2RUU4 121 aa6.76□□□□□ -1.33
SYNE1-209ENST00000367257 ENHOQ6UWT2 76 aa6.76□□□□□ -1.33
SYNE1-209ENST00000367257 ZFAND2AQ8N6M9 145 aa6.76□□□□□ -1.33
SYNE1-209ENST00000367257 IGKV1D-37A0A075B6S9 117 aa6.75□□□□□ -1.33
SYNE1-209ENST00000367257 TMEM223A0PJW6 202 aa6.75□□□□□ -1.33
SYNE1-209ENST00000367257 IGLV2-8P01709 118 aa6.75□□□□□ -1.33
SYNE1-209ENST00000367257 IGHV3-33P01772 117 aa6.75□□□□□ -1.33
SYNE1-209ENST00000367257 LINC00310P59036 64 aa6.75□□□□□ -1.33
SYNE1-209ENST00000367257 K7ERS5 55 aa6.75□□□□□ -1.33
SYNE1-209ENST00000367257 RPL39P62891 51 aaKnown RBP6.75□□□□□ -1.33
SYNE1-209ENST00000367257 C4orf26Q17RF5 130 aa6.75□□□□□ -1.33
SYNE1-209ENST00000367257 MRGPRG-AS1Q2M3A8 158 aa6.75□□□□□ -1.33
SYNE1-209ENST00000367257 CLPSL2Q6UWE3 100 aa6.75□□□□□ -1.33
SYNE1-209ENST00000367257 MAPKAPK5-AS1Q8N8E1 139 aa6.75□□□□□ -1.33
SYNE1-209ENST00000367257 SNURFQ9Y675 71 aa6.75□□□□□ -1.33
SYNE1-209ENST00000367257 TRIAP1O43715 76 aa6.75□□□□□ -1.33
SYNE1-209ENST00000367257 Q8N7P7 452 aa6.75□□□□□ -1.33
SYNE1-209ENST00000367257 FANCMQ8IYD8 2048 aa6.75□□□□□ -1.33
SYNE1-209ENST00000367257 A6NED7 52 aa6.74□□□□□ -1.33
SYNE1-209ENST00000367257 PRAC2D3DTV9 90 aa6.74□□□□□ -1.33
SYNE1-209ENST00000367257 DAND5Q8N907 189 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms