RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 SMKR1H3BMG3 65 aa11.79□□□□□ -0.52
PRKN-202ENST00000366892 RTL8CO15255 209 aa11.79□□□□□ -0.52
PRKN-202ENST00000366892 HNRNPA3P51991 378 aaKnown RBP11.79□□□□□ -0.52
PRKN-202ENST00000366892 RPL32P62910 135 aaKnown RBP11.79□□□□□ -0.52
PRKN-202ENST00000366892 PMCHL2Q9BQD1 86 aa11.79□□□□□ -0.52
PRKN-202ENST00000366892 TRAV26-1A0A087WT03 109 aa11.78□□□□□ -0.52
PRKN-202ENST00000366892 ATP5LO75964 103 aa11.78□□□□□ -0.52
PRKN-202ENST00000366892 RNASE3P12724 160 aaKnown RBP11.78□□□□□ -0.52
PRKN-202ENST00000366892 LINC00173Q6ZV60 143 aa11.78□□□□□ -0.52
PRKN-202ENST00000366892 SYT8Q8NBV8 401 aa11.78□□□□□ -0.52
PRKN-202ENST00000366892 IFI27L1Q96BM0 104 aa11.78□□□□□ -0.52
PRKN-202ENST00000366892 NACAE9PAV3 2078 aa11.78□□□□□ -0.52
PRKN-202ENST00000366892 TRGV11A0A075B6L2 103 aa11.77□□□□□ -0.52
PRKN-202ENST00000366892 IGHV1OR15-1A0A075B7D0 117 aa11.77□□□□□ -0.52
PRKN-202ENST00000366892 G0S2P27469 103 aa11.77□□□□□ -0.52
PRKN-202ENST00000366892 ORMDL2Q53FV1 153 aa11.77□□□□□ -0.52
PRKN-202ENST00000366892 DNAH11Q96DT5 4516 aa11.77□□□□□ -0.53
PRKN-202ENST00000366892 DYNC1H1Q14204 4646 aaKnown RBP11.77□□□□□ -0.53
PRKN-202ENST00000366892 A0A0J9YY99 117 aa11.76□□□□□ -0.53
PRKN-202ENST00000366892 SMIM17P0DL12 118 aa11.76□□□□□ -0.53
PRKN-202ENST00000366892 CCL18P55774 89 aa11.76□□□□□ -0.53
PRKN-202ENST00000366892 LAGE3Q14657 143 aa11.76□□□□□ -0.53
PRKN-202ENST00000366892 Q6ZN92 141 aa11.76□□□□□ -0.53
PRKN-202ENST00000366892 C18orf15Q96N68 181 aa11.76□□□□□ -0.53
PRKN-202ENST00000366892 SMIM2Q9BVW6 85 aa11.76□□□□□ -0.53
PRKN-202ENST00000366892 SNHG12Q9BXW3 62 aa11.76□□□□□ -0.53
PRKN-202ENST00000366892 LINC00588Q9Y4M8 146 aa11.76□□□□□ -0.53
PRKN-202ENST00000366892 TRGV1A0A0A0MS02 117 aa11.76□□□□□ -0.53
PRKN-202ENST00000366892 PRSS29PA6NIE9 313 aa11.76□□□□□ -0.53
PRKN-202ENST00000366892 ATOH7Q8N100 152 aa11.76□□□□□ -0.53
PRKN-202ENST00000366892 ZNRF2Q8NHG8 242 aa11.76□□□□□ -0.53
PRKN-202ENST00000366892 C9orf85Q96MD7 179 aa11.76□□□□□ -0.53
PRKN-202ENST00000366892 HERC2O95714 4834 aa11.75□□□□□ -0.53
PRKN-202ENST00000366892 TRGV2A0A075B6R0 118 aa11.75□□□□□ -0.53
PRKN-202ENST00000366892 A0A1B0GVY2 172 aa11.75□□□□□ -0.53
PRKN-202ENST00000366892 KIAA1109Q2LD37 5005 aa11.74□□□□□ -0.53
PRKN-202ENST00000366892 EREGO14944 169 aa11.74□□□□□ -0.53
PRKN-202ENST00000366892 SUMO2P61956 95 aaKnown RBP11.74□□□□□ -0.53
PRKN-202ENST00000366892 PIK3CD-AS1Q5SR53 167 aa11.74□□□□□ -0.53
PRKN-202ENST00000366892 H3BNG1 76 aa11.73□□□□□ -0.53
PRKN-202ENST00000366892 SLC25A34Q6PIV7 304 aa11.73□□□□□ -0.53
PRKN-202ENST00000366892 IGHV3-16A0A0C4DH30 117 aa11.72□□□□□ -0.53
PRKN-202ENST00000366892 GNRH2O43555 120 aa11.72□□□□□ -0.53
PRKN-202ENST00000366892 C1orf134Q5TEV5 83 aa11.72□□□□□ -0.53
PRKN-202ENST00000366892 VSIG2Q96IQ7 327 aa11.72□□□□□ -0.53
PRKN-202ENST00000366892 NBDYA0A0U1RRE5 68 aa11.71□□□□□ -0.53
PRKN-202ENST00000366892 MDFICQ9P1T7 246 aa11.71□□□□□ -0.53
PRKN-202ENST00000366892 TCAPO15273 167 aa11.7□□□□□ -0.54
PRKN-202ENST00000366892 ESRGQ1W209 222 aa11.7□□□□□ -0.54
PRKN-202ENST00000366892 COL5A1-AS1Q5SY13 56 aa11.7□□□□□ -0.54
PRKN-202ENST00000366892 C14orf178Q8N769 122 aaPredicted RBP11.7□□□□□ -0.54
PRKN-202ENST00000366892 RASL10AQ92737 203 aa11.7□□□□□ -0.54
PRKN-202ENST00000366892 PTH2Q96A98 100 aa11.7□□□□□ -0.54
PRKN-202ENST00000366892 MRPL16Q9NX20 251 aaKnown RBP11.7□□□□□ -0.54
PRKN-202ENST00000366892 KIF25-AS1Q9Y6Z4 181 aa11.7□□□□□ -0.54
PRKN-202ENST00000366892 MUC4Q99102 2169 aa11.7□□□□□ -0.54
PRKN-202ENST00000366892 MGPP08493 103 aa11.7□□□□□ -0.54
PRKN-202ENST00000366892 GATA1P15976 413 aaPredicted RBP11.7□□□□□ -0.54
PRKN-202ENST00000366892 ZNF415Q09FC8 603 aa11.7□□□□□ -0.54
PRKN-202ENST00000366892 Q9H8V8 135 aa11.7□□□□□ -0.54
PRKN-202ENST00000366892 TRBV6-5A0A0K0K1A5 114 aa11.69□□□□□ -0.54
PRKN-202ENST00000366892 H0Y8G0 127 aa11.69□□□□□ -0.54
PRKN-202ENST00000366892 COX8AP10176 69 aa11.69□□□□□ -0.54
PRKN-202ENST00000366892 MAJINQ3KP22 176 aa11.69□□□□□ -0.54
PRKN-202ENST00000366892 A0A096LPF7 62 aa11.68□□□□□ -0.54
PRKN-202ENST00000366892 TRAV12-1A0A0B4J245 112 aa11.68□□□□□ -0.54
PRKN-202ENST00000366892 TRAV26-2A0A0B4J265 109 aa11.68□□□□□ -0.54
PRKN-202ENST00000366892 hDV102S1A0JD36 115 aa11.68□□□□□ -0.54
PRKN-202ENST00000366892 DLEU1O43261 78 aa11.68□□□□□ -0.54
PRKN-202ENST00000366892 GAS8-AS1O95177 125 aa11.68□□□□□ -0.54
PRKN-202ENST00000366892 IGHV3-53P01767 116 aa11.68□□□□□ -0.54
PRKN-202ENST00000366892 LINC00315P59091 139 aa11.67□□□□□ -0.54
PRKN-202ENST00000366892 FHL2Q14192 279 aa11.66□□□□□ -0.54
PRKN-202ENST00000366892 TOMM6Q96B49 74 aa11.66□□□□□ -0.54
PRKN-202ENST00000366892 SPXQ9BT56 116 aa11.66□□□□□ -0.54
PRKN-202ENST00000366892 UPK3BQ9BT76 320 aa11.66□□□□□ -0.54
PRKN-202ENST00000366892 A0A1B0GV90 55 aa11.65□□□□□ -0.54
PRKN-202ENST00000366892 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.65□□□□□ -0.54
PRKN-202ENST00000366892 H7C1H1 209 aa11.65□□□□□ -0.54
PRKN-202ENST00000366892 PAX4O43316 350 aa11.65□□□□□ -0.54
PRKN-202ENST00000366892 PRSS1P07477 247 aa11.65□□□□□ -0.54
PRKN-202ENST00000366892 ODF1Q14990 250 aa11.65□□□□□ -0.54
PRKN-202ENST00000366892 C6orf223Q8N319 242 aa11.65□□□□□ -0.54
PRKN-202ENST00000366892 PRO0255Q9UI72 69 aa11.65□□□□□ -0.54
PRKN-202ENST00000366892 HHLA3Q9XRX5 114 aa11.65□□□□□ -0.54
PRKN-202ENST00000366892 VCYO14598 125 aa11.65□□□□□ -0.55
PRKN-202ENST00000366892 SIVA1O15304 175 aa11.65□□□□□ -0.55
PRKN-202ENST00000366892 DPM2O94777 84 aa11.65□□□□□ -0.55
PRKN-202ENST00000366892 CRYBA4P53673 196 aa11.65□□□□□ -0.55
PRKN-202ENST00000366892 IGKCP01834 107 aa11.64□□□□□ -0.55
PRKN-202ENST00000366892 PLNP26678 52 aa11.64□□□□□ -0.55
PRKN-202ENST00000366892 SUMO4Q6EEV6 95 aa11.64□□□□□ -0.55
PRKN-202ENST00000366892 KIR2DL4Q99706 377 aa11.64□□□□□ -0.55
PRKN-202ENST00000366892 A0A087WX48 190 aa11.63□□□□□ -0.55
PRKN-202ENST00000366892 POLR2KP53803 58 aaKnown RBP11.63□□□□□ -0.55
PRKN-202ENST00000366892 ZNF479Q96JC4 524 aa11.63□□□□□ -0.55
PRKN-202ENST00000366892 KRTAP1-5Q9BYS1 174 aa11.63□□□□□ -0.55
PRKN-202ENST00000366892 A8MWV9 139 aa11.62□□□□□ -0.55
PRKN-202ENST00000366892 TNP2Q05952 138 aa11.62□□□□□ -0.55
PRKN-202ENST00000366892 RHOHQ15669 191 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms