RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 BBC3Q96PG8 261 aaPredicted RBP15.27■□□□□ 0.04
CDC42BPB-201ENST00000361246 NUPR1O60356 82 aa15.27■□□□□ 0.03
CDC42BPB-201ENST00000361246 NPSP0C0P6 89 aa15.27■□□□□ 0.03
CDC42BPB-201ENST00000361246 RETNQ9HD89 108 aa15.27■□□□□ 0.03
CDC42BPB-201ENST00000361246 CDPF1Q6NVV7 123 aa15.26■□□□□ 0.03
CDC42BPB-201ENST00000361246 LINC00467Q9BRT7 94 aa15.26■□□□□ 0.03
CDC42BPB-201ENST00000361246 K7EP13 123 aa15.25■□□□□ 0.03
CDC42BPB-201ENST00000361246 COL5A1P20908 1838 aaPredicted RBP15.25■□□□□ 0.03
CDC42BPB-201ENST00000361246 PRO3102Q9H379 93 aa15.25■□□□□ 0.03
CDC42BPB-201ENST00000361246 ZFAND2AQ8N6M9 145 aa15.25■□□□□ 0.03
CDC42BPB-201ENST00000361246 LINC01006Q8NI28 216 aa15.25■□□□□ 0.03
CDC42BPB-201ENST00000361246 LOC100131303A0A0U1RQF7 123 aa15.24■□□□□ 0.03
CDC42BPB-201ENST00000361246 ANKRD39Q53RE8 183 aa15.24■□□□□ 0.03
CDC42BPB-201ENST00000361246 XAGE1AQ9HD64 81 aa15.24■□□□□ 0.03
CDC42BPB-201ENST00000361246 TRBV10-1A0A0K0K1A3 114 aa15.24■□□□□ 0.03
CDC42BPB-201ENST00000361246 C11orf86A6NJI1 115 aa15.24■□□□□ 0.03
CDC42BPB-201ENST00000361246 EXPH5Q8NEV8 1989 aa15.24■□□□□ 0.03
CDC42BPB-201ENST00000361246 C20orf144Q9BQM9 153 aa15.23■□□□□ 0.03
CDC42BPB-201ENST00000361246 CLUHP3Q96NS8 147 aa15.23■□□□□ 0.03
CDC42BPB-201ENST00000361246 ZNF702PQ9H963 129 aa15.23■□□□□ 0.03
CDC42BPB-201ENST00000361246 A0A1B0GX51 115 aa15.22■□□□□ 0.03
CDC42BPB-201ENST00000361246 COX7BP24311 80 aa15.22■□□□□ 0.03
CDC42BPB-201ENST00000361246 SPINK6Q6UWN8 80 aa15.22■□□□□ 0.03
CDC42BPB-201ENST00000361246 C9orf85Q96MD7 179 aa15.22■□□□□ 0.03
CDC42BPB-201ENST00000361246 IGKV2-28A0A075B6P5 120 aa15.21■□□□□ 0.03
CDC42BPB-201ENST00000361246 IGKV2D-28P01615 120 aa15.21■□□□□ 0.03
CDC42BPB-201ENST00000361246 PRRC2AP48634 2157 aaKnown RBP15.21■□□□□ 0.02
CDC42BPB-201ENST00000361246 C11orf71Q6IPW1 123 aa15.21■□□□□ 0.02
CDC42BPB-201ENST00000361246 LYRM9A8MSI8 78 aa15.2■□□□□ 0.02
CDC42BPB-201ENST00000361246 SIVA1O15304 175 aa15.2■□□□□ 0.02
CDC42BPB-201ENST00000361246 Q8N976 141 aa15.2■□□□□ 0.02
CDC42BPB-201ENST00000361246 C7orf33Q8WU49 177 aa15.2■□□□□ 0.02
CDC42BPB-201ENST00000361246 UBE2D4Q9Y2X8 147 aa15.2■□□□□ 0.02
CDC42BPB-201ENST00000361246 LGALS9O00182 355 aa15.19■□□□□ 0.02
CDC42BPB-201ENST00000361246 TRAV10A0A0B4J240 114 aa15.19■□□□□ 0.02
CDC42BPB-201ENST00000361246 TDRG1Q3Y452 100 aa15.18■□□□□ 0.02
CDC42BPB-201ENST00000361246 SLPIP03973 132 aa15.18■□□□□ 0.02
CDC42BPB-201ENST00000361246 IL15RAQ13261 267 aa15.18■□□□□ 0.02
CDC42BPB-201ENST00000361246 ACYP1P07311 99 aa15.17■□□□□ 0.02
CDC42BPB-201ENST00000361246 KPRPQ5T749 579 aaPredicted RBP15.17■□□□□ 0.02
CDC42BPB-201ENST00000361246 SCXQ7RTU7 201 aa15.17■□□□□ 0.02
CDC42BPB-201ENST00000361246 RPL37AP8A6NKH3 93 aa15.17■□□□□ 0.02
CDC42BPB-201ENST00000361246 CXCL5P42830 114 aa15.17■□□□□ 0.02
CDC42BPB-201ENST00000361246 EP400Q96L91 3159 aa15.17■□□□□ 0.02
CDC42BPB-201ENST00000361246 BRI3O95415 125 aa15.16■□□□□ 0.02
CDC42BPB-201ENST00000361246 NEXN-AS1Q8NBZ9 246 aa15.16■□□□□ 0.02
CDC42BPB-201ENST00000361246 K7EQG2 157 aa15.15■□□□□ 0.02
CDC42BPB-201ENST00000361246 EDN2P20800 178 aa15.15■□□□□ 0.02
CDC42BPB-201ENST00000361246 IGHV1-58A0A0C4DH39 117 aa15.15■□□□□ 0.02
CDC42BPB-201ENST00000361246 MP68P56378 58 aa15.15■□□□□ 0.02
CDC42BPB-201ENST00000361246 IGLV9-49A0A0B4J1Y8 123 aa15.14■□□□□ 0.01
CDC42BPB-201ENST00000361246 H0YGX0 51 aa15.14■□□□□ 0.01
CDC42BPB-201ENST00000361246 HCFC1P51610 2035 aa15.14■□□□□ 0.01
CDC42BPB-201ENST00000361246 LINC00322Q6ZN03 302 aaPredicted RBP15.14■□□□□ 0.01
CDC42BPB-201ENST00000361246 MIFP14174 115 aa15.14■□□□□ 0.01
CDC42BPB-201ENST00000361246 FXYD2P54710 66 aa15.14■□□□□ 0.01
CDC42BPB-201ENST00000361246 C10orf91Q5T1B1 145 aa15.13■□□□□ 0.01
CDC42BPB-201ENST00000361246 CFAP126Q5VTH2 177 aa15.13■□□□□ 0.01
CDC42BPB-201ENST00000361246 CTRLP40313 264 aa15.13■□□□□ 0.01
CDC42BPB-201ENST00000361246 PSMB8P28062 276 aa15.12■□□□□ 0.01
CDC42BPB-201ENST00000361246 MRPL52Q86TS9 123 aaKnown RBP15.12■□□□□ 0.01
CDC42BPB-201ENST00000361246 UBE2D3P61077 147 aa15.11■□□□□ 0.01
CDC42BPB-201ENST00000361246 CASC2Q6XLA1 102 aa15.11■□□□□ 0.01
CDC42BPB-201ENST00000361246 C20orf203Q8NBC4 194 aa15.11■□□□□ 0.01
CDC42BPB-201ENST00000361246 SMIM9A6NGZ8 99 aa15.11■□□□□ 0.01
CDC42BPB-201ENST00000361246 GOLGB1Q14789 3259 aaKnown RBP15.11■□□□□ 0.01
CDC42BPB-201ENST00000361246 Q6ZSR3 168 aa15.11■□□□□ 0.01
CDC42BPB-201ENST00000361246 WFDC10BQ8IUB3 73 aa15.11■□□□□ 0.01
CDC42BPB-201ENST00000361246 TRBV10-2A0A0K0K1G8 114 aa15.1■□□□□ 0.01
CDC42BPB-201ENST00000361246 CUL9Q8IWT3 2517 aa15.1■□□□□ 0.01
CDC42BPB-201ENST00000361246 CSPG4Q6UVK1 2322 aa15.1■□□□□ 0.01
CDC42BPB-201ENST00000361246 PIK3CD-AS1Q5SR53 167 aa15.1■□□□□ 0.01
CDC42BPB-201ENST00000361246 IGHV4-30-4P0DP06 118 aa15.09■□□□□ 0.01
CDC42BPB-201ENST00000361246 SORL1Q92673 2214 aa15.09■□□□□ 0.01
CDC42BPB-201ENST00000361246 TET2Q6N021 2002 aaPredicted RBP15.09■□□□□ 0.01
CDC42BPB-201ENST00000361246 MED14OSP0DP75 135 aa15.09■□□□□ 0.01
CDC42BPB-201ENST00000361246 SPG11Q96JI7 2443 aa15.09■□□□□ 0.01
CDC42BPB-201ENST00000361246 AVPP01185 164 aa15.09■□□□□ 0.01
CDC42BPB-201ENST00000361246 SEC61GP60059 68 aa15.08■□□□□ 0
CDC42BPB-201ENST00000361246 UFSP1Q6NVU6 142 aa15.08■□□□□ 0
CDC42BPB-201ENST00000361246 TRBV6-8A0A0A6YYG3 113 aa15.07■□□□□ 0
CDC42BPB-201ENST00000361246 IGLV2-8P01709 118 aa15.07■□□□□ 0
CDC42BPB-201ENST00000361246 A8MZ25 164 aa15.07■□□□□ 0
CDC42BPB-201ENST00000361246 HIVEP3Q5T1R4 2406 aa15.07■□□□□ 0
CDC42BPB-201ENST00000361246 A0A0B4J2C4 111 aa15.07■□□□□ 0
CDC42BPB-201ENST00000361246 E9PLD3 99 aa15.06■□□□□ 0
CDC42BPB-201ENST00000361246 PSMG3-AS1Q96PY0 264 aa15.06■□□□□ 0
CDC42BPB-201ENST00000361246 SONP18583 2426 aaKnown RBP15.06■□□□□ 0
CDC42BPB-201ENST00000361246 PLXNB1O43157 2135 aa15.06■□□□□ 0
CDC42BPB-201ENST00000361246 TMEM256-PLSCR3K7ERE1 68 aa15.05■□□□□ -0
CDC42BPB-201ENST00000361246 LINC01545Q5VT33 79 aa15.05■□□□□ -0
CDC42BPB-201ENST00000361246 CDKN2A-AS1Q9UH64 79 aa15.05■□□□□ -0
CDC42BPB-201ENST00000361246 BRWD1-AS2P59051 145 aa15.04■□□□□ -0
CDC42BPB-201ENST00000361246 Q6ZPA2 131 aa15.04■□□□□ -0
CDC42BPB-201ENST00000361246 ODF1Q14990 250 aa15.04■□□□□ -0
CDC42BPB-201ENST00000361246 LY6LH3BQJ8 138 aa15.04■□□□□ -0
CDC42BPB-201ENST00000361246 LINC01620Q4KN68 170 aa15.03■□□□□ -0
CDC42BPB-201ENST00000361246 SYCNQ0VAF6 134 aa15.03■□□□□ -0
CDC42BPB-201ENST00000361246 WFDC2Q14508 124 aa15.02■□□□□ -0
CDC42BPB-201ENST00000361246 IGLV2-11P01706 119 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms