RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 IGHV3-30-5P0DP03 117 aa16.57■□□□□ 0.24
POLR2J2-202ENST00000358438 NDUFV3P56181 108 aaKnown RBP16.57■□□□□ 0.24
POLR2J2-202ENST00000358438 GAGE4Q13068 117 aa16.57■□□□□ 0.24
POLR2J2-202ENST00000358438 CITED2Q99967 270 aaPredicted RBP16.57■□□□□ 0.24
POLR2J2-202ENST00000358438 A0A1W2PRX2 142 aa16.57■□□□□ 0.24
POLR2J2-202ENST00000358438 SLC25A20O43772 301 aa16.57■□□□□ 0.24
POLR2J2-202ENST00000358438 SLC25A29Q8N8R3 303 aa16.57■□□□□ 0.24
POLR2J2-202ENST00000358438 RAX2Q96IS3 184 aa16.57■□□□□ 0.24
POLR2J2-202ENST00000358438 K7EQG2 157 aa16.56■□□□□ 0.24
POLR2J2-202ENST00000358438 H3BVH4 76 aa16.55■□□□□ 0.24
POLR2J2-202ENST00000358438 SNRPD3P62318 126 aaKnown RBP16.55■□□□□ 0.24
POLR2J2-202ENST00000358438 TEP1Q99973 2627 aaKnown RBP16.54■□□□□ 0.24
POLR2J2-202ENST00000358438 P0DMU3 169 aa16.54■□□□□ 0.24
POLR2J2-202ENST00000358438 FAM231AP0DMU4 169 aa16.54■□□□□ 0.24
POLR2J2-202ENST00000358438 FAM231CP0DMU5 169 aa16.54■□□□□ 0.24
POLR2J2-202ENST00000358438 KIR2DL4Q99706 377 aa16.54■□□□□ 0.24
POLR2J2-202ENST00000358438 DPH3P1Q9H4G8 78 aa16.54■□□□□ 0.24
POLR2J2-202ENST00000358438 SFTA2Q6UW10 78 aa16.54■□□□□ 0.24
POLR2J2-202ENST00000358438 IFITM1P13164 125 aa16.53■□□□□ 0.24
POLR2J2-202ENST00000358438 RPL32P62910 135 aaKnown RBP16.53■□□□□ 0.24
POLR2J2-202ENST00000358438 TRBV7-9A0A0J9YWB2 115 aa16.52■□□□□ 0.24
POLR2J2-202ENST00000358438 CCL24O00175 119 aa16.52■□□□□ 0.24
POLR2J2-202ENST00000358438 PROK1P58294 105 aa16.52■□□□□ 0.24
POLR2J2-202ENST00000358438 TTC32Q5I0X7 151 aa16.52■□□□□ 0.24
POLR2J2-202ENST00000358438 ZFAND2AQ8N6M9 145 aa16.52■□□□□ 0.24
POLR2J2-202ENST00000358438 FAM19A4Q96LR4 140 aa16.52■□□□□ 0.24
POLR2J2-202ENST00000358438 MED14OSP0DP75 135 aa16.52■□□□□ 0.23
POLR2J2-202ENST00000358438 PRR9Q5T870 116 aa16.52■□□□□ 0.23
POLR2J2-202ENST00000358438 FN1P02751 2386 aaKnown RBP16.52■□□□□ 0.23
POLR2J2-202ENST00000358438 IGLV4-69A0A075B6H9 119 aa16.5■□□□□ 0.23
POLR2J2-202ENST00000358438 C11orf86A6NJI1 115 aa16.5■□□□□ 0.23
POLR2J2-202ENST00000358438 RPL13AP40429 203 aaKnown RBP16.5■□□□□ 0.23
POLR2J2-202ENST00000358438 MRPL23Q16540 153 aaKnown RBP16.5■□□□□ 0.23
POLR2J2-202ENST00000358438 A0A0B4J2C4 111 aa16.5■□□□□ 0.23
POLR2J2-202ENST00000358438 CRYGDP07320 174 aa16.49■□□□□ 0.23
POLR2J2-202ENST00000358438 TMEM141Q96I45 108 aa16.49■□□□□ 0.23
POLR2J2-202ENST00000358438 C9JAW5 83 aa16.49■□□□□ 0.23
POLR2J2-202ENST00000358438 J3KRW8 73 aa16.49■□□□□ 0.23
POLR2J2-202ENST00000358438 Q6ZQT7 251 aa16.49■□□□□ 0.23
POLR2J2-202ENST00000358438 PMVKQ15126 192 aa16.48■□□□□ 0.23
POLR2J2-202ENST00000358438 TMEM61Q8N0U2 210 aa16.48■□□□□ 0.23
POLR2J2-202ENST00000358438 POM121L12Q8N7R1 296 aa16.48■□□□□ 0.23
POLR2J2-202ENST00000358438 DYNLRB2Q8TF09 96 aa16.48■□□□□ 0.23
POLR2J2-202ENST00000358438 APRG1Q8IVJ8 170 aa16.47■□□□□ 0.23
POLR2J2-202ENST00000358438 A0A0J9YX75 114 aa16.47■□□□□ 0.23
POLR2J2-202ENST00000358438 CRLF1O75462 422 aa16.47■□□□□ 0.23
POLR2J2-202ENST00000358438 IGHV3-33P01772 117 aa16.46■□□□□ 0.23
POLR2J2-202ENST00000358438 ATXN8Q156A1 80 aa16.46■□□□□ 0.23
POLR2J2-202ENST00000358438 TRAV2A0A0B4J234 112 aa16.46■□□□□ 0.22
POLR2J2-202ENST00000358438 DEFB114Q30KQ6 69 aa16.46■□□□□ 0.22
POLR2J2-202ENST00000358438 NIPBLQ6KC79 2804 aaeCLIP16.45■□□□□ 0.22
POLR2J2-202ENST00000358438 TRAV4A0A0B4J268 109 aa16.45■□□□□ 0.22
POLR2J2-202ENST00000358438 TRAV21A0A0B4J279 112 aa16.45■□□□□ 0.22
POLR2J2-202ENST00000358438 Q8N1Y9 231 aa16.45■□□□□ 0.22
POLR2J2-202ENST00000358438 RPL39LQ96EH5 51 aaKnown RBP16.45■□□□□ 0.22
POLR2J2-202ENST00000358438 TIMM17AQ99595 171 aa16.45■□□□□ 0.22
POLR2J2-202ENST00000358438 WNK1Q9H4A3 2382 aa16.45■□□□□ 0.22
POLR2J2-202ENST00000358438 IGIPA6NJ69 53 aa16.44■□□□□ 0.22
POLR2J2-202ENST00000358438 RNASE4P34096 147 aaKnown RBP16.44■□□□□ 0.22
POLR2J2-202ENST00000358438 TMEM263Q8WUH6 116 aaKnown RBP16.44■□□□□ 0.22
POLR2J2-202ENST00000358438 ADARB2-AS1A8MUL3 147 aa16.44■□□□□ 0.22
POLR2J2-202ENST00000358438 AMELXQ99217 191 aa16.44■□□□□ 0.22
POLR2J2-202ENST00000358438 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.43■□□□□ 0.22
POLR2J2-202ENST00000358438 TRAV8-4A0A0B4J246 113 aa16.43■□□□□ 0.22
POLR2J2-202ENST00000358438 KLLNB2CW77 178 aa16.43■□□□□ 0.22
POLR2J2-202ENST00000358438 SORL1Q92673 2214 aa16.43■□□□□ 0.22
POLR2J2-202ENST00000358438 CCDC179H3BU77 68 aa16.42■□□□□ 0.22
POLR2J2-202ENST00000358438 DUSP14O95147 198 aaKnown RBP16.42■□□□□ 0.22
POLR2J2-202ENST00000358438 ODF3Q96PU9 254 aa16.42■□□□□ 0.22
POLR2J2-202ENST00000358438 TSHBP01222 138 aa16.42■□□□□ 0.22
POLR2J2-202ENST00000358438 LINC01620Q4KN68 170 aa16.42■□□□□ 0.22
POLR2J2-202ENST00000358438 J3QQQ9 107 aa16.41■□□□□ 0.22
POLR2J2-202ENST00000358438 LGALS3P17931 250 aaKnown RBP16.41■□□□□ 0.22
POLR2J2-202ENST00000358438 NTN5Q8WTR8 489 aaPredicted RBP16.41■□□□□ 0.22
POLR2J2-202ENST00000358438 C2CD3Q4AC94 2353 aa16.41■□□□□ 0.22
POLR2J2-202ENST00000358438 TRBV10-2A0A0K0K1G8 114 aa16.41■□□□□ 0.22
POLR2J2-202ENST00000358438 NSUN5P1Q3KNT7 163 aa16.41■□□□□ 0.22
POLR2J2-202ENST00000358438 A4D1N5 150 aa16.4■□□□□ 0.22
POLR2J2-202ENST00000358438 TSPEAR-AS2P59090 65 aa16.4■□□□□ 0.22
POLR2J2-202ENST00000358438 KRTAP10-3P60369 221 aa16.4■□□□□ 0.22
POLR2J2-202ENST00000358438 PHLDA3Q9Y5J5 127 aa16.4■□□□□ 0.22
POLR2J2-202ENST00000358438 IGKV3-20P01619 116 aa16.39■□□□□ 0.21
POLR2J2-202ENST00000358438 DEFB131AP59861 70 aa16.39■□□□□ 0.21
POLR2J2-202ENST00000358438 HERV-K104P63124 156 aa16.39■□□□□ 0.21
POLR2J2-202ENST00000358438 ZNF876PQ49A33 203 aa16.39■□□□□ 0.21
POLR2J2-202ENST00000358438 C14orf178Q8N769 122 aaPredicted RBP16.39■□□□□ 0.21
POLR2J2-202ENST00000358438 MDFICQ9P1T7 246 aa16.39■□□□□ 0.21
POLR2J2-202ENST00000358438 TP53TG1Q9Y2A0 90 aa16.39■□□□□ 0.21
POLR2J2-202ENST00000358438 S100A4P26447 101 aaKnown RBP16.39■□□□□ 0.21
POLR2J2-202ENST00000358438 TRBV30A0A0K0K1B3 111 aa16.38■□□□□ 0.21
POLR2J2-202ENST00000358438 LEPROTO15243 131 aa16.38■□□□□ 0.21
POLR2J2-202ENST00000358438 SHISA2Q6UWI4 295 aa16.38■□□□□ 0.21
POLR2J2-202ENST00000358438 TRPT1Q86TN4 253 aaKnown RBP16.38■□□□□ 0.21
POLR2J2-202ENST00000358438 TRAV25A0A0B4J276 109 aa16.38■□□□□ 0.21
POLR2J2-202ENST00000358438 NXPH4O95158 308 aa16.38■□□□□ 0.21
POLR2J2-202ENST00000358438 MGPP08493 103 aa16.38■□□□□ 0.21
POLR2J2-202ENST00000358438 ANXA2RQ3ZCQ2 193 aa16.38■□□□□ 0.21
POLR2J2-202ENST00000358438 C15orf53Q8NAA6 179 aa16.38■□□□□ 0.21
POLR2J2-202ENST00000358438 FAM240AA0A1B0GVK7 77 aa16.37■□□□□ 0.21
POLR2J2-202ENST00000358438 TMEM170BQ5T4T1 132 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms