RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 TMEM258P61165 79 aa8.95□□□□□ -0.98
COL9A1-202ENST00000357250 ATOX1O00244 68 aa8.95□□□□□ -0.98
COL9A1-202ENST00000357250 SPRY2O43597 315 aa8.95□□□□□ -0.98
COL9A1-202ENST00000357250 MBD6Q96DN6 1003 aa8.95□□□□□ -0.98
COL9A1-202ENST00000357250 CCDC140Q96MF4 163 aa8.94□□□□□ -0.98
COL9A1-202ENST00000357250 PRO0255Q9UI72 69 aa8.94□□□□□ -0.98
COL9A1-202ENST00000357250 TMEM61Q8N0U2 210 aa8.94□□□□□ -0.98
COL9A1-202ENST00000357250 ZNF295-AS1Q8N0V1 137 aa8.94□□□□□ -0.98
COL9A1-202ENST00000357250 TM2D2Q9BX73 214 aa8.94□□□□□ -0.98
COL9A1-202ENST00000357250 CRYGBP07316 175 aa8.93□□□□□ -0.98
COL9A1-202ENST00000357250 UNQ9165/PRO28630Q6UXU0 137 aa8.93□□□□□ -0.98
COL9A1-202ENST00000357250 SMIM20Q8N5G0 67 aa8.93□□□□□ -0.98
COL9A1-202ENST00000357250 hADV29S1A0JD25 119 aa8.93□□□□□ -0.98
COL9A1-202ENST00000357250 CFAP54Q96N23 3096 aa8.93□□□□□ -0.98
COL9A1-202ENST00000357250 WDFY4Q6ZS81 3184 aa8.93□□□□□ -0.98
COL9A1-202ENST00000357250 C19orf84I3L1E1 186 aa8.92□□□□□ -0.98
COL9A1-202ENST00000357250 C1orf229Q6ZS94 237 aaPredicted RBP8.92□□□□□ -0.98
COL9A1-202ENST00000357250 FOXI1Q12951 378 aa8.92□□□□□ -0.98
COL9A1-202ENST00000357250 H7C423 109 aa8.91□□□□□ -0.98
COL9A1-202ENST00000357250 MAP6D1Q9H9H5 199 aa8.91□□□□□ -0.98
COL9A1-202ENST00000357250 SMIM9A6NGZ8 99 aa8.91□□□□□ -0.98
COL9A1-202ENST00000357250 IGHV3-30-3P0DP02 117 aa8.91□□□□□ -0.98
COL9A1-202ENST00000357250 PKD1L2Q7Z442 2459 aa8.91□□□□□ -0.98
COL9A1-202ENST00000357250 K7EQG2 157 aa8.9□□□□□ -0.98
COL9A1-202ENST00000357250 SPAG11BQ08648 103 aa8.9□□□□□ -0.98
COL9A1-202ENST00000357250 Q9HAA7 133 aa8.9□□□□□ -0.98
COL9A1-202ENST00000357250 TRANK1O15050 2925 aa8.9□□□□□ -0.98
COL9A1-202ENST00000357250 MIAQ16674 131 aa8.9□□□□□ -0.98
COL9A1-202ENST00000357250 FRMD6-AS1P0C7T7 363 aa8.9□□□□□ -0.98
COL9A1-202ENST00000357250 WFDC2Q14508 124 aa8.9□□□□□ -0.98
COL9A1-202ENST00000357250 ACANP16112 2415 aa8.9□□□□□ -0.98
COL9A1-202ENST00000357250 LY6LH3BQJ8 138 aa8.9□□□□□ -0.99
COL9A1-202ENST00000357250 TMEM256-PLSCR3K7ERE1 68 aa8.9□□□□□ -0.99
COL9A1-202ENST00000357250 ZNF80P51504 273 aaPredicted RBP8.9□□□□□ -0.99
COL9A1-202ENST00000357250 TIRAPP58753 221 aa8.9□□□□□ -0.99
COL9A1-202ENST00000357250 RPL18AQ02543 176 aaKnown RBP8.9□□□□□ -0.99
COL9A1-202ENST00000357250 NDUFA11Q86Y39 141 aa8.89□□□□□ -0.99
COL9A1-202ENST00000357250 DIRC1Q969H9 104 aa8.89□□□□□ -0.99
COL9A1-202ENST00000357250 NDUFB1O75438 58 aa8.89□□□□□ -0.99
COL9A1-202ENST00000357250 TTTY13Q9BZ97 58 aa8.89□□□□□ -0.99
COL9A1-202ENST00000357250 IGLV10-54A0A075B6I4 117 aa8.89□□□□□ -0.99
COL9A1-202ENST00000357250 TRBV12-3P01733 135 aa8.88□□□□□ -0.99
COL9A1-202ENST00000357250 CDSNQ15517 529 aa8.88□□□□□ -0.99
COL9A1-202ENST00000357250 NREPQ16612 68 aa8.88□□□□□ -0.99
COL9A1-202ENST00000357250 LINC00322Q6ZN03 302 aaPredicted RBP8.88□□□□□ -0.99
COL9A1-202ENST00000357250 RBM3P98179 157 aaKnown RBP8.88□□□□□ -0.99
COL9A1-202ENST00000357250 MIR7-3HGQ8N6C7 128 aa8.88□□□□□ -0.99
COL9A1-202ENST00000357250 SZT2Q5T011 3432 aa8.88□□□□□ -0.99
COL9A1-202ENST00000357250 LECT2O14960 151 aa8.87□□□□□ -0.99
COL9A1-202ENST00000357250 CITED2Q99967 270 aaPredicted RBP8.87□□□□□ -0.99
COL9A1-202ENST00000357250 EML5Q05BV3 1969 aa8.87□□□□□ -0.99
COL9A1-202ENST00000357250 A0A0J9YXY3 114 aa8.87□□□□□ -0.99
COL9A1-202ENST00000357250 IGHV3-30P01768 117 aa8.87□□□□□ -0.99
COL9A1-202ENST00000357250 IGHV3-33P01772 117 aa8.87□□□□□ -0.99
COL9A1-202ENST00000357250 IGHV3-30-5P0DP03 117 aa8.87□□□□□ -0.99
COL9A1-202ENST00000357250 Q6YL49 198 aa8.87□□□□□ -0.99
COL9A1-202ENST00000357250 PRORYQ9H606 182 aa8.87□□□□□ -0.99
COL9A1-202ENST00000357250 SMAD5-AS1Q9Y6J3 95 aa8.87□□□□□ -0.99
COL9A1-202ENST00000357250 BPTFQ12830 3046 aa8.87□□□□□ -0.99
COL9A1-202ENST00000357250 HCFC1P51610 2035 aa8.87□□□□□ -0.99
COL9A1-202ENST00000357250 LYRM9A8MSI8 78 aa8.86□□□□□ -0.99
COL9A1-202ENST00000357250 MP68P56378 58 aa8.86□□□□□ -0.99
COL9A1-202ENST00000357250 ZFAND3Q9H8U3 227 aa8.86□□□□□ -0.99
COL9A1-202ENST00000357250 PSMB8P28062 276 aa8.86□□□□□ -0.99
COL9A1-202ENST00000357250 UFSP1Q6NVU6 142 aa8.86□□□□□ -0.99
COL9A1-202ENST00000357250 NEXN-AS1Q8NBZ9 246 aa8.86□□□□□ -0.99
COL9A1-202ENST00000357250 DEFB105AQ8NG35 78 aa8.86□□□□□ -0.99
COL9A1-202ENST00000357250 SPANXB1Q9NS25 103 aaPredicted RBP8.86□□□□□ -0.99
COL9A1-202ENST00000357250 U3KQK5 164 aa8.86□□□□□ -0.99
COL9A1-202ENST00000357250 G3V4G9 280 aa8.86□□□□□ -0.99
COL9A1-202ENST00000357250 GDF5OSQ5U4N7 250 aa8.86□□□□□ -0.99
COL9A1-202ENST00000357250 DNAJC9-AS1A6NH13 148 aa8.85□□□□□ -0.99
COL9A1-202ENST00000357250 HIST2H2BDQ6DRA6 164 aa8.85□□□□□ -0.99
COL9A1-202ENST00000357250 LINC00643Q86TS7 51 aa8.85□□□□□ -0.99
COL9A1-202ENST00000357250 B5MCH6 92 aa8.85□□□□□ -0.99
COL9A1-202ENST00000357250 YPEL4Q96NS1 127 aa8.85□□□□□ -0.99
COL9A1-202ENST00000357250 DEFB135Q30KP9 77 aa8.85□□□□□ -0.99
COL9A1-202ENST00000357250 Q6ZUT4 128 aa8.85□□□□□ -0.99
COL9A1-202ENST00000357250 DEFB1P60022 68 aa8.85□□□□□ -0.99
COL9A1-202ENST00000357250 RNASE8Q8TDE3 154 aaKnown RBP8.85□□□□□ -0.99
COL9A1-202ENST00000357250 TRBV6-5A0A0K0K1A5 114 aa8.84□□□□□ -0.99
COL9A1-202ENST00000357250 A0A1B0GX51 115 aa8.84□□□□□ -0.99
COL9A1-202ENST00000357250 DAND5Q8N907 189 aa8.84□□□□□ -0.99
COL9A1-202ENST00000357250 KLK12Q9UKR0 248 aa8.84□□□□□ -0.99
COL9A1-202ENST00000357250 DEFB114Q30KQ6 69 aa8.84□□□□□ -1
COL9A1-202ENST00000357250 C11orf71Q6IPW1 123 aa8.84□□□□□ -1
COL9A1-202ENST00000357250 ZFAND2AQ8N6M9 145 aa8.84□□□□□ -1
COL9A1-202ENST00000357250 FAM236AA0A1B0GUQ0 79 aa8.83□□□□□ -1
COL9A1-202ENST00000357250 FAM236BA0A1B0GV22 79 aa8.83□□□□□ -1
COL9A1-202ENST00000357250 HIGD2BQ4VC39 106 aa8.83□□□□□ -1
COL9A1-202ENST00000357250 C14orf177Q52M58 125 aa8.83□□□□□ -1
COL9A1-202ENST00000357250 NFE4Q86UQ8 179 aa8.83□□□□□ -1
COL9A1-202ENST00000357250 IL17DQ8TAD2 202 aa8.83□□□□□ -1
COL9A1-202ENST00000357250 LINC01548A6NM66 108 aa8.83□□□□□ -1
COL9A1-202ENST00000357250 F8W735 103 aaPredicted RBP8.83□□□□□ -1
COL9A1-202ENST00000357250 FLNBO75369 2602 aaKnown RBP8.83□□□□□ -1
COL9A1-202ENST00000357250 PYGO1Q9Y3Y4 419 aa8.83□□□□□ -1
COL9A1-202ENST00000357250 KLK5Q9Y337 293 aaPredicted RBP8.82□□□□□ -1
COL9A1-202ENST00000357250 MRAPQ8TCY5 172 aa8.82□□□□□ -1
COL9A1-202ENST00000357250 COX7BP24311 80 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms