RNA–Protein interactions for RNA: ENST00000355422.10

GFRA1-201, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GFRA1, Length 2,583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-201ENST00000355422 TRBV30A0A0K0K1B3 111 aa10.6□□□□□ -0.71
GFRA1-201ENST00000355422 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.59□□□□□ -0.71
GFRA1-201ENST00000355422 IGKV2-29A2NJV5 120 aaPredicted RBP10.59□□□□□ -0.71
GFRA1-201ENST00000355422 Q5PR19 223 aa10.59□□□□□ -0.71
GFRA1-201ENST00000355422 Q6ZSV7 163 aa10.59□□□□□ -0.71
GFRA1-201ENST00000355422 DUX3Q96PT4 197 aa10.59□□□□□ -0.71
GFRA1-201ENST00000355422 CHCHD7Q9BUK0 85 aa10.59□□□□□ -0.71
GFRA1-201ENST00000355422 CELSR2Q9HCU4 2923 aa10.59□□□□□ -0.71
GFRA1-201ENST00000355422 ITPR1Q14643 2758 aa10.59□□□□□ -0.71
GFRA1-201ENST00000355422 VSIG2Q96IQ7 327 aa10.59□□□□□ -0.71
GFRA1-201ENST00000355422 TEX49A0A1B0GTD5 131 aa10.58□□□□□ -0.72
GFRA1-201ENST00000355422 RBMY1BA6NDE4 496 aaKnown RBP10.58□□□□□ -0.72
GFRA1-201ENST00000355422 RBMY1EA6NEQ0 496 aaKnown RBP10.58□□□□□ -0.72
GFRA1-201ENST00000355422 RBMY1DP0C7P1 496 aaKnown RBP10.58□□□□□ -0.72
GFRA1-201ENST00000355422 RNF183Q96D59 192 aa10.58□□□□□ -0.72
GFRA1-201ENST00000355422 UBE2D4Q9Y2X8 147 aa10.58□□□□□ -0.72
GFRA1-201ENST00000355422 PRRC2AP48634 2157 aaKnown RBP10.58□□□□□ -0.72
GFRA1-201ENST00000355422 TINCRA0A1B0GVN0 87 aa10.58□□□□□ -0.72
GFRA1-201ENST00000355422 SPANXDQ9BXN6 97 aa10.58□□□□□ -0.72
GFRA1-201ENST00000355422 SPANXCQ9NY87 97 aa10.58□□□□□ -0.72
GFRA1-201ENST00000355422 IGHV3-38A0A0C4DH36 116 aa10.57□□□□□ -0.72
GFRA1-201ENST00000355422 TRBV10-2A0A0K0K1G8 114 aa10.57□□□□□ -0.72
GFRA1-201ENST00000355422 GATA3P23771 443 aa10.57□□□□□ -0.72
GFRA1-201ENST00000355422 DEFB136Q30KP8 78 aa10.57□□□□□ -0.72
GFRA1-201ENST00000355422 ZFAND6Q6FIF0 208 aa10.57□□□□□ -0.72
GFRA1-201ENST00000355422 MAPK1IP1LQ8NDC0 245 aa10.57□□□□□ -0.72
GFRA1-201ENST00000355422 ICOSQ9Y6W8 199 aa10.57□□□□□ -0.72
GFRA1-201ENST00000355422 H3BMM0 161 aa10.57□□□□□ -0.72
GFRA1-201ENST00000355422 SLURP1P55000 103 aa10.57□□□□□ -0.72
GFRA1-201ENST00000355422 C18orf65Q6ZTR6 163 aa10.57□□□□□ -0.72
GFRA1-201ENST00000355422 TEX29Q8N6K0 151 aa10.57□□□□□ -0.72
GFRA1-201ENST00000355422 CITED1Q99966 193 aa10.57□□□□□ -0.72
GFRA1-201ENST00000355422 MIAQ16674 131 aa10.56□□□□□ -0.72
GFRA1-201ENST00000355422 UBE2E2Q96LR5 201 aa10.56□□□□□ -0.72
GFRA1-201ENST00000355422 LINC00467Q9BRT7 94 aa10.56□□□□□ -0.72
GFRA1-201ENST00000355422 SPANXA1Q9NS26 97 aa10.56□□□□□ -0.72
GFRA1-201ENST00000355422 LINC01356Q8N9X3 169 aa10.55□□□□□ -0.72
GFRA1-201ENST00000355422 ANAPC13Q9BS18 74 aa10.55□□□□□ -0.72
GFRA1-201ENST00000355422 ZNF702PQ9H963 129 aa10.55□□□□□ -0.72
GFRA1-201ENST00000355422 CREBBPQ92793 2442 aa10.54□□□□□ -0.72
GFRA1-201ENST00000355422 CRLF1O75462 422 aa10.54□□□□□ -0.72
GFRA1-201ENST00000355422 ZNF415Q09FC8 603 aa10.54□□□□□ -0.72
GFRA1-201ENST00000355422 DAND5Q8N907 189 aa10.54□□□□□ -0.72
GFRA1-201ENST00000355422 PIEZO1Q92508 2521 aa10.54□□□□□ -0.72
GFRA1-201ENST00000355422 RPL13AP40429 203 aaKnown RBP10.54□□□□□ -0.72
GFRA1-201ENST00000355422 C2orf82Q6UX34 121 aa10.54□□□□□ -0.72
GFRA1-201ENST00000355422 CLEC2BQ92478 149 aa10.54□□□□□ -0.72
GFRA1-201ENST00000355422 LINC01600Q96MT4 127 aa10.54□□□□□ -0.72
GFRA1-201ENST00000355422 VPREB3Q9UKI3 123 aa10.54□□□□□ -0.72
GFRA1-201ENST00000355422 CSMD2Q7Z408 3487 aa10.53□□□□□ -0.72
GFRA1-201ENST00000355422 NACAE9PAV3 2078 aa10.53□□□□□ -0.72
GFRA1-201ENST00000355422 TRAV4A0A0B4J268 109 aa10.53□□□□□ -0.72
GFRA1-201ENST00000355422 H7C423 109 aa10.53□□□□□ -0.72
GFRA1-201ENST00000355422 CDKN2A-AS1Q9UH64 79 aa10.53□□□□□ -0.72
GFRA1-201ENST00000355422 A8MTW9 85 aa10.53□□□□□ -0.72
GFRA1-201ENST00000355422 SNCGO76070 127 aa10.53□□□□□ -0.72
GFRA1-201ENST00000355422 UBE2WQ96B02 151 aa10.53□□□□□ -0.72
GFRA1-201ENST00000355422 LINC01587Q99440 93 aa10.53□□□□□ -0.72
GFRA1-201ENST00000355422 TRAV8-4A0A0B4J246 113 aa10.52□□□□□ -0.73
GFRA1-201ENST00000355422 COX6CP09669 75 aa10.52□□□□□ -0.73
GFRA1-201ENST00000355422 TMEM61Q8N0U2 210 aa10.52□□□□□ -0.73
GFRA1-201ENST00000355422 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.52□□□□□ -0.73
GFRA1-201ENST00000355422 GAGE2BQ13066 116 aa10.51□□□□□ -0.73
GFRA1-201ENST00000355422 GAGE2EQ4V326 116 aa10.51□□□□□ -0.73
GFRA1-201ENST00000355422 C11orf72Q8NBR9 251 aa10.51□□□□□ -0.73
GFRA1-201ENST00000355422 GAGE2DQ9UEU5 116 aa10.51□□□□□ -0.73
GFRA1-201ENST00000355422 IGHV3-53P01767 116 aa10.51□□□□□ -0.73
GFRA1-201ENST00000355422 DSCR9P59020 149 aa10.51□□□□□ -0.73
GFRA1-201ENST00000355422 PIK3CD-AS1Q5SR53 167 aa10.51□□□□□ -0.73
GFRA1-201ENST00000355422 TMEM101Q96IK0 257 aa10.5□□□□□ -0.73
GFRA1-201ENST00000355422 YAE1D1Q9NRH1 226 aa10.5□□□□□ -0.73
GFRA1-201ENST00000355422 COX6A2Q02221 97 aa10.5□□□□□ -0.73
GFRA1-201ENST00000355422 Q6YL49 198 aa10.49□□□□□ -0.73
GFRA1-201ENST00000355422 A0A096LNT2 108 aa10.49□□□□□ -0.73
GFRA1-201ENST00000355422 LST1O00453 97 aa10.49□□□□□ -0.73
GFRA1-201ENST00000355422 NHLRC4P0CG21 123 aaPredicted RBP10.49□□□□□ -0.73
GFRA1-201ENST00000355422 HIST2H2BDQ6DRA6 164 aa10.49□□□□□ -0.73
GFRA1-201ENST00000355422 DGAT2L7PQ6IED9 249 aa10.49□□□□□ -0.73
GFRA1-201ENST00000355422 DNAJC30Q96LL9 226 aa10.49□□□□□ -0.73
GFRA1-201ENST00000355422 MAP6D1Q9H9H5 199 aa10.49□□□□□ -0.73
GFRA1-201ENST00000355422 H3BT86 120 aa10.48□□□□□ -0.73
GFRA1-201ENST00000355422 TIMM17BO60830 172 aa10.48□□□□□ -0.73
GFRA1-201ENST00000355422 IFITM1P13164 125 aa10.48□□□□□ -0.73
GFRA1-201ENST00000355422 C15orf53Q8NAA6 179 aa10.48□□□□□ -0.73
GFRA1-201ENST00000355422 J3QLI3 93 aa10.48□□□□□ -0.73
GFRA1-201ENST00000355422 NDUFA1O15239 70 aa10.48□□□□□ -0.73
GFRA1-201ENST00000355422 TIRAPP58753 221 aa10.48□□□□□ -0.73
GFRA1-201ENST00000355422 A0A0U1RRA0 63 aa10.47□□□□□ -0.73
GFRA1-201ENST00000355422 RS1O15537 224 aa10.47□□□□□ -0.73
GFRA1-201ENST00000355422 BEAN1Q3B7T3 259 aa10.47□□□□□ -0.73
GFRA1-201ENST00000355422 ZNF625Q96I27 306 aaPredicted RBP10.47□□□□□ -0.73
GFRA1-201ENST00000355422 CITED2Q99967 270 aaPredicted RBP10.47□□□□□ -0.73
GFRA1-201ENST00000355422 IGHV3OR16-12A0A075B7B8 117 aa10.47□□□□□ -0.73
GFRA1-201ENST00000355422 IGLV5-45A0A087WSX0 123 aa10.47□□□□□ -0.73
GFRA1-201ENST00000355422 NDUFV3P56181 108 aaKnown RBP10.46□□□□□ -0.73
GFRA1-201ENST00000355422 Q9H8V8 135 aa10.46□□□□□ -0.73
GFRA1-201ENST00000355422 PEMTQ9UBM1 199 aa10.46□□□□□ -0.74
GFRA1-201ENST00000355422 NDUFA7O95182 113 aa10.45□□□□□ -0.74
GFRA1-201ENST00000355422 INSP01308 110 aa10.45□□□□□ -0.74
GFRA1-201ENST00000355422 CIRBPQ14011 172 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms