RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 C14orf177Q52M58 125 aa9.93□□□□□ -0.82
SCN8A-202ENST00000355133 TMEM256-PLSCR3K7ERE1 68 aa9.93□□□□□ -0.82
SCN8A-202ENST00000355133 ZNF843Q8N446 348 aa9.93□□□□□ -0.82
SCN8A-202ENST00000355133 LYRM9A8MSI8 78 aa9.93□□□□□ -0.82
SCN8A-202ENST00000355133 TAX1BP3O14907 124 aa9.92□□□□□ -0.82
SCN8A-202ENST00000355133 IGLV2-8P01709 118 aa9.92□□□□□ -0.82
SCN8A-202ENST00000355133 MIAQ16674 131 aa9.92□□□□□ -0.82
SCN8A-202ENST00000355133 UFSP1Q6NVU6 142 aa9.92□□□□□ -0.82
SCN8A-202ENST00000355133 ODF3Q96PU9 254 aa9.92□□□□□ -0.82
SCN8A-202ENST00000355133 SPATA25Q9BR10 227 aa9.91□□□□□ -0.82
SCN8A-202ENST00000355133 SPG11Q96JI7 2443 aa9.91□□□□□ -0.82
SCN8A-202ENST00000355133 ATOX1O00244 68 aa9.91□□□□□ -0.82
SCN8A-202ENST00000355133 TNRC6AQ8NDV7 1962 aaKnown RBP9.91□□□□□ -0.82
SCN8A-202ENST00000355133 A0A0J9YXY3 114 aa9.9□□□□□ -0.82
SCN8A-202ENST00000355133 A0A1B0GXF2 115 aa9.9□□□□□ -0.82
SCN8A-202ENST00000355133 SMIM9A6NGZ8 99 aa9.9□□□□□ -0.82
SCN8A-202ENST00000355133 FOXI1Q12951 378 aa9.9□□□□□ -0.82
SCN8A-202ENST00000355133 PTH2Q96A98 100 aa9.9□□□□□ -0.82
SCN8A-202ENST00000355133 LY6G6DO95868 133 aa9.9□□□□□ -0.82
SCN8A-202ENST00000355133 GDF5OSQ5U4N7 250 aa9.9□□□□□ -0.82
SCN8A-202ENST00000355133 NEXN-AS1Q8NBZ9 246 aa9.9□□□□□ -0.82
SCN8A-202ENST00000355133 DENND4AQ7Z401 1863 aa9.9□□□□□ -0.82
SCN8A-202ENST00000355133 A0A087WZ39 114 aa9.9□□□□□ -0.83
SCN8A-202ENST00000355133 IGLC6P0CF74 106 aa9.9□□□□□ -0.83
SCN8A-202ENST00000355133 OTOGLQ3ZCN5 2332 aa9.89□□□□□ -0.83
SCN8A-202ENST00000355133 FAM19A1Q7Z5A9 133 aa9.89□□□□□ -0.83
SCN8A-202ENST00000355133 ACACBO00763 2458 aa9.89□□□□□ -0.83
SCN8A-202ENST00000355133 FREM1Q5H8C1 2179 aa9.89□□□□□ -0.83
SCN8A-202ENST00000355133 CRYGBP07316 175 aa9.89□□□□□ -0.83
SCN8A-202ENST00000355133 TMEM131Q92545 1883 aa9.89□□□□□ -0.83
SCN8A-202ENST00000355133 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.88□□□□□ -0.83
SCN8A-202ENST00000355133 LY6LH3BQJ8 138 aa9.88□□□□□ -0.83
SCN8A-202ENST00000355133 H3BT86 120 aa9.88□□□□□ -0.83
SCN8A-202ENST00000355133 CDKN2A-AS1Q9UH64 79 aa9.88□□□□□ -0.83
SCN8A-202ENST00000355133 CUL9Q8IWT3 2517 aa9.88□□□□□ -0.83
SCN8A-202ENST00000355133 PROK1P58294 105 aa9.88□□□□□ -0.83
SCN8A-202ENST00000355133 C11orf71Q6IPW1 123 aa9.88□□□□□ -0.83
SCN8A-202ENST00000355133 SHISA2Q6UWI4 295 aa9.88□□□□□ -0.83
SCN8A-202ENST00000355133 OBSL1O75147 1896 aa9.88□□□□□ -0.83
SCN8A-202ENST00000355133 CFAP126Q5VTH2 177 aa9.88□□□□□ -0.83
SCN8A-202ENST00000355133 CRIP3Q6Q6R5 217 aa9.87□□□□□ -0.83
SCN8A-202ENST00000355133 ZNF295-AS1Q8N0V1 137 aa9.87□□□□□ -0.83
SCN8A-202ENST00000355133 ZFAND3Q9H8U3 227 aa9.87□□□□□ -0.83
SCN8A-202ENST00000355133 SPANXCQ9NY87 97 aa9.87□□□□□ -0.83
SCN8A-202ENST00000355133 ARHGAP21Q5T5U3 1957 aa9.87□□□□□ -0.83
SCN8A-202ENST00000355133 ATRXP46100 2492 aa9.87□□□□□ -0.83
SCN8A-202ENST00000355133 TCL1BO95988 128 aa9.87□□□□□ -0.83
SCN8A-202ENST00000355133 FAM19A5Q7Z5A7 132 aaPredicted RBP9.87□□□□□ -0.83
SCN8A-202ENST00000355133 IGKV4-1P06312 121 aa9.86□□□□□ -0.83
SCN8A-202ENST00000355133 CSPG4Q6UVK1 2322 aa9.86□□□□□ -0.83
SCN8A-202ENST00000355133 EIF4EBP1Q13541 118 aaPredicted RBP9.86□□□□□ -0.83
SCN8A-202ENST00000355133 EBI3Q14213 229 aa9.85□□□□□ -0.83
SCN8A-202ENST00000355133 MLST8Q9BVC4 326 aa9.85□□□□□ -0.83
SCN8A-202ENST00000355133 XAGE1AQ9HD64 81 aa9.85□□□□□ -0.83
SCN8A-202ENST00000355133 ZNF106Q9H2Y7 1883 aaKnown RBP9.85□□□□□ -0.83
SCN8A-202ENST00000355133 WNK1Q9H4A3 2382 aa9.85□□□□□ -0.83
SCN8A-202ENST00000355133 IGLV4-3A0A075B6K6 122 aa9.85□□□□□ -0.83
SCN8A-202ENST00000355133 MIFP14174 115 aa9.85□□□□□ -0.83
SCN8A-202ENST00000355133 C18orf65Q6ZTR6 163 aa9.85□□□□□ -0.83
SCN8A-202ENST00000355133 SLPIP03973 132 aa9.84□□□□□ -0.83
SCN8A-202ENST00000355133 Q8N976 141 aa9.84□□□□□ -0.83
SCN8A-202ENST00000355133 ZNF702PQ9H963 129 aa9.84□□□□□ -0.83
SCN8A-202ENST00000355133 TRBV6-8A0A0A6YYG3 113 aa9.84□□□□□ -0.83
SCN8A-202ENST00000355133 BBC3Q96PG8 261 aaPredicted RBP9.84□□□□□ -0.83
SCN8A-202ENST00000355133 FSTL3O95633 263 aa9.84□□□□□ -0.83
SCN8A-202ENST00000355133 IGLV2-18A0A075B6J9 118 aa9.84□□□□□ -0.83
SCN8A-202ENST00000355133 H7C423 109 aa9.83□□□□□ -0.84
SCN8A-202ENST00000355133 BPY2O14599 106 aa9.83□□□□□ -0.84
SCN8A-202ENST00000355133 WFDC10AQ9H1F0 79 aa9.83□□□□□ -0.84
SCN8A-202ENST00000355133 CRIP1P50238 77 aa9.83□□□□□ -0.84
SCN8A-202ENST00000355133 PRO3102Q9H379 93 aa9.83□□□□□ -0.84
SCN8A-202ENST00000355133 NCOA6Q14686 2063 aaPredicted RBP9.83□□□□□ -0.84
SCN8A-202ENST00000355133 ANKHD1Q8IWZ3 2542 aaKnown RBP9.83□□□□□ -0.84
SCN8A-202ENST00000355133 ZNF22P17026 224 aaPredicted RBP9.83□□□□□ -0.84
SCN8A-202ENST00000355133 PDE6GP18545 87 aa9.83□□□□□ -0.84
SCN8A-202ENST00000355133 SPATA12Q7Z6I5 190 aa9.83□□□□□ -0.84
SCN8A-202ENST00000355133 M0QY20 66 aa9.83□□□□□ -0.84
SCN8A-202ENST00000355133 PIK3CD-AS1Q5SR53 167 aa9.83□□□□□ -0.84
SCN8A-202ENST00000355133 RNASE8Q8TDE3 154 aaKnown RBP9.83□□□□□ -0.84
SCN8A-202ENST00000355133 TMEM223A0PJW6 202 aa9.83□□□□□ -0.84
SCN8A-202ENST00000355133 PTPN13Q12923 2485 aa9.82□□□□□ -0.84
SCN8A-202ENST00000355133 M0R2N4 97 aa9.82□□□□□ -0.84
SCN8A-202ENST00000355133 DSCAML1Q8TD84 2053 aa9.82□□□□□ -0.84
SCN8A-202ENST00000355133 DCANP1Q8TF63 244 aa9.82□□□□□ -0.84
SCN8A-202ENST00000355133 TRAV23DV6A0A075B6W5 121 aa9.82□□□□□ -0.84
SCN8A-202ENST00000355133 UPK3BQ9BT76 320 aa9.82□□□□□ -0.84
SCN8A-202ENST00000355133 PSMG3-AS1Q96PY0 264 aa9.81□□□□□ -0.84
SCN8A-202ENST00000355133 LTBP2Q14767 1821 aa9.81□□□□□ -0.84
SCN8A-202ENST00000355133 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.81□□□□□ -0.84
SCN8A-202ENST00000355133 LINC01006Q8NI28 216 aa9.81□□□□□ -0.84
SCN8A-202ENST00000355133 SCXQ7RTU7 201 aa9.81□□□□□ -0.84
SCN8A-202ENST00000355133 TRBV6-4A0A1B0GX49 114 aa9.81□□□□□ -0.84
SCN8A-202ENST00000355133 Q6ZS46 218 aa9.8□□□□□ -0.84
SCN8A-202ENST00000355133 SMIM20Q8N5G0 67 aa9.8□□□□□ -0.84
SCN8A-202ENST00000355133 TP73-AS1Q9UF72 201 aa9.8□□□□□ -0.84
SCN8A-202ENST00000355133 SONP18583 2426 aaKnown RBP9.8□□□□□ -0.84
SCN8A-202ENST00000355133 TRAV10A0A0B4J240 114 aa9.8□□□□□ -0.84
SCN8A-202ENST00000355133 LINC00526Q96FQ7 95 aa9.8□□□□□ -0.84
SCN8A-202ENST00000355133 SEC61GP60059 68 aa9.8□□□□□ -0.84
SCN8A-202ENST00000355133 PRM2P04554 102 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms