RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 GAGE13Q4V321 117 aa14.53□□□□□ -0.08
TRIM4-202ENST00000354241 CYSLTR1Q9Y271 337 aa14.53□□□□□ -0.08
TRIM4-202ENST00000354241 C20orf202A1L168 122 aa14.52□□□□□ -0.09
TRIM4-202ENST00000354241 ATP5LO75964 103 aa14.52□□□□□ -0.09
TRIM4-202ENST00000354241 SCGB3A1Q96QR1 104 aa14.52□□□□□ -0.09
TRIM4-202ENST00000354241 SBSPONQ8IVN8 264 aa14.51□□□□□ -0.09
TRIM4-202ENST00000354241 LOC100131303A0A0U1RQF7 123 aa14.51□□□□□ -0.09
TRIM4-202ENST00000354241 RPL39P62891 51 aaKnown RBP14.51□□□□□ -0.09
TRIM4-202ENST00000354241 PRADC1Q9BSG0 188 aa14.51□□□□□ -0.09
TRIM4-202ENST00000354241 ATOH7Q8N100 152 aa14.5□□□□□ -0.09
TRIM4-202ENST00000354241 HHLA3Q9XRX5 114 aa14.5□□□□□ -0.09
TRIM4-202ENST00000354241 NOTCH1P46531 2555 aa14.5□□□□□ -0.09
TRIM4-202ENST00000354241 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.49□□□□□ -0.09
TRIM4-202ENST00000354241 PRSS1P07477 247 aa14.49□□□□□ -0.09
TRIM4-202ENST00000354241 COTL1Q14019 142 aa14.49□□□□□ -0.09
TRIM4-202ENST00000354241 TEX43Q6ZNM6 134 aa14.49□□□□□ -0.09
TRIM4-202ENST00000354241 PMCHL2Q9BQD1 86 aa14.49□□□□□ -0.09
TRIM4-202ENST00000354241 UBE2D3P61077 147 aa14.49□□□□□ -0.09
TRIM4-202ENST00000354241 UBE2D2P62837 147 aa14.49□□□□□ -0.09
TRIM4-202ENST00000354241 LINC01545Q5VT33 79 aa14.48□□□□□ -0.09
TRIM4-202ENST00000354241 Q6ZN92 141 aa14.47□□□□□ -0.09
TRIM4-202ENST00000354241 ERASQ7Z444 233 aa14.47□□□□□ -0.09
TRIM4-202ENST00000354241 C20orf203Q8NBC4 194 aa14.47□□□□□ -0.09
TRIM4-202ENST00000354241 MRAPQ8TCY5 172 aa14.47□□□□□ -0.09
TRIM4-202ENST00000354241 C2orf88Q9BSF0 95 aa14.47□□□□□ -0.09
TRIM4-202ENST00000354241 TEX48A0A1B0GUV7 120 aa14.47□□□□□ -0.09
TRIM4-202ENST00000354241 LINC01549A6NIU2 74 aa14.47□□□□□ -0.09
TRIM4-202ENST00000354241 DAZ4Q86SG3 579 aaKnown RBP14.47□□□□□ -0.09
TRIM4-202ENST00000354241 DAZ3Q9NR90 486 aaKnown RBP14.47□□□□□ -0.09
TRIM4-202ENST00000354241 ATP5G1P05496 136 aa14.46□□□□□ -0.09
TRIM4-202ENST00000354241 CRYBA4P53673 196 aa14.46□□□□□ -0.09
TRIM4-202ENST00000354241 PRO0255Q9UI72 69 aa14.46□□□□□ -0.09
TRIM4-202ENST00000354241 LGALS9CQ6DKI2 356 aa14.45□□□□□ -0.1
TRIM4-202ENST00000354241 VAMP8Q9BV40 100 aa14.45□□□□□ -0.1
TRIM4-202ENST00000354241 CHCHD7Q9BUK0 85 aa14.45□□□□□ -0.1
TRIM4-202ENST00000354241 MGAM2Q2M2H8 2515 aa14.44□□□□□ -0.1
TRIM4-202ENST00000354241 SPATA25Q9BR10 227 aa14.44□□□□□ -0.1
TRIM4-202ENST00000354241 C11orf68Q9H3H3 251 aaKnown RBP14.44□□□□□ -0.1
TRIM4-202ENST00000354241 HTN3P15516 51 aa14.43□□□□□ -0.1
TRIM4-202ENST00000354241 PAM16Q9Y3D7 125 aa14.43□□□□□ -0.1
TRIM4-202ENST00000354241 IGIPA6NJ69 53 aa14.43□□□□□ -0.1
TRIM4-202ENST00000354241 GYPEP15421 78 aa14.43□□□□□ -0.1
TRIM4-202ENST00000354241 ZMAT4Q9H898 229 aa14.43□□□□□ -0.1
TRIM4-202ENST00000354241 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.42□□□□□ -0.1
TRIM4-202ENST00000354241 A0A0J9YWU9 116 aa14.42□□□□□ -0.1
TRIM4-202ENST00000354241 IGKV2-29A2NJV5 120 aaPredicted RBP14.42□□□□□ -0.1
TRIM4-202ENST00000354241 F5H768 121 aa14.42□□□□□ -0.1
TRIM4-202ENST00000354241 PAX4O43316 350 aa14.42□□□□□ -0.1
TRIM4-202ENST00000354241 BAALCQ8WXS3 180 aa14.42□□□□□ -0.1
TRIM4-202ENST00000354241 TMEM141Q96I45 108 aa14.42□□□□□ -0.1
TRIM4-202ENST00000354241 TIMM17AQ99595 171 aa14.42□□□□□ -0.1
TRIM4-202ENST00000354241 ODF1Q14990 250 aa14.41□□□□□ -0.1
TRIM4-202ENST00000354241 C12orf74Q32Q52 190 aa14.41□□□□□ -0.1
TRIM4-202ENST00000354241 MAJINQ3KP22 176 aa14.41□□□□□ -0.1
TRIM4-202ENST00000354241 TM2D3Q9BRN9 247 aa14.41□□□□□ -0.1
TRIM4-202ENST00000354241 NBEAL1Q6ZS30 2694 aa14.41□□□□□ -0.1
TRIM4-202ENST00000354241 A0A0J9YY99 117 aa14.41□□□□□ -0.1
TRIM4-202ENST00000354241 LINC00694P0DN24 101 aa14.41□□□□□ -0.1
TRIM4-202ENST00000354241 NTM-AS1Q6ZSK4 140 aa14.4□□□□□ -0.1
TRIM4-202ENST00000354241 A0A1B0GV90 55 aa14.39□□□□□ -0.11
TRIM4-202ENST00000354241 TRAV9-2A0A087WT02 112 aa14.39□□□□□ -0.11
TRIM4-202ENST00000354241 A0A087WX48 190 aa14.39□□□□□ -0.11
TRIM4-202ENST00000354241 TRAV12-1A0A0B4J245 112 aa14.39□□□□□ -0.11
TRIM4-202ENST00000354241 SPATA45Q537H7 98 aa14.39□□□□□ -0.11
TRIM4-202ENST00000354241 OPRPNQ99935 248 aaPredicted RBP14.39□□□□□ -0.11
TRIM4-202ENST00000354241 VSIG2Q96IQ7 327 aa14.38□□□□□ -0.11
TRIM4-202ENST00000354241 TRAV26-1A0A087WT03 109 aa14.37□□□□□ -0.11
TRIM4-202ENST00000354241 hDV102S1A0JD36 115 aa14.37□□□□□ -0.11
TRIM4-202ENST00000354241 MRPL52Q86TS9 123 aaKnown RBP14.37□□□□□ -0.11
TRIM4-202ENST00000354241 GTSF1LQ9H1H1 148 aa14.37□□□□□ -0.11
TRIM4-202ENST00000354241 MRPL35Q9NZE8 188 aaKnown RBP14.37□□□□□ -0.11
TRIM4-202ENST00000354241 ZC2HC1BQ5TFG8 222 aa14.37□□□□□ -0.11
TRIM4-202ENST00000354241 CEMP1Q6PRD7 247 aaPredicted RBP14.37□□□□□ -0.11
TRIM4-202ENST00000354241 ATP6V0E2Q8NHE4 81 aa14.37□□□□□ -0.11
TRIM4-202ENST00000354241 CHTOPQ9Y3Y2 248 aaKnown RBP14.37□□□□□ -0.11
TRIM4-202ENST00000354241 PRSS29PA6NIE9 313 aa14.36□□□□□ -0.11
TRIM4-202ENST00000354241 UBE2D4Q9Y2X8 147 aa14.36□□□□□ -0.11
TRIM4-202ENST00000354241 PYGO1Q9Y3Y4 419 aa14.36□□□□□ -0.11
TRIM4-202ENST00000354241 IGLV4-3A0A075B6K6 122 aa14.35□□□□□ -0.11
TRIM4-202ENST00000354241 HSBP1L1C9JCN9 74 aa14.35□□□□□ -0.11
TRIM4-202ENST00000354241 PMVKQ15126 192 aa14.35□□□□□ -0.11
TRIM4-202ENST00000354241 A0A096LPF7 62 aa14.35□□□□□ -0.11
TRIM4-202ENST00000354241 DPM2O94777 84 aa14.35□□□□□ -0.11
TRIM4-202ENST00000354241 IGKCP01834 107 aa14.35□□□□□ -0.11
TRIM4-202ENST00000354241 Q6ZTC4 211 aa14.35□□□□□ -0.11
TRIM4-202ENST00000354241 SPANXA1Q9NS26 97 aa14.35□□□□□ -0.11
TRIM4-202ENST00000354241 TRBV25-1A0A075B6N4 114 aa14.34□□□□□ -0.11
TRIM4-202ENST00000354241 C11orf45Q8TAV5 145 aa14.34□□□□□ -0.11
TRIM4-202ENST00000354241 TMEM243Q9BU79 118 aa14.34□□□□□ -0.11
TRIM4-202ENST00000354241 F8VRH5 84 aa14.33□□□□□ -0.11
TRIM4-202ENST00000354241 CST9LQ9H4G1 147 aa14.33□□□□□ -0.11
TRIM4-202ENST00000354241 M0R143 59 aa14.33□□□□□ -0.12
TRIM4-202ENST00000354241 NANOS2P60321 138 aaKnown RBP14.33□□□□□ -0.12
TRIM4-202ENST00000354241 KRTAP21-3Q3LHN1 58 aa14.33□□□□□ -0.12
TRIM4-202ENST00000354241 TRBV6-8A0A0A6YYG3 113 aa14.32□□□□□ -0.12
TRIM4-202ENST00000354241 UBE2L6O14933 153 aa14.32□□□□□ -0.12
TRIM4-202ENST00000354241 TMEM97Q5BJF2 176 aa14.32□□□□□ -0.12
TRIM4-202ENST00000354241 EREGO14944 169 aa14.31□□□□□ -0.12
TRIM4-202ENST00000354241 PAPPA-AS1Q5QFB9 102 aa14.31□□□□□ -0.12
TRIM4-202ENST00000354241 MIEN1Q9BRT3 115 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms