RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 DAZ4Q86SG3 579 aaKnown RBP11.26□□□□□ -0.61
PTBP1-201ENST00000349038 MRPL53Q96EL3 112 aaKnown RBP11.26□□□□□ -0.61
PTBP1-201ENST00000349038 DAZ1Q9NQZ3 744 aaKnown RBP11.26□□□□□ -0.61
PTBP1-201ENST00000349038 DAZ3Q9NR90 486 aaKnown RBP11.26□□□□□ -0.61
PTBP1-201ENST00000349038 USP9XQ93008 2570 aaPredicted RBP11.26□□□□□ -0.61
PTBP1-201ENST00000349038 CENPEQ02224 2701 aa11.26□□□□□ -0.61
PTBP1-201ENST00000349038 IGKV3OR2-268A0A0C4DH90 116 aa11.26□□□□□ -0.61
PTBP1-201ENST00000349038 POLR2KP53803 58 aaKnown RBP11.26□□□□□ -0.61
PTBP1-201ENST00000349038 SPINK13Q1W4C9 94 aa11.26□□□□□ -0.61
PTBP1-201ENST00000349038 C3orf22Q8N5N4 141 aa11.26□□□□□ -0.61
PTBP1-201ENST00000349038 TRBV30A0A0K0K1B3 111 aa11.25□□□□□ -0.61
PTBP1-201ENST00000349038 SMIM9A6NGZ8 99 aa11.25□□□□□ -0.61
PTBP1-201ENST00000349038 POM121L12Q8N7R1 296 aa11.25□□□□□ -0.61
PTBP1-201ENST00000349038 RNF152Q8N8N0 203 aa11.25□□□□□ -0.61
PTBP1-201ENST00000349038 FAM110DQ8TAY7 271 aaPredicted RBP11.25□□□□□ -0.61
PTBP1-201ENST00000349038 PPP1R17O96001 155 aa11.25□□□□□ -0.61
PTBP1-201ENST00000349038 IGHV3-16A0A0C4DH30 117 aa11.24□□□□□ -0.61
PTBP1-201ENST00000349038 DGAT2L7PQ6IED9 249 aa11.24□□□□□ -0.61
PTBP1-201ENST00000349038 HIST1H4AP62805 103 aaKnown RBP11.24□□□□□ -0.61
PTBP1-201ENST00000349038 BRD3OSQ6XYD6 125 aa11.24□□□□□ -0.61
PTBP1-201ENST00000349038 C9orf139Q6ZV77 190 aa11.24□□□□□ -0.61
PTBP1-201ENST00000349038 TIMM17AQ99595 171 aa11.24□□□□□ -0.61
PTBP1-201ENST00000349038 CYSTM1Q9H1C7 97 aa11.24□□□□□ -0.61
PTBP1-201ENST00000349038 IGHV1-69DA0A0B4J2H0 117 aa11.23□□□□□ -0.61
PTBP1-201ENST00000349038 RNASE1P07998 156 aaKnown RBP11.23□□□□□ -0.61
PTBP1-201ENST00000349038 HRCT1Q6UXD1 115 aa11.23□□□□□ -0.61
PTBP1-201ENST00000349038 NRGNQ92686 78 aa11.23□□□□□ -0.61
PTBP1-201ENST00000349038 IGLV4-3A0A075B6K6 122 aa11.23□□□□□ -0.61
PTBP1-201ENST00000349038 BAALC-AS2P0C853 105 aa11.23□□□□□ -0.61
PTBP1-201ENST00000349038 MINOS1Q5TGZ0 78 aa11.23□□□□□ -0.61
PTBP1-201ENST00000349038 MINOS1-NBL1R4GNA1 71 aa11.23□□□□□ -0.61
PTBP1-201ENST00000349038 RHPN1-AS1Q9BWJ2 59 aa11.22□□□□□ -0.61
PTBP1-201ENST00000349038 A0A1B0GX51 115 aa11.22□□□□□ -0.61
PTBP1-201ENST00000349038 POLQO75417 2590 aa11.22□□□□□ -0.61
PTBP1-201ENST00000349038 TINCRA0A1B0GVN0 87 aa11.22□□□□□ -0.61
PTBP1-201ENST00000349038 H3BT86 120 aa11.22□□□□□ -0.61
PTBP1-201ENST00000349038 LST1O00453 97 aa11.22□□□□□ -0.61
PTBP1-201ENST00000349038 SAA4P35542 130 aa11.22□□□□□ -0.61
PTBP1-201ENST00000349038 DNAJC30Q96LL9 226 aa11.22□□□□□ -0.61
PTBP1-201ENST00000349038 J3KT08 172 aa11.21□□□□□ -0.61
PTBP1-201ENST00000349038 LINC00315P59091 139 aa11.21□□□□□ -0.61
PTBP1-201ENST00000349038 C5orf47Q569G3 176 aa11.21□□□□□ -0.61
PTBP1-201ENST00000349038 Q8N2B8 174 aa11.21□□□□□ -0.61
PTBP1-201ENST00000349038 U3KQE9 123 aa11.21□□□□□ -0.62
PTBP1-201ENST00000349038 ZFP36P26651 326 aaKnown RBP11.2□□□□□ -0.62
PTBP1-201ENST00000349038 C4orf26Q17RF5 130 aa11.2□□□□□ -0.62
PTBP1-201ENST00000349038 C20orf203Q8NBC4 194 aa11.2□□□□□ -0.62
PTBP1-201ENST00000349038 CHD8Q9HCK8 2581 aa11.2□□□□□ -0.62
PTBP1-201ENST00000349038 UQCRQO14949 82 aa11.2□□□□□ -0.62
PTBP1-201ENST00000349038 Q9H8V8 135 aa11.19□□□□□ -0.62
PTBP1-201ENST00000349038 OVOL1O14753 267 aa11.19□□□□□ -0.62
PTBP1-201ENST00000349038 TMEM61Q8N0U2 210 aa11.19□□□□□ -0.62
PTBP1-201ENST00000349038 PIK3CD-AS1Q5SR53 167 aa11.18□□□□□ -0.62
PTBP1-201ENST00000349038 WFDC9Q8NEX5 89 aa11.18□□□□□ -0.62
PTBP1-201ENST00000349038 C14orf132Q9NPU4 83 aa11.18□□□□□ -0.62
PTBP1-201ENST00000349038 CDKN2A-AS1Q9UH64 79 aa11.18□□□□□ -0.62
PTBP1-201ENST00000349038 CIRBPQ14011 172 aaKnown RBP11.18□□□□□ -0.62
PTBP1-201ENST00000349038 TOMM7Q9P0U1 55 aa11.18□□□□□ -0.62
PTBP1-201ENST00000349038 LENEPQ9Y5L5 61 aa11.18□□□□□ -0.62
PTBP1-201ENST00000349038 KMT2BQ9UMN6 2715 aaPredicted RBP11.18□□□□□ -0.62
PTBP1-201ENST00000349038 ATP5G1P05496 136 aa11.17□□□□□ -0.62
PTBP1-201ENST00000349038 TIRAPP58753 221 aa11.17□□□□□ -0.62
PTBP1-201ENST00000349038 ITLN2Q8WWU7 325 aaPredicted RBP11.17□□□□□ -0.62
PTBP1-201ENST00000349038 KIF25-AS1Q9Y6Z4 181 aa11.17□□□□□ -0.62
PTBP1-201ENST00000349038 M0QY20 66 aa11.17□□□□□ -0.62
PTBP1-201ENST00000349038 TRACP01848 142 aa11.17□□□□□ -0.62
PTBP1-201ENST00000349038 PRB1P04280 392 aa11.17□□□□□ -0.62
PTBP1-201ENST00000349038 MIAQ16674 131 aa11.17□□□□□ -0.62
PTBP1-201ENST00000349038 FBXL19-AS1Q494R0 122 aa11.17□□□□□ -0.62
PTBP1-201ENST00000349038 C10orf105Q8TEF2 133 aa11.17□□□□□ -0.62
PTBP1-201ENST00000349038 HRNRQ86YZ3 2850 aaPredicted RBP11.16□□□□□ -0.62
PTBP1-201ENST00000349038 DNAL4O96015 105 aa11.16□□□□□ -0.62
PTBP1-201ENST00000349038 SIRPDQ9H106 197 aa11.16□□□□□ -0.62
PTBP1-201ENST00000349038 PEMTQ9UBM1 199 aa11.16□□□□□ -0.62
PTBP1-201ENST00000349038 IGHV3OR16-12A0A075B7B8 117 aa11.16□□□□□ -0.62
PTBP1-201ENST00000349038 TRBV7-1A0A0A6YYK4 115 aa11.16□□□□□ -0.62
PTBP1-201ENST00000349038 TRBV27A0A0K0K1C4 114 aa11.16□□□□□ -0.62
PTBP1-201ENST00000349038 C11orf71Q6IPW1 123 aa11.16□□□□□ -0.62
PTBP1-201ENST00000349038 OR13C6PQ8NH95 151 aa11.16□□□□□ -0.62
PTBP1-201ENST00000349038 IGHV1-58A0A0C4DH39 117 aa11.15□□□□□ -0.62
PTBP1-201ENST00000349038 LITAFQ99732 161 aa11.15□□□□□ -0.62
PTBP1-201ENST00000349038 CCL21O00585 134 aa11.14□□□□□ -0.63
PTBP1-201ENST00000349038 LINC00643Q86TS7 51 aa11.14□□□□□ -0.63
PTBP1-201ENST00000349038 HIVEP3Q5T1R4 2406 aa11.14□□□□□ -0.63
PTBP1-201ENST00000349038 TRBV7-7A0A0K0K1E9 115 aa11.14□□□□□ -0.63
PTBP1-201ENST00000349038 UCNP55089 124 aa11.14□□□□□ -0.63
PTBP1-201ENST00000349038 PRIMA1Q86XR5 153 aa11.14□□□□□ -0.63
PTBP1-201ENST00000349038 ACACBO00763 2458 aa11.14□□□□□ -0.63
PTBP1-201ENST00000349038 SLPIP03973 132 aa11.14□□□□□ -0.63
PTBP1-201ENST00000349038 USP24Q9UPU5 2620 aa11.13□□□□□ -0.63
PTBP1-201ENST00000349038 MED14OSP0DP75 135 aa11.13□□□□□ -0.63
PTBP1-201ENST00000349038 COX7CP15954 63 aa11.13□□□□□ -0.63
PTBP1-201ENST00000349038 ZFYVE26Q68DK2 2539 aa11.12□□□□□ -0.63
PTBP1-201ENST00000349038 IGHV4OR15-8A0A075B7B6 117 aa11.12□□□□□ -0.63
PTBP1-201ENST00000349038 A0A087WW49 117 aa11.12□□□□□ -0.63
PTBP1-201ENST00000349038 LINC00526Q96FQ7 95 aa11.12□□□□□ -0.63
PTBP1-201ENST00000349038 FAM218AQ96MZ4 157 aa11.12□□□□□ -0.63
PTBP1-201ENST00000349038 C11orf68Q9H3H3 251 aaKnown RBP11.12□□□□□ -0.63
PTBP1-201ENST00000349038 CITED2Q99967 270 aaPredicted RBP11.12□□□□□ -0.63
PTBP1-201ENST00000349038 VSIG2Q96IQ7 327 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms