RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 IGLV4-3A0A075B6K6 122 aa11.01□□□□□ -0.65
NUP50-201ENST00000347635 P0DMU3 169 aa11.01□□□□□ -0.65
NUP50-201ENST00000347635 FAM231AP0DMU4 169 aa11.01□□□□□ -0.65
NUP50-201ENST00000347635 FAM231CP0DMU5 169 aa11.01□□□□□ -0.65
NUP50-201ENST00000347635 TLN1Q9Y490 2541 aaKnown RBP11□□□□□ -0.65
NUP50-201ENST00000347635 TRBV6-5A0A0K0K1A5 114 aa11□□□□□ -0.65
NUP50-201ENST00000347635 K7EQG2 157 aa10.99□□□□□ -0.65
NUP50-201ENST00000347635 ATRXP46100 2492 aa10.99□□□□□ -0.65
NUP50-201ENST00000347635 NXPH4O95158 308 aa10.98□□□□□ -0.65
NUP50-201ENST00000347635 LY6G6DO95868 133 aa10.98□□□□□ -0.65
NUP50-201ENST00000347635 IGLV2-18A0A075B6J9 118 aa10.98□□□□□ -0.65
NUP50-201ENST00000347635 POLR2KP53803 58 aaKnown RBP10.98□□□□□ -0.65
NUP50-201ENST00000347635 RNF183Q96D59 192 aa10.98□□□□□ -0.65
NUP50-201ENST00000347635 NAV2Q8IVL1 2488 aa10.97□□□□□ -0.65
NUP50-201ENST00000347635 KLLNB2CW77 178 aa10.97□□□□□ -0.65
NUP50-201ENST00000347635 INAFM1C9JVW0 142 aa10.97□□□□□ -0.65
NUP50-201ENST00000347635 IGHV3-33P01772 117 aa10.97□□□□□ -0.65
NUP50-201ENST00000347635 Q6ZSV7 163 aa10.97□□□□□ -0.65
NUP50-201ENST00000347635 PCSK5Q92824 1860 aa10.97□□□□□ -0.65
NUP50-201ENST00000347635 HTTP42858 3142 aa10.97□□□□□ -0.65
NUP50-201ENST00000347635 TEX49A0A1B0GTD5 131 aa10.97□□□□□ -0.65
NUP50-201ENST00000347635 SND1-IT1Q9HBX3 110 aa10.97□□□□□ -0.65
NUP50-201ENST00000347635 COX7B2Q8TF08 81 aa10.96□□□□□ -0.65
NUP50-201ENST00000347635 RMI2Q96E14 147 aa10.96□□□□□ -0.65
NUP50-201ENST00000347635 SPART-AS1P0CW21 52 aa10.96□□□□□ -0.66
NUP50-201ENST00000347635 Q6ZS46 218 aa10.96□□□□□ -0.66
NUP50-201ENST00000347635 TSHBP01222 138 aa10.95□□□□□ -0.66
NUP50-201ENST00000347635 HILS1P60008 231 aa10.95□□□□□ -0.66
NUP50-201ENST00000347635 SHISA2Q6UWI4 295 aa10.95□□□□□ -0.66
NUP50-201ENST00000347635 TMEM61Q8N0U2 210 aa10.95□□□□□ -0.66
NUP50-201ENST00000347635 TRBV30A0A0K0K1B3 111 aa10.95□□□□□ -0.66
NUP50-201ENST00000347635 PSCAO43653 123 aa10.95□□□□□ -0.66
NUP50-201ENST00000347635 TRIAP1O43715 76 aa10.95□□□□□ -0.66
NUP50-201ENST00000347635 HIST2H2BCQ6DN03 193 aa10.95□□□□□ -0.66
NUP50-201ENST00000347635 FAM236AA0A1B0GUQ0 79 aa10.94□□□□□ -0.66
NUP50-201ENST00000347635 FAM236BA0A1B0GV22 79 aa10.94□□□□□ -0.66
NUP50-201ENST00000347635 IGIPA6NJ69 53 aa10.94□□□□□ -0.66
NUP50-201ENST00000347635 LINC01546A6NGU7 62 aa10.94□□□□□ -0.66
NUP50-201ENST00000347635 PTPN13Q12923 2485 aa10.94□□□□□ -0.66
NUP50-201ENST00000347635 H0YGX0 51 aa10.94□□□□□ -0.66
NUP50-201ENST00000347635 XCL1P47992 114 aa10.94□□□□□ -0.66
NUP50-201ENST00000347635 LINC00467Q9BRT7 94 aa10.94□□□□□ -0.66
NUP50-201ENST00000347635 MAP6D1Q9H9H5 199 aa10.94□□□□□ -0.66
NUP50-201ENST00000347635 ORMDL1Q9P0S3 153 aa10.94□□□□□ -0.66
NUP50-201ENST00000347635 UBL5Q9BZL1 73 aa10.93□□□□□ -0.66
NUP50-201ENST00000347635 C9orf85Q96MD7 179 aa10.93□□□□□ -0.66
NUP50-201ENST00000347635 NDUFV3P56181 108 aaKnown RBP10.93□□□□□ -0.66
NUP50-201ENST00000347635 C5orf38Q86SI9 138 aa10.93□□□□□ -0.66
NUP50-201ENST00000347635 ZNF702PQ9H963 129 aa10.93□□□□□ -0.66
NUP50-201ENST00000347635 PYGO1Q9Y3Y4 419 aa10.93□□□□□ -0.66
NUP50-201ENST00000347635 CSPG4Q6UVK1 2322 aa10.93□□□□□ -0.66
NUP50-201ENST00000347635 CLPSL2Q6UWE3 100 aa10.92□□□□□ -0.66
NUP50-201ENST00000347635 TRACP01848 142 aa10.92□□□□□ -0.66
NUP50-201ENST00000347635 ATP5G1P05496 136 aa10.92□□□□□ -0.66
NUP50-201ENST00000347635 DOPEY2Q9Y3R5 2298 aa10.92□□□□□ -0.66
NUP50-201ENST00000347635 CRLF1O75462 422 aa10.92□□□□□ -0.66
NUP50-201ENST00000347635 PSMB8P28062 276 aa10.92□□□□□ -0.66
NUP50-201ENST00000347635 IGLV4-69A0A075B6H9 119 aa10.92□□□□□ -0.66
NUP50-201ENST00000347635 PIEZO2Q9H5I5 2752 aa10.91□□□□□ -0.66
NUP50-201ENST00000347635 CDKN2A-AS1Q9UH64 79 aa10.91□□□□□ -0.66
NUP50-201ENST00000347635 TMEM263Q8WUH6 116 aaKnown RBP10.91□□□□□ -0.66
NUP50-201ENST00000347635 A0A096LPF7 62 aa10.91□□□□□ -0.66
NUP50-201ENST00000347635 RS1O15537 224 aa10.91□□□□□ -0.66
NUP50-201ENST00000347635 CRYGDP07320 174 aa10.91□□□□□ -0.66
NUP50-201ENST00000347635 DCANP1Q8TF63 244 aa10.91□□□□□ -0.66
NUP50-201ENST00000347635 COX7A2LO14548 114 aa10.9□□□□□ -0.66
NUP50-201ENST00000347635 IGLV1-40P01703 118 aa10.9□□□□□ -0.66
NUP50-201ENST00000347635 UBE2D1P51668 147 aa10.9□□□□□ -0.66
NUP50-201ENST00000347635 XGP55808 180 aa10.9□□□□□ -0.66
NUP50-201ENST00000347635 PROK1P58294 105 aa10.9□□□□□ -0.66
NUP50-201ENST00000347635 NDUFA7O95182 113 aa10.9□□□□□ -0.66
NUP50-201ENST00000347635 DEFB114Q30KQ6 69 aa10.9□□□□□ -0.66
NUP50-201ENST00000347635 TRBV10-1A0A0K0K1A3 114 aa10.9□□□□□ -0.67
NUP50-201ENST00000347635 A0A1W2PPR1 153 aa10.9□□□□□ -0.67
NUP50-201ENST00000347635 MRPL23Q16540 153 aaKnown RBP10.89□□□□□ -0.67
NUP50-201ENST00000347635 SPANXCQ9NY87 97 aa10.89□□□□□ -0.67
NUP50-201ENST00000347635 SMIM20Q8N5G0 67 aa10.89□□□□□ -0.67
NUP50-201ENST00000347635 C10orf99Q6UWK7 81 aa10.89□□□□□ -0.67
NUP50-201ENST00000347635 ZNF580Q9UK33 172 aa10.89□□□□□ -0.67
NUP50-201ENST00000347635 MIR7-3HGQ8N6C7 128 aa10.89□□□□□ -0.67
NUP50-201ENST00000347635 TRAV4A0A0B4J268 109 aa10.88□□□□□ -0.67
NUP50-201ENST00000347635 NDUFA1O15239 70 aa10.88□□□□□ -0.67
NUP50-201ENST00000347635 ANGP03950 147 aaKnown RBP10.88□□□□□ -0.67
NUP50-201ENST00000347635 KRTAP10-9P60411 292 aa10.88□□□□□ -0.67
NUP50-201ENST00000347635 CHD7Q9P2D1 2997 aa10.87□□□□□ -0.67
NUP50-201ENST00000347635 LINC01006Q8NI28 216 aa10.87□□□□□ -0.67
NUP50-201ENST00000347635 CRIP2P52943 208 aaPredicted RBP10.87□□□□□ -0.67
NUP50-201ENST00000347635 BBC3Q96PG8 261 aaPredicted RBP10.87□□□□□ -0.67
NUP50-201ENST00000347635 TMEM126AQ9H061 195 aa10.87□□□□□ -0.67
NUP50-201ENST00000347635 LINC00308Q8TCZ7 52 aa10.87□□□□□ -0.67
NUP50-201ENST00000347635 NOTCH3Q9UM47 2321 aa10.86□□□□□ -0.67
NUP50-201ENST00000347635 C5orf42Q9H799 3197 aa10.86□□□□□ -0.67
NUP50-201ENST00000347635 TIRAPP58753 221 aa10.86□□□□□ -0.67
NUP50-201ENST00000347635 UBE2D3P61077 147 aa10.86□□□□□ -0.67
NUP50-201ENST00000347635 UBE2D2P62837 147 aa10.86□□□□□ -0.67
NUP50-201ENST00000347635 SMIM9A6NGZ8 99 aa10.86□□□□□ -0.67
NUP50-201ENST00000347635 A8MZ25 164 aa10.86□□□□□ -0.67
NUP50-201ENST00000347635 TSPEAR-AS2P59090 65 aa10.86□□□□□ -0.67
NUP50-201ENST00000347635 ATOX1O00244 68 aa10.86□□□□□ -0.67
NUP50-201ENST00000347635 BRI3O95415 125 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms