RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 MAJINQ3KP22 176 aa5.78□□□□□ -1.48
HMGCR-202ENST00000343975 COL5A1-AS1Q5SY13 56 aa5.78□□□□□ -1.48
HMGCR-202ENST00000343975 RNASEKQ6P5S7 137 aaKnown RBP5.78□□□□□ -1.48
HMGCR-202ENST00000343975 C20orf78Q9BR46 151 aa5.78□□□□□ -1.48
HMGCR-202ENST00000343975 PTTG1IPP53801 180 aa5.78□□□□□ -1.48
HMGCR-202ENST00000343975 FHL2Q14192 279 aa5.78□□□□□ -1.48
HMGCR-202ENST00000343975 RNF151Q2KHN1 245 aa5.78□□□□□ -1.48
HMGCR-202ENST00000343975 Q6ZN92 141 aa5.78□□□□□ -1.48
HMGCR-202ENST00000343975 VPS25Q9BRG1 176 aa5.78□□□□□ -1.48
HMGCR-202ENST00000343975 TRAV26-2A0A0B4J265 109 aa5.78□□□□□ -1.48
HMGCR-202ENST00000343975 H3BNG1 76 aa5.78□□□□□ -1.48
HMGCR-202ENST00000343975 TNFRSF6BO95407 300 aa5.78□□□□□ -1.48
HMGCR-202ENST00000343975 PAPPA-AS1Q5QFB9 102 aa5.78□□□□□ -1.48
HMGCR-202ENST00000343975 TMEM243Q9BU79 118 aa5.78□□□□□ -1.48
HMGCR-202ENST00000343975 EDA2RQ9HAV5 297 aa5.78□□□□□ -1.48
HMGCR-202ENST00000343975 IGHV1-24A0A0C4DH33 117 aa5.77□□□□□ -1.49
HMGCR-202ENST00000343975 PLAC8L1A1L4L8 177 aa5.77□□□□□ -1.49
HMGCR-202ENST00000343975 LINC01549A6NIU2 74 aa5.77□□□□□ -1.49
HMGCR-202ENST00000343975 SMKR1H3BMG3 65 aa5.77□□□□□ -1.49
HMGCR-202ENST00000343975 CRPP02741 224 aa5.77□□□□□ -1.49
HMGCR-202ENST00000343975 ORMDL2Q53FV1 153 aa5.77□□□□□ -1.49
HMGCR-202ENST00000343975 LINC00612Q8N6U2 182 aa5.77□□□□□ -1.49
HMGCR-202ENST00000343975 IGHV3-38A0A0C4DH36 116 aa5.77□□□□□ -1.49
HMGCR-202ENST00000343975 GTSF1LQ9H1H1 148 aa5.77□□□□□ -1.49
HMGCR-202ENST00000343975 AP5S1Q9NUS5 200 aa5.77□□□□□ -1.49
HMGCR-202ENST00000343975 A0A1B0GXF2 115 aa5.76□□□□□ -1.49
HMGCR-202ENST00000343975 CHTOPQ9Y3Y2 248 aaKnown RBP5.76□□□□□ -1.49
HMGCR-202ENST00000343975 GATD1Q8NB37 220 aa5.76□□□□□ -1.49
HMGCR-202ENST00000343975 SMIM2Q9BVW6 85 aa5.76□□□□□ -1.49
HMGCR-202ENST00000343975 M0QY20 66 aa5.75□□□□□ -1.49
HMGCR-202ENST00000343975 CYSLTR1Q9Y271 337 aa5.75□□□□□ -1.49
HMGCR-202ENST00000343975 PRSS47A8MTI9 375 aa5.75□□□□□ -1.49
HMGCR-202ENST00000343975 IFI27P40305 119 aaPredicted RBP5.75□□□□□ -1.49
HMGCR-202ENST00000343975 NEXN-AS1Q8NBZ9 246 aa5.75□□□□□ -1.49
HMGCR-202ENST00000343975 TTC32Q5I0X7 151 aa5.75□□□□□ -1.49
HMGCR-202ENST00000343975 OR5A1Q8NGJ0 315 aa5.75□□□□□ -1.49
HMGCR-202ENST00000343975 RMI2Q96E14 147 aa5.75□□□□□ -1.49
HMGCR-202ENST00000343975 RPL39LQ96EH5 51 aaKnown RBP5.75□□□□□ -1.49
HMGCR-202ENST00000343975 LY6G6CO95867 125 aa5.74□□□□□ -1.49
HMGCR-202ENST00000343975 C10orf126Q8N4M7 172 aa5.74□□□□□ -1.49
HMGCR-202ENST00000343975 POM121L12Q8N7R1 296 aa5.74□□□□□ -1.49
HMGCR-202ENST00000343975 TMEM70Q9BUB7 260 aa5.74□□□□□ -1.49
HMGCR-202ENST00000343975 K7EMI3 77 aa5.74□□□□□ -1.49
HMGCR-202ENST00000343975 NPYP01303 97 aa5.74□□□□□ -1.49
HMGCR-202ENST00000343975 LAGE3Q14657 143 aa5.73□□□□□ -1.49
HMGCR-202ENST00000343975 LELP1Q5T871 98 aa5.73□□□□□ -1.49
HMGCR-202ENST00000343975 TRBV6-5A0A0K0K1A5 114 aa5.73□□□□□ -1.49
HMGCR-202ENST00000343975 GAGE6Q13070 117 aa5.73□□□□□ -1.49
HMGCR-202ENST00000343975 Q8N8P6 123 aa5.73□□□□□ -1.49
HMGCR-202ENST00000343975 VSIG2Q96IQ7 327 aa5.73□□□□□ -1.49
HMGCR-202ENST00000343975 NBEAL2Q6ZNJ1 2754 aa5.73□□□□□ -1.49
HMGCR-202ENST00000343975 LOC100131303A0A0U1RQF7 123 aa5.73□□□□□ -1.49
HMGCR-202ENST00000343975 IGKV3OR2-268A0A0C4DH90 116 aa5.72□□□□□ -1.49
HMGCR-202ENST00000343975 UBE2D3P61077 147 aa5.72□□□□□ -1.49
HMGCR-202ENST00000343975 UBE2D2P62837 147 aa5.72□□□□□ -1.49
HMGCR-202ENST00000343975 MIEN1Q9BRT3 115 aa5.72□□□□□ -1.49
HMGCR-202ENST00000343975 SIVA1O15304 175 aa5.72□□□□□ -1.49
HMGCR-202ENST00000343975 PSCAO43653 123 aa5.72□□□□□ -1.49
HMGCR-202ENST00000343975 KIF25-AS1Q9Y6Z4 181 aa5.72□□□□□ -1.49
HMGCR-202ENST00000343975 TMEM238LA0A1B0GVL6 79 aa5.72□□□□□ -1.49
HMGCR-202ENST00000343975 ALKBH7Q9BT30 221 aaPredicted RBP5.72□□□□□ -1.49
HMGCR-202ENST00000343975 VAMP8Q9BV40 100 aa5.72□□□□□ -1.49
HMGCR-202ENST00000343975 TRBV6-8A0A0A6YYG3 113 aa5.71□□□□□ -1.49
HMGCR-202ENST00000343975 ATP5LO75964 103 aa5.71□□□□□ -1.49
HMGCR-202ENST00000343975 ANGP03950 147 aaKnown RBP5.71□□□□□ -1.49
HMGCR-202ENST00000343975 RNF185Q96GF1 192 aa5.71□□□□□ -1.49
HMGCR-202ENST00000343975 YPEL4Q96NS1 127 aa5.71□□□□□ -1.49
HMGCR-202ENST00000343975 SCGB3A1Q96QR1 104 aa5.71□□□□□ -1.49
HMGCR-202ENST00000343975 PKD1L1Q8TDX9 2849 aa5.71□□□□□ -1.5
HMGCR-202ENST00000343975 PRSS1P07477 247 aa5.71□□□□□ -1.5
HMGCR-202ENST00000343975 RBX1P62877 108 aa5.71□□□□□ -1.5
HMGCR-202ENST00000343975 DEFB104AQ8WTQ1 72 aa5.71□□□□□ -1.5
HMGCR-202ENST00000343975 HSPB8Q9UJY1 196 aa5.71□□□□□ -1.5
HMGCR-202ENST00000343975 CHCHD1Q96BP2 118 aaKnown RBP5.71□□□□□ -1.5
HMGCR-202ENST00000343975 HBDP02042 147 aa5.7□□□□□ -1.5
HMGCR-202ENST00000343975 VCX2Q9H322 139 aa5.7□□□□□ -1.5
HMGCR-202ENST00000343975 IGHV3-30P01768 117 aa5.7□□□□□ -1.5
HMGCR-202ENST00000343975 IGHV3-33P01772 117 aa5.7□□□□□ -1.5
HMGCR-202ENST00000343975 IGHV3-30-3P0DP02 117 aa5.7□□□□□ -1.5
HMGCR-202ENST00000343975 IGHV3-30-5P0DP03 117 aa5.7□□□□□ -1.5
HMGCR-202ENST00000343975 TIRAPP58753 221 aa5.7□□□□□ -1.5
HMGCR-202ENST00000343975 RPL32P62910 135 aaKnown RBP5.7□□□□□ -1.5
HMGCR-202ENST00000343975 ORAOV1Q8WV07 137 aa5.7□□□□□ -1.5
HMGCR-202ENST00000343975 CHCHD7Q9BUK0 85 aa5.7□□□□□ -1.5
HMGCR-202ENST00000343975 K7ERU9 68 aa5.7□□□□□ -1.5
HMGCR-202ENST00000343975 Q6ZSN1 163 aa5.7□□□□□ -1.5
HMGCR-202ENST00000343975 TM2D2Q9BX73 214 aa5.7□□□□□ -1.5
HMGCR-202ENST00000343975 TRBV27A0A0K0K1C4 114 aa5.69□□□□□ -1.5
HMGCR-202ENST00000343975 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.69□□□□□ -1.5
HMGCR-202ENST00000343975 H7C423 109 aa5.69□□□□□ -1.5
HMGCR-202ENST00000343975 COA6Q5JTJ3 125 aaKnown RBP5.69□□□□□ -1.5
HMGCR-202ENST00000343975 LYPD5Q6UWN5 251 aa5.69□□□□□ -1.5
HMGCR-202ENST00000343975 NIT1Q86X76 327 aa5.69□□□□□ -1.5
HMGCR-202ENST00000343975 UBE2WQ96B02 151 aa5.69□□□□□ -1.5
HMGCR-202ENST00000343975 MRPS16Q9Y3D3 137 aaKnown RBP5.69□□□□□ -1.5
HMGCR-202ENST00000343975 STAB2Q8WWQ8 2551 aa5.69□□□□□ -1.5
HMGCR-202ENST00000343975 LINC00315P59091 139 aa5.69□□□□□ -1.5
HMGCR-202ENST00000343975 SS18Q15532 418 aa5.69□□□□□ -1.5
HMGCR-202ENST00000343975 C2orf66Q6UXQ4 117 aa5.69□□□□□ -1.5
HMGCR-202ENST00000343975 C18orf32Q8TCD1 76 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms