RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 CXCL5P42830 114 aa5.41□□□□□ -1.54
ZNF540-202ENST00000343599 ATXN8Q156A1 80 aa5.41□□□□□ -1.54
ZNF540-202ENST00000343599 C6orf226Q5I0X4 101 aa5.41□□□□□ -1.54
ZNF540-202ENST00000343599 SRSF12Q8WXF0 261 aaKnown RBP5.41□□□□□ -1.54
ZNF540-202ENST00000343599 NXT2Q9NPJ8 142 aaKnown RBP5.41□□□□□ -1.54
ZNF540-202ENST00000343599 PRO1854Q9UHT4 67 aa5.41□□□□□ -1.54
ZNF540-202ENST00000343599 MAP1AP78559 2803 aaPredicted RBP5.4□□□□□ -1.54
ZNF540-202ENST00000343599 TRAV12-1A0A0B4J245 112 aa5.4□□□□□ -1.54
ZNF540-202ENST00000343599 RPL35AP18077 110 aaKnown RBP5.4□□□□□ -1.54
ZNF540-202ENST00000343599 APOC4P55056 127 aa5.4□□□□□ -1.54
ZNF540-202ENST00000343599 ERVK-16P61578 105 aa5.4□□□□□ -1.54
ZNF540-202ENST00000343599 C10orf113Q5VZT2 155 aa5.4□□□□□ -1.54
ZNF540-202ENST00000343599 PATE2Q6UY27 113 aa5.4□□□□□ -1.54
ZNF540-202ENST00000343599 DYNAPQ8N1N2 210 aa5.4□□□□□ -1.54
ZNF540-202ENST00000343599 Q8N8P6 123 aa5.4□□□□□ -1.54
ZNF540-202ENST00000343599 ACYP1P07311 99 aa5.4□□□□□ -1.55
ZNF540-202ENST00000343599 LINC00205P59089 165 aa5.4□□□□□ -1.55
ZNF540-202ENST00000343599 SRSF9Q13242 221 aaKnown RBP eCLIP5.4□□□□□ -1.55
ZNF540-202ENST00000343599 SDIM1Q6ZPB5 146 aa5.4□□□□□ -1.55
ZNF540-202ENST00000343599 C5orf38Q86SI9 138 aa5.4□□□□□ -1.55
ZNF540-202ENST00000343599 C12orf77C9JDV5 145 aa5.39□□□□□ -1.55
ZNF540-202ENST00000343599 COX7A2P2O60397 106 aa5.39□□□□□ -1.55
ZNF540-202ENST00000343599 HERC2O95714 4834 aa5.39□□□□□ -1.55
ZNF540-202ENST00000343599 CKS2P33552 79 aa5.39□□□□□ -1.55
ZNF540-202ENST00000343599 C2orf83Q53S99 150 aa5.39□□□□□ -1.55
ZNF540-202ENST00000343599 THAP8Q8NA92 274 aa5.39□□□□□ -1.55
ZNF540-202ENST00000343599 SLC25A39Q9BZJ4 359 aaPredicted RBP5.39□□□□□ -1.55
ZNF540-202ENST00000343599 HECTD4Q9Y4D8 3996 aa5.39□□□□□ -1.55
ZNF540-202ENST00000343599 HOXD3P31249 432 aaPredicted RBP5.39□□□□□ -1.55
ZNF540-202ENST00000343599 FAM53AQ6NSI3 398 aaPredicted RBP5.39□□□□□ -1.55
ZNF540-202ENST00000343599 KRTAP3-3Q9BYR6 98 aa5.39□□□□□ -1.55
ZNF540-202ENST00000343599 KRTAP3-2Q9BYR7 98 aa5.39□□□□□ -1.55
ZNF540-202ENST00000343599 CYSTM1Q9H1C7 97 aa5.39□□□□□ -1.55
ZNF540-202ENST00000343599 GNG12Q9UBI6 72 aa5.39□□□□□ -1.55
ZNF540-202ENST00000343599 SPG11Q96JI7 2443 aa5.38□□□□□ -1.55
ZNF540-202ENST00000343599 hADV29S1A0JD25 119 aa5.38□□□□□ -1.55
ZNF540-202ENST00000343599 H7C1H1 209 aa5.38□□□□□ -1.55
ZNF540-202ENST00000343599 IGHV3-30P01768 117 aa5.38□□□□□ -1.55
ZNF540-202ENST00000343599 IGHV3-30-5P0DP03 117 aa5.38□□□□□ -1.55
ZNF540-202ENST00000343599 C9orf85Q96MD7 179 aa5.38□□□□□ -1.55
ZNF540-202ENST00000343599 RTTNQ86VV8 2226 aa5.38□□□□□ -1.55
ZNF540-202ENST00000343599 TRAV41A0A0B4J266 112 aa5.38□□□□□ -1.55
ZNF540-202ENST00000343599 A8MTW9 85 aa5.38□□□□□ -1.55
ZNF540-202ENST00000343599 EPM2AB3EWF7 344 aa5.38□□□□□ -1.55
ZNF540-202ENST00000343599 F8VRH5 84 aa5.38□□□□□ -1.55
ZNF540-202ENST00000343599 H3BT86 120 aa5.38□□□□□ -1.55
ZNF540-202ENST00000343599 PROP1O75360 226 aa5.38□□□□□ -1.55
ZNF540-202ENST00000343599 LINC00643Q86TS7 51 aa5.38□□□□□ -1.55
ZNF540-202ENST00000343599 VKORC1L1Q8N0U8 176 aa5.38□□□□□ -1.55
ZNF540-202ENST00000343599 PLEKHB2Q96CS7 222 aa5.38□□□□□ -1.55
ZNF540-202ENST00000343599 UPK3BQ9BT76 320 aa5.38□□□□□ -1.55
ZNF540-202ENST00000343599 AGPAT4-IT1Q9H0P7 198 aa5.38□□□□□ -1.55
ZNF540-202ENST00000343599 IGLV2-18A0A075B6J9 118 aa5.37□□□□□ -1.55
ZNF540-202ENST00000343599 TRAV13-1A0A0B4J241 112 aa5.37□□□□□ -1.55
ZNF540-202ENST00000343599 J3QQQ9 107 aa5.37□□□□□ -1.55
ZNF540-202ENST00000343599 ATOX1O00244 68 aa5.37□□□□□ -1.55
ZNF540-202ENST00000343599 LYZL1Q6UWQ5 148 aa5.37□□□□□ -1.55
ZNF540-202ENST00000343599 EXOC3-AS1Q8N2X6 119 aa5.37□□□□□ -1.55
ZNF540-202ENST00000343599 METTL26Q96S19 204 aa5.37□□□□□ -1.55
ZNF540-202ENST00000343599 SHANK2-AS3Q9BTD1 123 aa5.37□□□□□ -1.55
ZNF540-202ENST00000343599 TRBV7-1A0A0A6YYK4 115 aa5.37□□□□□ -1.55
ZNF540-202ENST00000343599 ZNF815PA8K554 130 aa5.37□□□□□ -1.55
ZNF540-202ENST00000343599 SMKR1H3BMG3 65 aa5.37□□□□□ -1.55
ZNF540-202ENST00000343599 SPINT2O43291 252 aa5.37□□□□□ -1.55
ZNF540-202ENST00000343599 IGHV3-33P01772 117 aa5.37□□□□□ -1.55
ZNF540-202ENST00000343599 PFN2P35080 140 aa5.37□□□□□ -1.55
ZNF540-202ENST00000343599 DSCR8Q96T75 97 aa5.37□□□□□ -1.55
ZNF540-202ENST00000343599 A0A0J9YY99 117 aa5.37□□□□□ -1.55
ZNF540-202ENST00000343599 PRCDQ00LT1 54 aa5.37□□□□□ -1.55
ZNF540-202ENST00000343599 RNF185Q96GF1 192 aa5.37□□□□□ -1.55
ZNF540-202ENST00000343599 Q9H3A6 140 aa5.37□□□□□ -1.55
ZNF540-202ENST00000343599 OTORQ9NRC9 128 aa5.37□□□□□ -1.55
ZNF540-202ENST00000343599 A0A0B4J2C4 111 aa5.36□□□□□ -1.55
ZNF540-202ENST00000343599 MED14OSP0DP75 135 aa5.36□□□□□ -1.55
ZNF540-202ENST00000343599 ZNF22P17026 224 aaPredicted RBP5.36□□□□□ -1.55
ZNF540-202ENST00000343599 LINC00305Q7Z4B0 112 aa5.36□□□□□ -1.55
ZNF540-202ENST00000343599 TMEM75Q8N9X5 138 aa5.36□□□□□ -1.55
ZNF540-202ENST00000343599 TMEM263Q8WUH6 116 aaKnown RBP5.36□□□□□ -1.55
ZNF540-202ENST00000343599 H7C423 109 aa5.36□□□□□ -1.55
ZNF540-202ENST00000343599 CRIP1P50238 77 aa5.36□□□□□ -1.55
ZNF540-202ENST00000343599 SCGB1D4Q6XE38 83 aa5.36□□□□□ -1.55
ZNF540-202ENST00000343599 PRNTQ86SH4 94 aa5.36□□□□□ -1.55
ZNF540-202ENST00000343599 KLHL30-AS1Q8NEE0 82 aa5.36□□□□□ -1.55
ZNF540-202ENST00000343599 DPH3P1Q9H4G8 78 aa5.36□□□□□ -1.55
ZNF540-202ENST00000343599 TRBV30A0A0K0K1B3 111 aa5.35□□□□□ -1.55
ZNF540-202ENST00000343599 H3BNG1 76 aa5.35□□□□□ -1.55
ZNF540-202ENST00000343599 RNASE2P10153 161 aaKnown RBP5.35□□□□□ -1.55
ZNF540-202ENST00000343599 C2orf82Q6UX34 121 aa5.35□□□□□ -1.55
ZNF540-202ENST00000343599 GOLT1AQ6ZVE7 132 aa5.35□□□□□ -1.55
ZNF540-202ENST00000343599 PKIGQ9Y2B9 76 aa5.35□□□□□ -1.55
ZNF540-202ENST00000343599 IGHV7-81A0A0B4J1V7 117 aa5.35□□□□□ -1.55
ZNF540-202ENST00000343599 EIF4EBP3O60516 100 aaPredicted RBP5.35□□□□□ -1.55
ZNF540-202ENST00000343599 MLANAQ16655 118 aa5.35□□□□□ -1.55
ZNF540-202ENST00000343599 SLC25A29Q8N8R3 303 aa5.35□□□□□ -1.55
ZNF540-202ENST00000343599 SMCR5Q8TEV8 140 aa5.35□□□□□ -1.55
ZNF540-202ENST00000343599 AKAP6Q13023 2319 aa5.35□□□□□ -1.55
ZNF540-202ENST00000343599 SACSQ9NZJ4 4579 aa5.35□□□□□ -1.55
ZNF540-202ENST00000343599 CSPG4Q6UVK1 2322 aa5.35□□□□□ -1.55
ZNF540-202ENST00000343599 DNAH2Q9P225 4427 aa5.35□□□□□ -1.55
ZNF540-202ENST00000343599 IGKV1D-37A0A075B6S9 117 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms