RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 LITAFQ99732 161 aa14.58□□□□□ -0.08
CDCA4-201ENST00000336219 RBMY1A1P0DJD3 496 aaKnown RBP14.57□□□□□ -0.08
CDCA4-201ENST00000336219 RBMY1CP0DJD4 496 aa14.57□□□□□ -0.08
CDCA4-201ENST00000336219 RBMY1FQ15415 496 aaKnown RBP14.57□□□□□ -0.08
CDCA4-201ENST00000336219 UBE2E2Q96LR5 201 aa14.57□□□□□ -0.08
CDCA4-201ENST00000336219 ANAPC13Q9BS18 74 aa14.57□□□□□ -0.08
CDCA4-201ENST00000336219 PRRC2AP48634 2157 aaKnown RBP14.57□□□□□ -0.08
CDCA4-201ENST00000336219 ZFAND6Q6FIF0 208 aa14.57□□□□□ -0.08
CDCA4-201ENST00000336219 MAPK1IP1LQ8NDC0 245 aa14.57□□□□□ -0.08
CDCA4-201ENST00000336219 KNCNA6PVL3 124 aa14.56□□□□□ -0.08
CDCA4-201ENST00000336219 TIMM21Q9BVV7 248 aa14.56□□□□□ -0.08
CDCA4-201ENST00000336219 ATXN8Q156A1 80 aa14.56□□□□□ -0.08
CDCA4-201ENST00000336219 CITED1Q99966 193 aa14.56□□□□□ -0.08
CDCA4-201ENST00000336219 ZNF702PQ9H963 129 aa14.56□□□□□ -0.08
CDCA4-201ENST00000336219 TMEM262E9PQX1 116 aa14.55□□□□□ -0.08
CDCA4-201ENST00000336219 TEX29Q8N6K0 151 aa14.55□□□□□ -0.08
CDCA4-201ENST00000336219 UTP20O75691 2785 aaKnown RBP14.55□□□□□ -0.08
CDCA4-201ENST00000336219 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.55□□□□□ -0.08
CDCA4-201ENST00000336219 TRAV4A0A0B4J268 109 aa14.55□□□□□ -0.08
CDCA4-201ENST00000336219 Q6YL49 198 aa14.53□□□□□ -0.08
CDCA4-201ENST00000336219 ANKRD17O75179 2603 aaKnown RBP14.53□□□□□ -0.08
CDCA4-201ENST00000336219 IGSF10Q6WRI0 2623 aa14.53□□□□□ -0.08
CDCA4-201ENST00000336219 EDA2RQ9HAV5 297 aa14.52□□□□□ -0.08
CDCA4-201ENST00000336219 ZANQ9Y493 2812 aa14.52□□□□□ -0.09
CDCA4-201ENST00000336219 USP9YO00507 2555 aaPredicted RBP14.52□□□□□ -0.09
CDCA4-201ENST00000336219 PIEZO1Q92508 2521 aa14.51□□□□□ -0.09
CDCA4-201ENST00000336219 FSHBP01225 129 aa14.51□□□□□ -0.09
CDCA4-201ENST00000336219 CUBNO60494 3623 aa14.51□□□□□ -0.09
CDCA4-201ENST00000336219 NHLRC4P0CG21 123 aaPredicted RBP14.51□□□□□ -0.09
CDCA4-201ENST00000336219 MRPS36P82909 103 aaKnown RBP14.51□□□□□ -0.09
CDCA4-201ENST00000336219 Q6ZSN1 163 aa14.51□□□□□ -0.09
CDCA4-201ENST00000336219 CLEC2BQ92478 149 aa14.51□□□□□ -0.09
CDCA4-201ENST00000336219 NDUFA12Q9UI09 145 aa14.51□□□□□ -0.09
CDCA4-201ENST00000336219 M0QXV9 152 aa14.5□□□□□ -0.09
CDCA4-201ENST00000336219 SLURP1P55000 103 aa14.5□□□□□ -0.09
CDCA4-201ENST00000336219 DEFB131AP59861 70 aa14.5□□□□□ -0.09
CDCA4-201ENST00000336219 DAND5Q8N907 189 aa14.5□□□□□ -0.09
CDCA4-201ENST00000336219 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.5□□□□□ -0.09
CDCA4-201ENST00000336219 TRBV30A0A0K0K1B3 111 aa14.5□□□□□ -0.09
CDCA4-201ENST00000336219 TRBV10-2A0A0K0K1G8 114 aa14.5□□□□□ -0.09
CDCA4-201ENST00000336219 IGKV2-29A2NJV5 120 aaPredicted RBP14.5□□□□□ -0.09
CDCA4-201ENST00000336219 SS18L2Q9UHA2 77 aa14.5□□□□□ -0.09
CDCA4-201ENST00000336219 ICOSQ9Y6W8 199 aa14.5□□□□□ -0.09
CDCA4-201ENST00000336219 NACAE9PAV3 2078 aa14.5□□□□□ -0.09
CDCA4-201ENST00000336219 A8MTW9 85 aa14.49□□□□□ -0.09
CDCA4-201ENST00000336219 DEFB136Q30KP8 78 aa14.49□□□□□ -0.09
CDCA4-201ENST00000336219 IGHV1-58A0A0C4DH39 117 aa14.49□□□□□ -0.09
CDCA4-201ENST00000336219 SNCGO76070 127 aa14.49□□□□□ -0.09
CDCA4-201ENST00000336219 C18orf65Q6ZTR6 163 aa14.49□□□□□ -0.09
CDCA4-201ENST00000336219 PYGO1Q9Y3Y4 419 aa14.49□□□□□ -0.09
CDCA4-201ENST00000336219 IGHV3-38A0A0C4DH36 116 aa14.48□□□□□ -0.09
CDCA4-201ENST00000336219 RBMY1BA6NDE4 496 aaKnown RBP14.48□□□□□ -0.09
CDCA4-201ENST00000336219 RBMY1EA6NEQ0 496 aaKnown RBP14.48□□□□□ -0.09
CDCA4-201ENST00000336219 H3BMM0 161 aa14.48□□□□□ -0.09
CDCA4-201ENST00000336219 RBMY1DP0C7P1 496 aaKnown RBP14.48□□□□□ -0.09
CDCA4-201ENST00000336219 TRAV8-4A0A0B4J246 113 aa14.47□□□□□ -0.09
CDCA4-201ENST00000336219 H7C423 109 aa14.47□□□□□ -0.09
CDCA4-201ENST00000336219 GAGE2BQ13066 116 aa14.47□□□□□ -0.09
CDCA4-201ENST00000336219 GAGE2EQ4V326 116 aa14.47□□□□□ -0.09
CDCA4-201ENST00000336219 C2orf82Q6UX34 121 aa14.47□□□□□ -0.09
CDCA4-201ENST00000336219 GAGE2DQ9UEU5 116 aa14.47□□□□□ -0.09
CDCA4-201ENST00000336219 CREBBPQ92793 2442 aa14.47□□□□□ -0.09
CDCA4-201ENST00000336219 CACNA1AO00555 2505 aa14.47□□□□□ -0.09
CDCA4-201ENST00000336219 UBE2WQ96B02 151 aa14.47□□□□□ -0.09
CDCA4-201ENST00000336219 TNFRSF18Q9Y5U5 241 aa14.47□□□□□ -0.09
CDCA4-201ENST00000336219 CR1P17927 2039 aa14.46□□□□□ -0.09
CDCA4-201ENST00000336219 VSIG2Q96IQ7 327 aa14.46□□□□□ -0.09
CDCA4-201ENST00000336219 DUX3Q96PT4 197 aa14.46□□□□□ -0.1
CDCA4-201ENST00000336219 CHCHD7Q9BUK0 85 aa14.46□□□□□ -0.1
CDCA4-201ENST00000336219 MXRA5Q9NR99 2828 aa14.45□□□□□ -0.1
CDCA4-201ENST00000336219 IGHV4-31P0DP07 118 aa14.45□□□□□ -0.1
CDCA4-201ENST00000336219 MYO18BQ8IUG5 2567 aa14.45□□□□□ -0.1
CDCA4-201ENST00000336219 FBN2P35556 2912 aa14.45□□□□□ -0.1
CDCA4-201ENST00000336219 B5MCH6 92 aa14.45□□□□□ -0.1
CDCA4-201ENST00000336219 MIAQ16674 131 aa14.45□□□□□ -0.1
CDCA4-201ENST00000336219 RPL13AP40429 203 aaKnown RBP14.44□□□□□ -0.1
CDCA4-201ENST00000336219 C15orf53Q8NAA6 179 aa14.44□□□□□ -0.1
CDCA4-201ENST00000336219 LINC00467Q9BRT7 94 aa14.44□□□□□ -0.1
CDCA4-201ENST00000336219 SPANXDQ9BXN6 97 aa14.44□□□□□ -0.1
CDCA4-201ENST00000336219 SPANXCQ9NY87 97 aa14.44□□□□□ -0.1
CDCA4-201ENST00000336219 UBE2D4Q9Y2X8 147 aa14.44□□□□□ -0.1
CDCA4-201ENST00000336219 NDUFV3P56181 108 aaKnown RBP14.44□□□□□ -0.1
CDCA4-201ENST00000336219 TMEM61Q8N0U2 210 aa14.44□□□□□ -0.1
CDCA4-201ENST00000336219 POLQO75417 2590 aa14.44□□□□□ -0.1
CDCA4-201ENST00000336219 TTC32Q5I0X7 151 aa14.43□□□□□ -0.1
CDCA4-201ENST00000336219 PIK3CD-AS1Q5SR53 167 aa14.43□□□□□ -0.1
CDCA4-201ENST00000336219 ZNF415Q09FC8 603 aa14.43□□□□□ -0.1
CDCA4-201ENST00000336219 TINCRA0A1B0GVN0 87 aa14.42□□□□□ -0.1
CDCA4-201ENST00000336219 GAGE5Q13069 117 aa14.41□□□□□ -0.1
CDCA4-201ENST00000336219 GAGE6Q13070 117 aa14.41□□□□□ -0.1
CDCA4-201ENST00000336219 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.41□□□□□ -0.1
CDCA4-201ENST00000336219 CCDC179H3BU77 68 aa14.41□□□□□ -0.1
CDCA4-201ENST00000336219 Q8N2B8 174 aa14.41□□□□□ -0.1
CDCA4-201ENST00000336219 PEMTQ9UBM1 199 aa14.41□□□□□ -0.1
CDCA4-201ENST00000336219 CDKN2A-AS1Q9UH64 79 aa14.41□□□□□ -0.1
CDCA4-201ENST00000336219 ACACBO00763 2458 aa14.41□□□□□ -0.1
CDCA4-201ENST00000336219 A0A0U1RRA0 63 aa14.4□□□□□ -0.1
CDCA4-201ENST00000336219 MAP6D1Q9H9H5 199 aa14.4□□□□□ -0.1
CDCA4-201ENST00000336219 HIST2H2BDQ6DRA6 164 aa14.39□□□□□ -0.11
CDCA4-201ENST00000336219 LINC01600Q96MT4 127 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms