RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 LINC01620Q4KN68 170 aa7.72□□□□□ -1.17
CHD3-201ENST00000330494 ACACBO00763 2458 aa7.72□□□□□ -1.17
CHD3-201ENST00000330494 SND1-IT1Q9HBX3 110 aa7.71□□□□□ -1.17
CHD3-201ENST00000330494 SPATA25Q9BR10 227 aa7.71□□□□□ -1.17
CHD3-201ENST00000330494 COL5A1P20908 1838 aaPredicted RBP7.71□□□□□ -1.17
CHD3-201ENST00000330494 NDUFV3P56181 108 aaKnown RBP7.71□□□□□ -1.18
CHD3-201ENST00000330494 PRRC2AP48634 2157 aaKnown RBP7.71□□□□□ -1.18
CHD3-201ENST00000330494 NOTCH2Q04721 2471 aa7.71□□□□□ -1.18
CHD3-201ENST00000330494 ETDCA0A1B0GVM5 59 aa7.71□□□□□ -1.18
CHD3-201ENST00000330494 LINC01545Q5VT33 79 aa7.71□□□□□ -1.18
CHD3-201ENST00000330494 C18orf65Q6ZTR6 163 aa7.71□□□□□ -1.18
CHD3-201ENST00000330494 Q6ZUT4 128 aa7.71□□□□□ -1.18
CHD3-201ENST00000330494 HIVEP3Q5T1R4 2406 aa7.71□□□□□ -1.18
CHD3-201ENST00000330494 A4D1N5 150 aa7.71□□□□□ -1.18
CHD3-201ENST00000330494 C11orf1Q9H5F2 150 aa7.71□□□□□ -1.18
CHD3-201ENST00000330494 GDF5OSQ5U4N7 250 aa7.7□□□□□ -1.18
CHD3-201ENST00000330494 Q6ZTI0 123 aa7.7□□□□□ -1.18
CHD3-201ENST00000330494 CLEC2BQ92478 149 aa7.7□□□□□ -1.18
CHD3-201ENST00000330494 TMEM263Q8WUH6 116 aaKnown RBP7.7□□□□□ -1.18
CHD3-201ENST00000330494 HIGD2BQ4VC39 106 aa7.7□□□□□ -1.18
CHD3-201ENST00000330494 TOMM6Q96B49 74 aa7.7□□□□□ -1.18
CHD3-201ENST00000330494 Q6ZS46 218 aa7.69□□□□□ -1.18
CHD3-201ENST00000330494 CHKB-CPT1BH3BT56 60 aa7.69□□□□□ -1.18
CHD3-201ENST00000330494 CTRLP40313 264 aa7.69□□□□□ -1.18
CHD3-201ENST00000330494 LY6G6DO95868 133 aa7.69□□□□□ -1.18
CHD3-201ENST00000330494 C11orf71Q6IPW1 123 aa7.68□□□□□ -1.18
CHD3-201ENST00000330494 PRM2P04554 102 aa7.68□□□□□ -1.18
CHD3-201ENST00000330494 P0C879 139 aa7.68□□□□□ -1.18
CHD3-201ENST00000330494 ZNF295-AS1Q8N0V1 137 aa7.68□□□□□ -1.18
CHD3-201ENST00000330494 TET2Q6N021 2002 aaPredicted RBP7.68□□□□□ -1.18
CHD3-201ENST00000330494 C11orf86A6NJI1 115 aa7.68□□□□□ -1.18
CHD3-201ENST00000330494 C14orf132Q9NPU4 83 aa7.68□□□□□ -1.18
CHD3-201ENST00000330494 SMR3AQ99954 134 aa7.68□□□□□ -1.18
CHD3-201ENST00000330494 NDUFA11Q86Y39 141 aa7.67□□□□□ -1.18
CHD3-201ENST00000330494 CLUHP3Q96NS8 147 aa7.67□□□□□ -1.18
CHD3-201ENST00000330494 PROK1P58294 105 aa7.67□□□□□ -1.18
CHD3-201ENST00000330494 SPATA12Q7Z6I5 190 aa7.67□□□□□ -1.18
CHD3-201ENST00000330494 TRBV10-2A0A0K0K1G8 114 aa7.67□□□□□ -1.18
CHD3-201ENST00000330494 C19orf71A6NCJ1 209 aa7.67□□□□□ -1.18
CHD3-201ENST00000330494 LRCOL1A6NCL2 159 aa7.67□□□□□ -1.18
CHD3-201ENST00000330494 Q6ZSV7 163 aa7.67□□□□□ -1.18
CHD3-201ENST00000330494 C11orf45Q8TAV5 145 aa7.67□□□□□ -1.18
CHD3-201ENST00000330494 WFDC10AQ9H1F0 79 aa7.67□□□□□ -1.18
CHD3-201ENST00000330494 LGALS9O00182 355 aa7.67□□□□□ -1.18
CHD3-201ENST00000330494 FAM222AQ5U5X8 452 aa7.67□□□□□ -1.18
CHD3-201ENST00000330494 SPAG11BQ08648 103 aa7.66□□□□□ -1.18
CHD3-201ENST00000330494 RBX1P62877 108 aa7.66□□□□□ -1.18
CHD3-201ENST00000330494 DEFB114Q30KQ6 69 aa7.66□□□□□ -1.18
CHD3-201ENST00000330494 TMEM89A2RUT3 159 aa7.66□□□□□ -1.18
CHD3-201ENST00000330494 LINC00269Q8N2A0 174 aa7.66□□□□□ -1.18
CHD3-201ENST00000330494 TRAV23DV6A0A075B6W5 121 aa7.66□□□□□ -1.18
CHD3-201ENST00000330494 EIF4EBP1Q13541 118 aaPredicted RBP7.66□□□□□ -1.18
CHD3-201ENST00000330494 IGKV2-24A0A0C4DH68 120 aa7.66□□□□□ -1.18
CHD3-201ENST00000330494 TRBV6-1A0A0K0K1D8 114 aa7.65□□□□□ -1.18
CHD3-201ENST00000330494 MIR7-3HGQ8N6C7 128 aa7.65□□□□□ -1.18
CHD3-201ENST00000330494 LY6LH3BQJ8 138 aa7.65□□□□□ -1.18
CHD3-201ENST00000330494 NDUFA1O15239 70 aa7.65□□□□□ -1.18
CHD3-201ENST00000330494 IGLV2-8P01709 118 aa7.65□□□□□ -1.18
CHD3-201ENST00000330494 UBE2AP49459 152 aa7.65□□□□□ -1.19
CHD3-201ENST00000330494 HIGD1BQ9P298 99 aa7.65□□□□□ -1.19
CHD3-201ENST00000330494 C4orf48Q5BLP8 95 aa7.65□□□□□ -1.19
CHD3-201ENST00000330494 LINC00574Q9H8X3 128 aa7.65□□□□□ -1.19
CHD3-201ENST00000330494 PRO0255Q9UI72 69 aa7.65□□□□□ -1.19
CHD3-201ENST00000330494 NAV3Q8IVL0 2385 aa7.64□□□□□ -1.19
CHD3-201ENST00000330494 TCL1BO95988 128 aa7.64□□□□□ -1.19
CHD3-201ENST00000330494 LRRC75A-AS1Q8N1F1 130 aa7.64□□□□□ -1.19
CHD3-201ENST00000330494 MP68P56378 58 aa7.64□□□□□ -1.19
CHD3-201ENST00000330494 ODF1Q14990 250 aa7.64□□□□□ -1.19
CHD3-201ENST00000330494 NFE4Q86UQ8 179 aa7.64□□□□□ -1.19
CHD3-201ENST00000330494 LINC00467Q9BRT7 94 aa7.63□□□□□ -1.19
CHD3-201ENST00000330494 TP73-AS1Q9UF72 201 aa7.63□□□□□ -1.19
CHD3-201ENST00000330494 KLK5Q9Y337 293 aaPredicted RBP7.63□□□□□ -1.19
CHD3-201ENST00000330494 UQCRQO14949 82 aa7.63□□□□□ -1.19
CHD3-201ENST00000330494 CRIP1P50238 77 aa7.63□□□□□ -1.19
CHD3-201ENST00000330494 FAM236DA0A1B0GTK5 79 aa7.63□□□□□ -1.19
CHD3-201ENST00000330494 FAM236CP0DP71 79 aa7.63□□□□□ -1.19
CHD3-201ENST00000330494 C3orf22Q8N5N4 141 aa7.63□□□□□ -1.19
CHD3-201ENST00000330494 PCNTO95613 3336 aa7.62□□□□□ -1.19
CHD3-201ENST00000330494 K7EQG2 157 aa7.62□□□□□ -1.19
CHD3-201ENST00000330494 MLST8Q9BVC4 326 aa7.62□□□□□ -1.19
CHD3-201ENST00000330494 SPANXB1Q9NS25 103 aaPredicted RBP7.62□□□□□ -1.19
CHD3-201ENST00000330494 IGLC6P0CF74 106 aa7.62□□□□□ -1.19
CHD3-201ENST00000330494 MED14OSP0DP75 135 aa7.62□□□□□ -1.19
CHD3-201ENST00000330494 SDIM1Q6ZPB5 146 aa7.62□□□□□ -1.19
CHD3-201ENST00000330494 INSL3P51460 131 aa7.62□□□□□ -1.19
CHD3-201ENST00000330494 C20orf197Q8N268 126 aa7.62□□□□□ -1.19
CHD3-201ENST00000330494 NREPQ16612 68 aa7.62□□□□□ -1.19
CHD3-201ENST00000330494 ZFAND3Q9H8U3 227 aa7.62□□□□□ -1.19
CHD3-201ENST00000330494 E9PLD3 99 aa7.62□□□□□ -1.19
CHD3-201ENST00000330494 FUSP35637 526 aaKnown RBP eCLIP7.62□□□□□ -1.19
CHD3-201ENST00000330494 TEX49A0A1B0GTD5 131 aa7.61□□□□□ -1.19
CHD3-201ENST00000330494 EDN2P20800 178 aa7.61□□□□□ -1.19
CHD3-201ENST00000330494 IGF2RP11717 2491 aa7.61□□□□□ -1.19
CHD3-201ENST00000330494 FAM240AA0A1B0GVK7 77 aa7.61□□□□□ -1.19
CHD3-201ENST00000330494 KRTAP10-9P60411 292 aa7.61□□□□□ -1.19
CHD3-201ENST00000330494 ZNF702PQ9H963 129 aa7.61□□□□□ -1.19
CHD3-201ENST00000330494 TM2D2Q9BX73 214 aa7.61□□□□□ -1.19
CHD3-201ENST00000330494 DEFB131BA0A096LNP1 70 aa7.61□□□□□ -1.19
CHD3-201ENST00000330494 LECT2O14960 151 aa7.61□□□□□ -1.19
CHD3-201ENST00000330494 C20orf203Q8NBC4 194 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms