RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 DAZ2Q13117 558 aaKnown RBP11□□□□□ -0.65
TCOF1-201ENST00000323668 DAZ4Q86SG3 579 aaKnown RBP11□□□□□ -0.65
TCOF1-201ENST00000323668 DAZ3Q9NR90 486 aaKnown RBP11□□□□□ -0.65
TCOF1-201ENST00000323668 SOCS3O14543 225 aa11□□□□□ -0.65
TCOF1-201ENST00000323668 CCL24O00175 119 aa11□□□□□ -0.65
TCOF1-201ENST00000323668 MYO18BQ8IUG5 2567 aa10.99□□□□□ -0.65
TCOF1-201ENST00000323668 MT-ATP8P03928 68 aa10.99□□□□□ -0.65
TCOF1-201ENST00000323668 CLEC2BQ92478 149 aa10.99□□□□□ -0.65
TCOF1-201ENST00000323668 IGHV3-30P01768 117 aa10.99□□□□□ -0.65
TCOF1-201ENST00000323668 IGHV3-33P01772 117 aa10.99□□□□□ -0.65
TCOF1-201ENST00000323668 IGHV3-30-5P0DP03 117 aa10.99□□□□□ -0.65
TCOF1-201ENST00000323668 MIAQ16674 131 aa10.99□□□□□ -0.65
TCOF1-201ENST00000323668 C9orf153Q5TBE3 101 aa10.99□□□□□ -0.65
TCOF1-201ENST00000323668 CFAP126Q5VTH2 177 aa10.99□□□□□ -0.65
TCOF1-201ENST00000323668 SPANXDQ9BXN6 97 aa10.99□□□□□ -0.65
TCOF1-201ENST00000323668 EDA2RQ9HAV5 297 aa10.99□□□□□ -0.65
TCOF1-201ENST00000323668 ACYP1P07311 99 aa10.99□□□□□ -0.65
TCOF1-201ENST00000323668 K7EQD1 137 aa10.98□□□□□ -0.65
TCOF1-201ENST00000323668 PTPRBP23467 1997 aa10.98□□□□□ -0.65
TCOF1-201ENST00000323668 AGRNO00468 2067 aa10.98□□□□□ -0.65
TCOF1-201ENST00000323668 NFE4Q86UQ8 179 aa10.98□□□□□ -0.65
TCOF1-201ENST00000323668 TRAV26-1A0A087WT03 109 aa10.98□□□□□ -0.65
TCOF1-201ENST00000323668 TINCRA0A1B0GVN0 87 aa10.98□□□□□ -0.65
TCOF1-201ENST00000323668 IGIPA6NJ69 53 aa10.98□□□□□ -0.65
TCOF1-201ENST00000323668 CHD8Q9HCK8 2581 aa10.98□□□□□ -0.65
TCOF1-201ENST00000323668 NXPH4O95158 308 aa10.97□□□□□ -0.65
TCOF1-201ENST00000323668 SETD2Q9BYW2 2564 aaPredicted RBP10.97□□□□□ -0.65
TCOF1-201ENST00000323668 LAMTOR3Q9UHA4 124 aa10.97□□□□□ -0.65
TCOF1-201ENST00000323668 CRYGDP07320 174 aa10.97□□□□□ -0.65
TCOF1-201ENST00000323668 INSL3P51460 131 aa10.97□□□□□ -0.65
TCOF1-201ENST00000323668 Q6ZS46 218 aa10.97□□□□□ -0.65
TCOF1-201ENST00000323668 C10orf99Q6UWK7 81 aa10.96□□□□□ -0.65
TCOF1-201ENST00000323668 SPTBN4Q9H254 2564 aa10.96□□□□□ -0.65
TCOF1-201ENST00000323668 DCANP1Q8TF63 244 aa10.96□□□□□ -0.66
TCOF1-201ENST00000323668 C5orf38Q86SI9 138 aa10.96□□□□□ -0.66
TCOF1-201ENST00000323668 SPATA25Q9BR10 227 aa10.96□□□□□ -0.66
TCOF1-201ENST00000323668 CDKN2A-AS1Q9UH64 79 aa10.96□□□□□ -0.66
TCOF1-201ENST00000323668 IGLV1-40P01703 118 aa10.95□□□□□ -0.66
TCOF1-201ENST00000323668 PSMB8P28062 276 aa10.95□□□□□ -0.66
TCOF1-201ENST00000323668 SND1-IT1Q9HBX3 110 aa10.95□□□□□ -0.66
TCOF1-201ENST00000323668 TSHBP01222 138 aa10.95□□□□□ -0.66
TCOF1-201ENST00000323668 C9orf85Q96MD7 179 aa10.95□□□□□ -0.66
TCOF1-201ENST00000323668 A0A1W2PPR1 153 aa10.95□□□□□ -0.66
TCOF1-201ENST00000323668 MAP6D1Q9H9H5 199 aa10.95□□□□□ -0.66
TCOF1-201ENST00000323668 PYGO1Q9Y3Y4 419 aa10.95□□□□□ -0.66
TCOF1-201ENST00000323668 HIVEP2P31629 2446 aa10.94□□□□□ -0.66
TCOF1-201ENST00000323668 TRBV10-1A0A0K0K1A3 114 aa10.94□□□□□ -0.66
TCOF1-201ENST00000323668 SS18L2Q9UHA2 77 aa10.94□□□□□ -0.66
TCOF1-201ENST00000323668 UBE2D1P51668 147 aa10.93□□□□□ -0.66
TCOF1-201ENST00000323668 LINC00467Q9BRT7 94 aa10.93□□□□□ -0.66
TCOF1-201ENST00000323668 TEX49A0A1B0GTD5 131 aa10.93□□□□□ -0.66
TCOF1-201ENST00000323668 TRAV25A0A0B4J276 109 aa10.93□□□□□ -0.66
TCOF1-201ENST00000323668 CRIP2P52943 208 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-201ENST00000323668 PROK1P58294 105 aa10.93□□□□□ -0.66
TCOF1-201ENST00000323668 DEFB113Q30KQ7 82 aa10.93□□□□□ -0.66
TCOF1-201ENST00000323668 XCL1P47992 114 aa10.92□□□□□ -0.66
TCOF1-201ENST00000323668 ABCA2Q9BZC7 2435 aa10.92□□□□□ -0.66
TCOF1-201ENST00000323668 TRBV30A0A0K0K1B3 111 aa10.92□□□□□ -0.66
TCOF1-201ENST00000323668 TRIAP1O43715 76 aa10.92□□□□□ -0.66
TCOF1-201ENST00000323668 C16orf74Q96GX8 76 aa10.92□□□□□ -0.66
TCOF1-201ENST00000323668 C4orf3Q8WVX3 66 aa10.92□□□□□ -0.66
TCOF1-201ENST00000323668 COX7B2Q8TF08 81 aa10.92□□□□□ -0.66
TCOF1-201ENST00000323668 H0YGX0 51 aa10.91□□□□□ -0.66
TCOF1-201ENST00000323668 PRUNE2Q8WUY3 3088 aa10.91□□□□□ -0.66
TCOF1-201ENST00000323668 RNF183Q96D59 192 aa10.91□□□□□ -0.66
TCOF1-201ENST00000323668 LINC01546A6NGU7 62 aa10.9□□□□□ -0.66
TCOF1-201ENST00000323668 IGLV4-69A0A075B6H9 119 aa10.9□□□□□ -0.66
TCOF1-201ENST00000323668 A0A096LPF7 62 aa10.9□□□□□ -0.66
TCOF1-201ENST00000323668 CLPSL2Q6UWE3 100 aa10.9□□□□□ -0.66
TCOF1-201ENST00000323668 TRIOO75962 3097 aa10.9□□□□□ -0.66
TCOF1-201ENST00000323668 CDH23Q9H251 3354 aa10.9□□□□□ -0.66
TCOF1-201ENST00000323668 CFAP54Q96N23 3096 aa10.89□□□□□ -0.67
TCOF1-201ENST00000323668 DAD1P61803 113 aa10.89□□□□□ -0.67
TCOF1-201ENST00000323668 TMEM263Q8WUH6 116 aaKnown RBP10.89□□□□□ -0.67
TCOF1-201ENST00000323668 Q6YL49 198 aa10.88□□□□□ -0.67
TCOF1-201ENST00000323668 MIR7-3HGQ8N6C7 128 aa10.88□□□□□ -0.67
TCOF1-201ENST00000323668 PRORYQ9H606 182 aa10.88□□□□□ -0.67
TCOF1-201ENST00000323668 ANGP03950 147 aaKnown RBP10.88□□□□□ -0.67
TCOF1-201ENST00000323668 F5H768 121 aa10.88□□□□□ -0.67
TCOF1-201ENST00000323668 DEFB114Q30KQ6 69 aa10.88□□□□□ -0.67
TCOF1-201ENST00000323668 UBL5Q9BZL1 73 aa10.88□□□□□ -0.67
TCOF1-201ENST00000323668 A8MZ25 164 aa10.87□□□□□ -0.67
TCOF1-201ENST00000323668 EDN2P20800 178 aa10.87□□□□□ -0.67
TCOF1-201ENST00000323668 TIRAPP58753 221 aa10.87□□□□□ -0.67
TCOF1-201ENST00000323668 Q6ZTI0 123 aa10.87□□□□□ -0.67
TCOF1-201ENST00000323668 TRAV4A0A0B4J268 109 aa10.87□□□□□ -0.67
TCOF1-201ENST00000323668 FAM236AA0A1B0GUQ0 79 aa10.87□□□□□ -0.67
TCOF1-201ENST00000323668 FAM236BA0A1B0GV22 79 aa10.87□□□□□ -0.67
TCOF1-201ENST00000323668 COX7A2LO14548 114 aa10.87□□□□□ -0.67
TCOF1-201ENST00000323668 RS1O15537 224 aa10.87□□□□□ -0.67
TCOF1-201ENST00000323668 XGP55808 180 aa10.87□□□□□ -0.67
TCOF1-201ENST00000323668 UBE2D3P61077 147 aa10.86□□□□□ -0.67
TCOF1-201ENST00000323668 UBE2D2P62837 147 aa10.86□□□□□ -0.67
TCOF1-201ENST00000323668 LINC00308Q8TCZ7 52 aa10.86□□□□□ -0.67
TCOF1-201ENST00000323668 ORMDL1Q9P0S3 153 aa10.86□□□□□ -0.67
TCOF1-201ENST00000323668 BRI3O95415 125 aa10.86□□□□□ -0.67
TCOF1-201ENST00000323668 TSPEAR-AS2P59090 65 aa10.86□□□□□ -0.67
TCOF1-201ENST00000323668 GYPEP15421 78 aa10.86□□□□□ -0.67
TCOF1-201ENST00000323668 NDUFV3P56181 108 aaKnown RBP10.86□□□□□ -0.67
TCOF1-201ENST00000323668 NDUFA1O15239 70 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms