RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 BAALCQ8WXS3 180 aa9.33□□□□□ -0.92
RPP40-201ENST00000319533 YPEL4Q96NS1 127 aa9.33□□□□□ -0.92
RPP40-201ENST00000319533 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.32□□□□□ -0.92
RPP40-201ENST00000319533 Q8N976 141 aa9.32□□□□□ -0.92
RPP40-201ENST00000319533 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.32□□□□□ -0.92
RPP40-201ENST00000319533 ANAPC16Q96DE5 110 aa9.32□□□□□ -0.92
RPP40-201ENST00000319533 RMI2Q96E14 147 aa9.32□□□□□ -0.92
RPP40-201ENST00000319533 CTDSP1Q9GZU7 261 aa9.32□□□□□ -0.92
RPP40-201ENST00000319533 RPP21Q9H633 154 aaKnown RBP9.32□□□□□ -0.92
RPP40-201ENST00000319533 TRBV7-3A0A075B6L6 115 aa9.31□□□□□ -0.92
RPP40-201ENST00000319533 LINC01620Q4KN68 170 aa9.31□□□□□ -0.92
RPP40-201ENST00000319533 NIT1Q86X76 327 aa9.31□□□□□ -0.92
RPP40-201ENST00000319533 C15orf54Q8N8G6 183 aa9.31□□□□□ -0.92
RPP40-201ENST00000319533 CHAC1Q9BUX1 264 aa9.31□□□□□ -0.92
RPP40-201ENST00000319533 PPP1R2P9O14990 202 aa9.3□□□□□ -0.92
RPP40-201ENST00000319533 UBE2D3P61077 147 aa9.3□□□□□ -0.92
RPP40-201ENST00000319533 UBE2D2P62837 147 aa9.3□□□□□ -0.92
RPP40-201ENST00000319533 SERTAD4-AS1Q5TG53 156 aa9.3□□□□□ -0.92
RPP40-201ENST00000319533 URGCP-MRPS24S4R325 110 aa9.3□□□□□ -0.92
RPP40-201ENST00000319533 OXTP01178 125 aa9.29□□□□□ -0.92
RPP40-201ENST00000319533 MGPP08493 103 aa9.29□□□□□ -0.92
RPP40-201ENST00000319533 TRGC1P0CF51 173 aa9.29□□□□□ -0.92
RPP40-201ENST00000319533 CT83Q5H943 113 aa9.29□□□□□ -0.92
RPP40-201ENST00000319533 KCNIP4Q6PIL6 250 aa9.29□□□□□ -0.92
RPP40-201ENST00000319533 LYZL1Q6UWQ5 148 aa9.29□□□□□ -0.92
RPP40-201ENST00000319533 NEXN-AS1Q8NBZ9 246 aa9.29□□□□□ -0.92
RPP40-201ENST00000319533 CIRBP-AS1Q8TBR5 109 aa9.29□□□□□ -0.92
RPP40-201ENST00000319533 DNAJC30Q96LL9 226 aa9.29□□□□□ -0.92
RPP40-201ENST00000319533 CHCHD7Q9BUK0 85 aa9.29□□□□□ -0.92
RPP40-201ENST00000319533 TMEM242Q9NWH2 141 aa9.29□□□□□ -0.92
RPP40-201ENST00000319533 SMIM27A0A1W2PRY6 76 aa9.28□□□□□ -0.92
RPP40-201ENST00000319533 H7C1H1 209 aa9.28□□□□□ -0.92
RPP40-201ENST00000319533 CTRLP40313 264 aa9.28□□□□□ -0.92
RPP40-201ENST00000319533 GTSF1Q8WW33 167 aa9.28□□□□□ -0.92
RPP40-201ENST00000319533 SMCO4Q9NRQ5 59 aa9.28□□□□□ -0.92
RPP40-201ENST00000319533 KIF25-AS1Q9Y6Z4 181 aa9.28□□□□□ -0.92
RPP40-201ENST00000319533 UBR4Q5T4S7 5183 aa9.28□□□□□ -0.92
RPP40-201ENST00000319533 IGKV2D-24A0A075B6R9 120 aa9.27□□□□□ -0.93
RPP40-201ENST00000319533 TGIF2-C20orf24A0A0A6YYL0 155 aa9.27□□□□□ -0.93
RPP40-201ENST00000319533 ELOBQ15370 118 aa9.27□□□□□ -0.93
RPP40-201ENST00000319533 WDR73Q6P4I2 378 aa9.27□□□□□ -0.93
RPP40-201ENST00000319533 TSKUQ8WUA8 353 aa9.27□□□□□ -0.93
RPP40-201ENST00000319533 KLK12Q9UKR0 248 aa9.27□□□□□ -0.93
RPP40-201ENST00000319533 A0A087WX48 190 aa9.26□□□□□ -0.93
RPP40-201ENST00000319533 NTF3P20783 257 aa9.26□□□□□ -0.93
RPP40-201ENST00000319533 TWIST1Q15672 202 aa9.26□□□□□ -0.93
RPP40-201ENST00000319533 DPH3P1Q9H4G8 78 aa9.26□□□□□ -0.93
RPP40-201ENST00000319533 TRBV6-8A0A0A6YYG3 113 aa9.25□□□□□ -0.93
RPP40-201ENST00000319533 COLCA2A8K830 154 aa9.25□□□□□ -0.93
RPP40-201ENST00000319533 A8MWL6 223 aa9.25□□□□□ -0.93
RPP40-201ENST00000319533 TMEM97Q5BJF2 176 aa9.25□□□□□ -0.93
RPP40-201ENST00000319533 SUMO4Q6EEV6 95 aa9.25□□□□□ -0.93
RPP40-201ENST00000319533 SMIM15Q7Z3B0 74 aa9.25□□□□□ -0.93
RPP40-201ENST00000319533 NUP35Q8NFH5 326 aa9.25□□□□□ -0.93
RPP40-201ENST00000319533 UBE2WQ96B02 151 aa9.25□□□□□ -0.93
RPP40-201ENST00000319533 IMMP2LQ96T52 175 aa9.25□□□□□ -0.93
RPP40-201ENST00000319533 HIGD1CA8MV81 97 aa9.24□□□□□ -0.93
RPP40-201ENST00000319533 TMEM262E9PQX1 116 aa9.24□□□□□ -0.93
RPP40-201ENST00000319533 M0QY20 66 aa9.24□□□□□ -0.93
RPP40-201ENST00000319533 PKIAP61925 76 aa9.24□□□□□ -0.93
RPP40-201ENST00000319533 Q0VG73 95 aa9.24□□□□□ -0.93
RPP40-201ENST00000319533 PGLYRP4Q96LB8 373 aa9.24□□□□□ -0.93
RPP40-201ENST00000319533 CNFNQ9BYD5 112 aa9.24□□□□□ -0.93
RPP40-201ENST00000319533 GFRA4Q9GZZ7 299 aa9.24□□□□□ -0.93
RPP40-201ENST00000319533 C14orf177Q52M58 125 aa9.23□□□□□ -0.93
RPP40-201ENST00000319533 RASL11AQ6T310 242 aa9.23□□□□□ -0.93
RPP40-201ENST00000319533 BORCS7Q96B45 105 aa9.23□□□□□ -0.93
RPP40-201ENST00000319533 TRBV24-1A0A075B6N3 115 aa9.22□□□□□ -0.93
RPP40-201ENST00000319533 S100PP25815 95 aa9.22□□□□□ -0.93
RPP40-201ENST00000319533 FOXA3P55318 350 aaPredicted RBP9.22□□□□□ -0.93
RPP40-201ENST00000319533 ENHOQ6UWT2 76 aa9.22□□□□□ -0.93
RPP40-201ENST00000319533 CHCHD5Q9BSY4 110 aa9.22□□□□□ -0.93
RPP40-201ENST00000319533 NAT8BQ9UHF3 227 aa9.22□□□□□ -0.93
RPP40-201ENST00000319533 TRBV25-1A0A075B6N4 114 aa9.21□□□□□ -0.94
RPP40-201ENST00000319533 A0A1B0GXF2 115 aa9.21□□□□□ -0.94
RPP40-201ENST00000319533 FAM231BA6NCW3 169 aa9.21□□□□□ -0.94
RPP40-201ENST00000319533 MRPL54Q6P161 138 aaKnown RBP9.21□□□□□ -0.94
RPP40-201ENST00000319533 TRAV9-1A0A075B6T8 112 aa9.2□□□□□ -0.94
RPP40-201ENST00000319533 C1orf43Q9BWL3 253 aa9.2□□□□□ -0.94
RPP40-201ENST00000319533 NIT2Q9NQR4 276 aa9.2□□□□□ -0.94
RPP40-201ENST00000319533 IGHV1-24A0A0C4DH33 117 aa9.19□□□□□ -0.94
RPP40-201ENST00000319533 CRPP02741 224 aa9.19□□□□□ -0.94
RPP40-201ENST00000319533 BTF3L4Q96K17 158 aa9.19□□□□□ -0.94
RPP40-201ENST00000319533 MRPL18Q9H0U6 180 aaKnown RBP9.19□□□□□ -0.94
RPP40-201ENST00000319533 RAB5AP20339 215 aa9.18□□□□□ -0.94
RPP40-201ENST00000319533 RPL37AP61513 92 aaKnown RBP9.18□□□□□ -0.94
RPP40-201ENST00000319533 IQCJQ1A5X6 159 aa9.18□□□□□ -0.94
RPP40-201ENST00000319533 MPV17L2Q567V2 206 aa9.18□□□□□ -0.94
RPP40-201ENST00000319533 NTM-AS1Q6ZSK4 140 aa9.18□□□□□ -0.94
RPP40-201ENST00000319533 PLA2G2DQ9UNK4 145 aa9.18□□□□□ -0.94
RPP40-201ENST00000319533 A0A1B0GUT8 65 aa9.17□□□□□ -0.94
RPP40-201ENST00000319533 ANGP03950 147 aaKnown RBP9.17□□□□□ -0.94
RPP40-201ENST00000319533 DGAT2L7PQ6IED9 249 aa9.17□□□□□ -0.94
RPP40-201ENST00000319533 TMEM136Q6ZRR5 245 aa9.17□□□□□ -0.94
RPP40-201ENST00000319533 TRAV26-2A0A0B4J265 109 aa9.16□□□□□ -0.94
RPP40-201ENST00000319533 USP17L23D6RBM5 183 aa9.16□□□□□ -0.94
RPP40-201ENST00000319533 HNRNPA3P51991 378 aaKnown RBP9.16□□□□□ -0.94
RPP40-201ENST00000319533 HBBP68871 147 aa9.16□□□□□ -0.94
RPP40-201ENST00000319533 GAGE6Q13070 117 aa9.16□□□□□ -0.94
RPP40-201ENST00000319533 COTL1Q14019 142 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms