RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 GZMBP10144 247 aa11.21□□□□□ -0.61
EXOSC4-201ENST00000316052 RPL35P42766 123 aaKnown RBP11.21□□□□□ -0.61
EXOSC4-201ENST00000316052 SDIM1Q6ZPB5 146 aa11.21□□□□□ -0.61
EXOSC4-201ENST00000316052 M0QY20 66 aa11.2□□□□□ -0.62
EXOSC4-201ENST00000316052 SMIM17P0DL12 118 aa11.2□□□□□ -0.62
EXOSC4-201ENST00000316052 PNRC1Q12796 327 aaPredicted RBP11.2□□□□□ -0.62
EXOSC4-201ENST00000316052 IQCJQ1A5X6 159 aa11.2□□□□□ -0.62
EXOSC4-201ENST00000316052 CLRN3Q8NCR9 226 aa11.2□□□□□ -0.62
EXOSC4-201ENST00000316052 AP1S3Q96PC3 154 aa11.2□□□□□ -0.62
EXOSC4-201ENST00000316052 IGLV10-54A0A075B6I4 117 aa11.18□□□□□ -0.62
EXOSC4-201ENST00000316052 IGLC6P0CF74 106 aa11.18□□□□□ -0.62
EXOSC4-201ENST00000316052 RHEBQ15382 184 aa11.18□□□□□ -0.62
EXOSC4-201ENST00000316052 SUMO4Q6EEV6 95 aa11.18□□□□□ -0.62
EXOSC4-201ENST00000316052 C11orf52Q96A22 123 aa11.18□□□□□ -0.62
EXOSC4-201ENST00000316052 IGHV1-24A0A0C4DH33 117 aa11.17□□□□□ -0.62
EXOSC4-201ENST00000316052 MGPP08493 103 aa11.17□□□□□ -0.62
EXOSC4-201ENST00000316052 REG3AQ06141 175 aa11.17□□□□□ -0.62
EXOSC4-201ENST00000316052 C20orf203Q8NBC4 194 aa11.17□□□□□ -0.62
EXOSC4-201ENST00000316052 TPPP3Q9BW30 176 aa11.17□□□□□ -0.62
EXOSC4-201ENST00000316052 GFRA4Q9GZZ7 299 aa11.17□□□□□ -0.62
EXOSC4-201ENST00000316052 FER1L6-AS1Q8NA97 138 aa11.16□□□□□ -0.62
EXOSC4-201ENST00000316052 NAT8Q9UHE5 227 aa11.16□□□□□ -0.62
EXOSC4-201ENST00000316052 PLA2G2DQ9UNK4 145 aa11.16□□□□□ -0.62
EXOSC4-201ENST00000316052 IGLV4-60A0A075B6I1 120 aa11.15□□□□□ -0.62
EXOSC4-201ENST00000316052 C19orf71A6NCJ1 209 aa11.15□□□□□ -0.62
EXOSC4-201ENST00000316052 ZNF727A8MUV8 499 aa11.15□□□□□ -0.62
EXOSC4-201ENST00000316052 SLPIP03973 132 aa11.15□□□□□ -0.62
EXOSC4-201ENST00000316052 CENPWQ5EE01 88 aa11.15□□□□□ -0.62
EXOSC4-201ENST00000316052 OR2D3Q8NGH3 330 aa11.15□□□□□ -0.62
EXOSC4-201ENST00000316052 CNBPP62633 177 aaKnown RBP11.14□□□□□ -0.63
EXOSC4-201ENST00000316052 CIRBPQ14011 172 aaKnown RBP11.14□□□□□ -0.63
EXOSC4-201ENST00000316052 SMIM7Q9BQ49 75 aa11.14□□□□□ -0.63
EXOSC4-201ENST00000316052 A0A1B0GUV1 79 aa11.13□□□□□ -0.63
EXOSC4-201ENST00000316052 hDV102S1A0JD36 115 aa11.13□□□□□ -0.63
EXOSC4-201ENST00000316052 C7orf77A4D0Y5 90 aa11.13□□□□□ -0.63
EXOSC4-201ENST00000316052 H7C1H1 209 aa11.13□□□□□ -0.63
EXOSC4-201ENST00000316052 SCO1O75880 301 aa11.13□□□□□ -0.63
EXOSC4-201ENST00000316052 CEBPGP53567 150 aa11.13□□□□□ -0.63
EXOSC4-201ENST00000316052 RPS20P60866 119 aaKnown RBP11.13□□□□□ -0.63
EXOSC4-201ENST00000316052 CACNG7P62955 275 aa11.13□□□□□ -0.63
EXOSC4-201ENST00000316052 TMEM241Q24JQ0 296 aa11.13□□□□□ -0.63
EXOSC4-201ENST00000316052 TMEM243Q9BU79 118 aa11.13□□□□□ -0.63
EXOSC4-201ENST00000316052 TNXBP22105 4242 aa11.12□□□□□ -0.63
EXOSC4-201ENST00000316052 TRAV8-4A0A0B4J246 113 aa11.12□□□□□ -0.63
EXOSC4-201ENST00000316052 P01737 135 aa11.12□□□□□ -0.63
EXOSC4-201ENST00000316052 MT1HL1P0DM35 61 aa11.12□□□□□ -0.63
EXOSC4-201ENST00000316052 RASL11AQ6T310 242 aa11.12□□□□□ -0.63
EXOSC4-201ENST00000316052 LYZL1Q6UWQ5 148 aa11.11□□□□□ -0.63
EXOSC4-201ENST00000316052 SMCO4Q9NRQ5 59 aa11.11□□□□□ -0.63
EXOSC4-201ENST00000316052 TMEM242Q9NWH2 141 aa11.11□□□□□ -0.63
EXOSC4-201ENST00000316052 F2Z2F3 143 aa11.1□□□□□ -0.63
EXOSC4-201ENST00000316052 CHTF8P0CG12 524 aa11.1□□□□□ -0.63
EXOSC4-201ENST00000316052 NTF3P20783 257 aa11.1□□□□□ -0.63
EXOSC4-201ENST00000316052 CTDSP1Q9GZU7 261 aa11.1□□□□□ -0.63
EXOSC4-201ENST00000316052 RPS10P5Q9NQ39 176 aa11.1□□□□□ -0.63
EXOSC4-201ENST00000316052 NIT2Q9NQR4 276 aa11.1□□□□□ -0.63
EXOSC4-201ENST00000316052 TRBV20OR9-2A0A075B6H5 130 aa11.09□□□□□ -0.63
EXOSC4-201ENST00000316052 GNG4P50150 75 aa11.09□□□□□ -0.63
EXOSC4-201ENST00000316052 PGLYRP4Q96LB8 373 aa11.09□□□□□ -0.63
EXOSC4-201ENST00000316052 IGHV3-64A0A075B6Q5 118 aa11.08□□□□□ -0.64
EXOSC4-201ENST00000316052 A0A087WYN8 130 aa11.08□□□□□ -0.64
EXOSC4-201ENST00000316052 RPL23P62829 140 aaKnown RBP11.08□□□□□ -0.64
EXOSC4-201ENST00000316052 SMIM12Q96EX1 92 aa11.08□□□□□ -0.64
EXOSC4-201ENST00000316052 DPH3Q96FX2 82 aa11.08□□□□□ -0.64
EXOSC4-201ENST00000316052 DPH3P1Q9H4G8 78 aa11.08□□□□□ -0.64
EXOSC4-201ENST00000316052 XKRY2A2RUG3 117 aa11.07□□□□□ -0.64
EXOSC4-201ENST00000316052 TRGC1P0CF51 173 aa11.07□□□□□ -0.64
EXOSC4-201ENST00000316052 Q6ZRU5 148 aa11.07□□□□□ -0.64
EXOSC4-201ENST00000316052 AP5S1Q9NUS5 200 aa11.07□□□□□ -0.64
EXOSC4-201ENST00000316052 MT-ND4LP03901 98 aa11.06□□□□□ -0.64
EXOSC4-201ENST00000316052 AMTP48728 403 aa11.06□□□□□ -0.64
EXOSC4-201ENST00000316052 COTL1Q14019 142 aa11.06□□□□□ -0.64
EXOSC4-201ENST00000316052 LINC01551Q86U37 167 aa11.06□□□□□ -0.64
EXOSC4-201ENST00000316052 C15orf56Q8N910 161 aa11.06□□□□□ -0.64
EXOSC4-201ENST00000316052 NUDT10Q8NFP7 164 aa11.06□□□□□ -0.64
EXOSC4-201ENST00000316052 SPACA4Q8TDM5 124 aa11.06□□□□□ -0.64
EXOSC4-201ENST00000316052 ANAPC16Q96DE5 110 aa11.06□□□□□ -0.64
EXOSC4-201ENST00000316052 NUDT11Q96G61 164 aa11.06□□□□□ -0.64
EXOSC4-201ENST00000316052 LRP2P98164 4655 aa11.05□□□□□ -0.64
EXOSC4-201ENST00000316052 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.05□□□□□ -0.64
EXOSC4-201ENST00000316052 UBE2L6O14933 153 aa11.05□□□□□ -0.64
EXOSC4-201ENST00000316052 PPP1R2P9O14990 202 aa11.05□□□□□ -0.64
EXOSC4-201ENST00000316052 WDR73Q6P4I2 378 aa11.05□□□□□ -0.64
EXOSC4-201ENST00000316052 CBLN2Q8IUK8 224 aa11.05□□□□□ -0.64
EXOSC4-201ENST00000316052 GATD1Q8NB37 220 aa11.05□□□□□ -0.64
EXOSC4-201ENST00000316052 RNF185Q96GF1 192 aa11.05□□□□□ -0.64
EXOSC4-201ENST00000316052 BIN3Q9NQY0 253 aa11.05□□□□□ -0.64
EXOSC4-201ENST00000316052 TRAV26-2A0A0B4J265 109 aa11.04□□□□□ -0.64
EXOSC4-201ENST00000316052 GAGE12HA6NDE8 117 aa11.04□□□□□ -0.64
EXOSC4-201ENST00000316052 CTRLP40313 264 aa11.04□□□□□ -0.64
EXOSC4-201ENST00000316052 TWIST1Q15672 202 aa11.04□□□□□ -0.64
EXOSC4-201ENST00000316052 ADIRFQ15847 76 aa11.04□□□□□ -0.64
EXOSC4-201ENST00000316052 ISOC2Q96AB3 205 aa11.04□□□□□ -0.64
EXOSC4-201ENST00000316052 PLAC8Q9NZF1 115 aa11.04□□□□□ -0.64
EXOSC4-201ENST00000316052 IGKV3OR2-268A0A0C4DH90 116 aa11.03□□□□□ -0.64
EXOSC4-201ENST00000316052 CNFNQ9BYD5 112 aa11.03□□□□□ -0.64
EXOSC4-201ENST00000316052 COX6A2Q02221 97 aa11.02□□□□□ -0.65
EXOSC4-201ENST00000316052 OCC1Q8TAD7 63 aa11.02□□□□□ -0.65
EXOSC4-201ENST00000316052 YPEL4Q96NS1 127 aa11.02□□□□□ -0.65
EXOSC4-201ENST00000316052 IMMP2LQ96T52 175 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms