RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 TSPEAR-AS2P59090 65 aa8.83□□□□□ -1
LDLRAD3-201ENST00000315571 LMO4P61968 165 aa8.83□□□□□ -1
LDLRAD3-201ENST00000315571 TMEM200BQ69YZ2 307 aa8.83□□□□□ -1
LDLRAD3-201ENST00000315571 DAND5Q8N907 189 aa8.83□□□□□ -1
LDLRAD3-201ENST00000315571 I3L3M4 83 aa8.83□□□□□ -1
LDLRAD3-201ENST00000315571 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.83□□□□□ -1
LDLRAD3-201ENST00000315571 Q96MF0 132 aa8.82□□□□□ -1
LDLRAD3-201ENST00000315571 DPH3P1Q9H4G8 78 aa8.82□□□□□ -1
LDLRAD3-201ENST00000315571 H3BRN7 92 aa8.82□□□□□ -1
LDLRAD3-201ENST00000315571 APCP25054 2843 aa8.82□□□□□ -1
LDLRAD3-201ENST00000315571 TRBV6-1A0A0K0K1D8 114 aa8.82□□□□□ -1
LDLRAD3-201ENST00000315571 IGKV1-17P01599 117 aa8.82□□□□□ -1
LDLRAD3-201ENST00000315571 PVRIGQ6DKI7 326 aa8.82□□□□□ -1
LDLRAD3-201ENST00000315571 C2CD3Q4AC94 2353 aa8.81□□□□□ -1
LDLRAD3-201ENST00000315571 USP17L23D6RBM5 183 aa8.81□□□□□ -1
LDLRAD3-201ENST00000315571 RNF223E7ERA6 249 aa8.81□□□□□ -1
LDLRAD3-201ENST00000315571 RNASE1P07998 156 aaKnown RBP8.81□□□□□ -1
LDLRAD3-201ENST00000315571 DYNAPQ8N1N2 210 aa8.81□□□□□ -1
LDLRAD3-201ENST00000315571 TIMM21Q9BVV7 248 aa8.81□□□□□ -1
LDLRAD3-201ENST00000315571 HOXD3P31249 432 aaPredicted RBP8.81□□□□□ -1
LDLRAD3-201ENST00000315571 PDE6HQ13956 83 aa8.81□□□□□ -1
LDLRAD3-201ENST00000315571 ZNF491Q8N8L2 437 aa8.81□□□□□ -1
LDLRAD3-201ENST00000315571 NRACQ8N912 160 aa8.81□□□□□ -1
LDLRAD3-201ENST00000315571 NOTCH2Q04721 2471 aa8.81□□□□□ -1
LDLRAD3-201ENST00000315571 KNCNA6PVL3 124 aa8.81□□□□□ -1
LDLRAD3-201ENST00000315571 ZFP36P26651 326 aaKnown RBP8.81□□□□□ -1
LDLRAD3-201ENST00000315571 CCDC168Q8NDH2 2452 aa8.8□□□□□ -1
LDLRAD3-201ENST00000315571 TRAV23DV6A0A075B6W5 121 aa8.8□□□□□ -1
LDLRAD3-201ENST00000315571 TRBV7-1A0A0A6YYK4 115 aa8.8□□□□□ -1
LDLRAD3-201ENST00000315571 OPRPNQ99935 248 aaPredicted RBP8.8□□□□□ -1
LDLRAD3-201ENST00000315571 IGLV2-18A0A075B6J9 118 aa8.8□□□□□ -1
LDLRAD3-201ENST00000315571 GHRHP01286 108 aa8.8□□□□□ -1
LDLRAD3-201ENST00000315571 TMEM190Q8WZ59 177 aa8.8□□□□□ -1
LDLRAD3-201ENST00000315571 NDUFC2O95298 119 aa8.79□□□□□ -1
LDLRAD3-201ENST00000315571 PPP1R17O96001 155 aa8.79□□□□□ -1
LDLRAD3-201ENST00000315571 CGB3P0DN86 165 aa8.79□□□□□ -1
LDLRAD3-201ENST00000315571 CGB7P0DN87 165 aa8.79□□□□□ -1
LDLRAD3-201ENST00000315571 TMEM30BQ3MIR4 351 aa8.79□□□□□ -1
LDLRAD3-201ENST00000315571 FAM223AQ8IWN6 122 aa8.79□□□□□ -1
LDLRAD3-201ENST00000315571 MPLKIPQ8TAP9 179 aa8.79□□□□□ -1
LDLRAD3-201ENST00000315571 NDUFA12Q9UI09 145 aa8.79□□□□□ -1
LDLRAD3-201ENST00000315571 LST1O00453 97 aa8.79□□□□□ -1
LDLRAD3-201ENST00000315571 MAPK1IP1LQ8NDC0 245 aa8.79□□□□□ -1
LDLRAD3-201ENST00000315571 RETNQ9HD89 108 aa8.79□□□□□ -1
LDLRAD3-201ENST00000315571 NXPH4O95158 308 aa8.79□□□□□ -1
LDLRAD3-201ENST00000315571 LY6G5BQ8NDX9 201 aa8.79□□□□□ -1
LDLRAD3-201ENST00000315571 A0A0J9YXV3 536 aa8.78□□□□□ -1
LDLRAD3-201ENST00000315571 B4DSR2 109 aa8.78□□□□□ -1
LDLRAD3-201ENST00000315571 LEPROTO15243 131 aa8.78□□□□□ -1
LDLRAD3-201ENST00000315571 SMCR5Q8TEV8 140 aa8.78□□□□□ -1
LDLRAD3-201ENST00000315571 CYSTM1Q9H1C7 97 aa8.78□□□□□ -1
LDLRAD3-201ENST00000315571 A0A087WWL8 130 aa8.78□□□□□ -1
LDLRAD3-201ENST00000315571 TMEM223A0PJW6 202 aa8.78□□□□□ -1
LDLRAD3-201ENST00000315571 PRAC2D3DTV9 90 aa8.78□□□□□ -1
LDLRAD3-201ENST00000315571 IGHV1-8P0DP01 117 aa8.78□□□□□ -1
LDLRAD3-201ENST00000315571 Q9HAA7 133 aa8.78□□□□□ -1
LDLRAD3-201ENST00000315571 MSMBP08118 114 aa8.77□□□□□ -1
LDLRAD3-201ENST00000315571 LINC00574Q9H8X3 128 aa8.77□□□□□ -1
LDLRAD3-201ENST00000315571 CXCL5P42830 114 aa8.77□□□□□ -1.01
LDLRAD3-201ENST00000315571 TIRAPP58753 221 aa8.77□□□□□ -1.01
LDLRAD3-201ENST00000315571 A0A0J9YXY3 114 aa8.77□□□□□ -1.01
LDLRAD3-201ENST00000315571 LINC00311Q8N616 119 aa8.77□□□□□ -1.01
LDLRAD3-201ENST00000315571 VCYO14598 125 aa8.76□□□□□ -1.01
LDLRAD3-201ENST00000315571 IGHG2P01859 326 aa8.76□□□□□ -1.01
LDLRAD3-201ENST00000315571 KRTAP1-3Q8IUG1 177 aa8.76□□□□□ -1.01
LDLRAD3-201ENST00000315571 LINC01356Q8N9X3 169 aa8.76□□□□□ -1.01
LDLRAD3-201ENST00000315571 FLNBO75369 2602 aaKnown RBP8.76□□□□□ -1.01
LDLRAD3-201ENST00000315571 TRAV21A0A0B4J279 112 aa8.76□□□□□ -1.01
LDLRAD3-201ENST00000315571 ITPR2Q14571 2701 aa8.76□□□□□ -1.01
LDLRAD3-201ENST00000315571 RNASE13Q5GAN3 156 aaKnown RBP8.76□□□□□ -1.01
LDLRAD3-201ENST00000315571 C14orf132Q9NPU4 83 aa8.76□□□□□ -1.01
LDLRAD3-201ENST00000315571 PRRC2AP48634 2157 aaKnown RBP8.76□□□□□ -1.01
LDLRAD3-201ENST00000315571 ZNF833PQ6ZTB9 187 aa8.75□□□□□ -1.01
LDLRAD3-201ENST00000315571 TMEM141Q96I45 108 aa8.75□□□□□ -1.01
LDLRAD3-201ENST00000315571 A0A096LNT2 108 aa8.75□□□□□ -1.01
LDLRAD3-201ENST00000315571 SDHAF1A6NFY7 115 aa8.75□□□□□ -1.01
LDLRAD3-201ENST00000315571 HOXB4P17483 251 aaPredicted RBP8.75□□□□□ -1.01
LDLRAD3-201ENST00000315571 Q5XG85 94 aa8.75□□□□□ -1.01
LDLRAD3-201ENST00000315571 VMO1Q7Z5L0 202 aa8.75□□□□□ -1.01
LDLRAD3-201ENST00000315571 IL17DQ8TAD2 202 aa8.75□□□□□ -1.01
LDLRAD3-201ENST00000315571 CD28P10747 220 aa8.75□□□□□ -1.01
LDLRAD3-201ENST00000315571 COPS9Q8WXC6 57 aa8.75□□□□□ -1.01
LDLRAD3-201ENST00000315571 A0A1W2PRX2 142 aa8.74□□□□□ -1.01
LDLRAD3-201ENST00000315571 OXTP01178 125 aa8.74□□□□□ -1.01
LDLRAD3-201ENST00000315571 RNASE4P34096 147 aaKnown RBP8.74□□□□□ -1.01
LDLRAD3-201ENST00000315571 C9orf85Q96MD7 179 aa8.74□□□□□ -1.01
LDLRAD3-201ENST00000315571 DGAT2L7PQ6IED9 249 aa8.74□□□□□ -1.01
LDLRAD3-201ENST00000315571 C2orf48Q96LS8 159 aa8.74□□□□□ -1.01
LDLRAD3-201ENST00000315571 MAP1AP78559 2803 aaPredicted RBP8.74□□□□□ -1.01
LDLRAD3-201ENST00000315571 TRAV12-2A0A075B6T6 113 aa8.73□□□□□ -1.01
LDLRAD3-201ENST00000315571 SIRPDQ9H106 197 aa8.73□□□□□ -1.01
LDLRAD3-201ENST00000315571 IGHV4-31P0DP07 118 aa8.73□□□□□ -1.01
LDLRAD3-201ENST00000315571 ZNF580Q9UK33 172 aa8.73□□□□□ -1.01
LDLRAD3-201ENST00000315571 TMEM86BQ8N661 226 aa8.73□□□□□ -1.01
LDLRAD3-201ENST00000315571 WFDC9Q8NEX5 89 aa8.73□□□□□ -1.01
LDLRAD3-201ENST00000315571 BAHCC1Q9P281 2608 aa8.73□□□□□ -1.01
LDLRAD3-201ENST00000315571 IGLV4-69A0A075B6H9 119 aa8.72□□□□□ -1.01
LDLRAD3-201ENST00000315571 CRYGDP07320 174 aa8.72□□□□□ -1.01
LDLRAD3-201ENST00000315571 IGHV3-30-3P0DP02 117 aa8.72□□□□□ -1.01
LDLRAD3-201ENST00000315571 NBPF19A0A087WUL8 3843 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms