RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 K7ERJ3 54 aa10.13□□□□□ -0.79
RFFL-201ENST00000315249 PTPRBP23467 1997 aa10.13□□□□□ -0.79
RFFL-201ENST00000315249 CRYGBP07316 175 aa10.13□□□□□ -0.79
RFFL-201ENST00000315249 ZNF747Q9BV97 191 aa10.13□□□□□ -0.79
RFFL-201ENST00000315249 MED14OSP0DP75 135 aa10.12□□□□□ -0.79
RFFL-201ENST00000315249 REG3AQ06141 175 aa10.12□□□□□ -0.79
RFFL-201ENST00000315249 TRBV10-1A0A0K0K1A3 114 aa10.12□□□□□ -0.79
RFFL-201ENST00000315249 Q6ZPA2 131 aa10.12□□□□□ -0.79
RFFL-201ENST00000315249 SIGMAR1Q99720 223 aa10.12□□□□□ -0.79
RFFL-201ENST00000315249 ANAPC13Q9BS18 74 aa10.12□□□□□ -0.79
RFFL-201ENST00000315249 GTSF1LQ9H1H1 148 aa10.12□□□□□ -0.79
RFFL-201ENST00000315249 BVES-AS1Q5T3Y7 98 aa10.12□□□□□ -0.79
RFFL-201ENST00000315249 BRWD1-AS2P59051 145 aa10.12□□□□□ -0.79
RFFL-201ENST00000315249 A0A0J9YWU9 116 aa10.11□□□□□ -0.79
RFFL-201ENST00000315249 TRBV20-1A0A075B6N2 111 aa10.11□□□□□ -0.79
RFFL-201ENST00000315249 ZNF80P51504 273 aaPredicted RBP10.11□□□□□ -0.79
RFFL-201ENST00000315249 OPRPNQ99935 248 aaPredicted RBP10.11□□□□□ -0.79
RFFL-201ENST00000315249 BAALCQ8WXS3 180 aa10.11□□□□□ -0.79
RFFL-201ENST00000315249 NANOS2P60321 138 aaKnown RBP10.11□□□□□ -0.79
RFFL-201ENST00000315249 MAJINQ3KP22 176 aa10.1□□□□□ -0.79
RFFL-201ENST00000315249 Q6ZUT4 128 aa10.1□□□□□ -0.79
RFFL-201ENST00000315249 PCP2Q8IVA1 136 aa10.1□□□□□ -0.79
RFFL-201ENST00000315249 ZNF295-AS1Q8N0V1 137 aa10.1□□□□□ -0.79
RFFL-201ENST00000315249 CTRLP40313 264 aa10.1□□□□□ -0.79
RFFL-201ENST00000315249 CARD19Q96LW7 228 aa10.1□□□□□ -0.79
RFFL-201ENST00000315249 MUC4Q99102 2169 aa10.09□□□□□ -0.79
RFFL-201ENST00000315249 IGHV4-30-4P0DP06 118 aa10.09□□□□□ -0.79
RFFL-201ENST00000315249 LYPD6BQ8NI32 183 aa10.09□□□□□ -0.79
RFFL-201ENST00000315249 ORMDL1Q9P0S3 153 aa10.09□□□□□ -0.79
RFFL-201ENST00000315249 PRSS47A8MTI9 375 aa10.09□□□□□ -0.79
RFFL-201ENST00000315249 A0A087WZ39 114 aa10.09□□□□□ -0.79
RFFL-201ENST00000315249 KPRPQ5T749 579 aaPredicted RBP10.09□□□□□ -0.79
RFFL-201ENST00000315249 ZFAND3Q9H8U3 227 aa10.09□□□□□ -0.79
RFFL-201ENST00000315249 POLQO75417 2590 aa10.09□□□□□ -0.79
RFFL-201ENST00000315249 SIVA1O15304 175 aa10.08□□□□□ -0.8
RFFL-201ENST00000315249 ODF3Q96PU9 254 aa10.08□□□□□ -0.8
RFFL-201ENST00000315249 A0A1W2PPR1 153 aa10.08□□□□□ -0.8
RFFL-201ENST00000315249 FUSP35637 526 aaKnown RBP eCLIP10.08□□□□□ -0.8
RFFL-201ENST00000315249 COX11Q9Y6N1 276 aa10.08□□□□□ -0.8
RFFL-201ENST00000315249 PRM2P04554 102 aa10.08□□□□□ -0.8
RFFL-201ENST00000315249 IGLC3P0DOY3 106 aa10.07□□□□□ -0.8
RFFL-201ENST00000315249 CXCL5P42830 114 aa10.07□□□□□ -0.8
RFFL-201ENST00000315249 ANKRD17O75179 2603 aaKnown RBP10.07□□□□□ -0.8
RFFL-201ENST00000315249 PCNTO95613 3336 aa10.07□□□□□ -0.8
RFFL-201ENST00000315249 USP9YO00507 2555 aaPredicted RBP10.07□□□□□ -0.8
RFFL-201ENST00000315249 CRIP3Q6Q6R5 217 aa10.07□□□□□ -0.8
RFFL-201ENST00000315249 TOMM6Q96B49 74 aa10.07□□□□□ -0.8
RFFL-201ENST00000315249 B9D2Q9BPU9 175 aa10.07□□□□□ -0.8
RFFL-201ENST00000315249 LINC00173Q6ZV60 143 aa10.07□□□□□ -0.8
RFFL-201ENST00000315249 C10orf91Q5T1B1 145 aa10.06□□□□□ -0.8
RFFL-201ENST00000315249 BAALC-AS2P0C853 105 aa10.06□□□□□ -0.8
RFFL-201ENST00000315249 TRACP01848 142 aa10.06□□□□□ -0.8
RFFL-201ENST00000315249 MIR7-3HGQ8N6C7 128 aa10.06□□□□□ -0.8
RFFL-201ENST00000315249 P0C879 139 aa10.06□□□□□ -0.8
RFFL-201ENST00000315249 CHCHD10Q8WYQ3 142 aaPredicted RBP10.06□□□□□ -0.8
RFFL-201ENST00000315249 NDUFA7O95182 113 aa10.06□□□□□ -0.8
RFFL-201ENST00000315249 MUSTN1Q8IVN3 82 aa10.06□□□□□ -0.8
RFFL-201ENST00000315249 HIGD2AQ9BW72 106 aa10.06□□□□□ -0.8
RFFL-201ENST00000315249 C10orf142B7Z368 130 aa10.05□□□□□ -0.8
RFFL-201ENST00000315249 ZFAND2AQ8N6M9 145 aa10.05□□□□□ -0.8
RFFL-201ENST00000315249 RS1O15537 224 aa10.05□□□□□ -0.8
RFFL-201ENST00000315249 NDUFS6O75380 124 aaKnown RBP10.05□□□□□ -0.8
RFFL-201ENST00000315249 PROK1P58294 105 aa10.05□□□□□ -0.8
RFFL-201ENST00000315249 RETNQ9HD89 108 aa10.05□□□□□ -0.8
RFFL-201ENST00000315249 CEP350Q5VT06 3117 aa10.05□□□□□ -0.8
RFFL-201ENST00000315249 LINC00467Q9BRT7 94 aa10.04□□□□□ -0.8
RFFL-201ENST00000315249 C9orf118A6NHY6 69 aa10.04□□□□□ -0.8
RFFL-201ENST00000315249 C12orf74Q32Q52 190 aa10.04□□□□□ -0.8
RFFL-201ENST00000315249 A0A096LNI7 61 aa10.04□□□□□ -0.8
RFFL-201ENST00000315249 Q8N6K4 173 aa10.04□□□□□ -0.8
RFFL-201ENST00000315249 DIRC1Q969H9 104 aa10.04□□□□□ -0.8
RFFL-201ENST00000315249 CFC1BP0CG36 223 aa10.03□□□□□ -0.8
RFFL-201ENST00000315249 CFC1P0CG37 223 aa10.03□□□□□ -0.8
RFFL-201ENST00000315249 CFAP126Q5VTH2 177 aa10.03□□□□□ -0.8
RFFL-201ENST00000315249 EIF4EBP1Q13541 118 aaPredicted RBP10.03□□□□□ -0.8
RFFL-201ENST00000315249 CLUHP3Q96NS8 147 aa10.03□□□□□ -0.8
RFFL-201ENST00000315249 C20orf203Q8NBC4 194 aa10.03□□□□□ -0.8
RFFL-201ENST00000315249 H3BMG7 143 aa10.02□□□□□ -0.8
RFFL-201ENST00000315249 IGLV1-40P01703 118 aa10.02□□□□□ -0.8
RFFL-201ENST00000315249 C7orf33Q8WU49 177 aa10.02□□□□□ -0.81
RFFL-201ENST00000315249 NFE4Q86UQ8 179 aa10.02□□□□□ -0.81
RFFL-201ENST00000315249 KIR2DL5BA0A0G2JN68 375 aa10.02□□□□□ -0.81
RFFL-201ENST00000315249 KIR2DL5BA0A0G2JPC4 375 aa10.02□□□□□ -0.81
RFFL-201ENST00000315249 UBE2V1Q13404 147 aa10.02□□□□□ -0.81
RFFL-201ENST00000315249 LINC00322Q6ZN03 302 aaPredicted RBP10.02□□□□□ -0.81
RFFL-201ENST00000315249 KIR2DL5AQ8N109 375 aa10.02□□□□□ -0.81
RFFL-201ENST00000315249 Q8N976 141 aa10.02□□□□□ -0.81
RFFL-201ENST00000315249 KIR2DL5BQ8NHK3 375 aa10.02□□□□□ -0.81
RFFL-201ENST00000315249 NEXN-AS1Q8NBZ9 246 aa10.02□□□□□ -0.81
RFFL-201ENST00000315249 PCP4P48539 62 aa10.01□□□□□ -0.81
RFFL-201ENST00000315249 TRBV6-8A0A0A6YYG3 113 aa10.01□□□□□ -0.81
RFFL-201ENST00000315249 NDUFB1O75438 58 aa10.01□□□□□ -0.81
RFFL-201ENST00000315249 A4D1N5 150 aa10.01□□□□□ -0.81
RFFL-201ENST00000315249 C11orf86A6NJI1 115 aa10.01□□□□□ -0.81
RFFL-201ENST00000315249 BRI3O95415 125 aa10.01□□□□□ -0.81
RFFL-201ENST00000315249 IFITM1P13164 125 aa10.01□□□□□ -0.81
RFFL-201ENST00000315249 FAM19A5Q7Z5A7 132 aaPredicted RBP10.01□□□□□ -0.81
RFFL-201ENST00000315249 C19orf71A6NCJ1 209 aa10.01□□□□□ -0.81
RFFL-201ENST00000315249 FRMD6-AS1P0C7T7 363 aa10□□□□□ -0.81
RFFL-201ENST00000315249 LOC100131303A0A0U1RQF7 123 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms