RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 ZNF295-AS1Q8N0V1 137 aa11.7□□□□□ -0.54
LEMD3-201ENST00000308330 FAM167A-AS1Q96KT0 104 aa11.7□□□□□ -0.54
LEMD3-201ENST00000308330 Q9HAA7 133 aa11.7□□□□□ -0.54
LEMD3-201ENST00000308330 I3L3M4 83 aa11.7□□□□□ -0.54
LEMD3-201ENST00000308330 CD164Q04900 197 aa11.69□□□□□ -0.54
LEMD3-201ENST00000308330 PTPRSQ13332 1948 aa11.68□□□□□ -0.54
LEMD3-201ENST00000308330 XCL1P47992 114 aa11.68□□□□□ -0.54
LEMD3-201ENST00000308330 SMCPP49901 116 aaPredicted RBP11.68□□□□□ -0.54
LEMD3-201ENST00000308330 XCL2Q9UBD3 114 aa11.68□□□□□ -0.54
LEMD3-201ENST00000308330 TRGV1A0A0A0MS02 117 aa11.68□□□□□ -0.54
LEMD3-201ENST00000308330 LST1O00453 97 aa11.68□□□□□ -0.54
LEMD3-201ENST00000308330 IGHV3-30P01768 117 aa11.68□□□□□ -0.54
LEMD3-201ENST00000308330 IGHV3-30-5P0DP03 117 aa11.68□□□□□ -0.54
LEMD3-201ENST00000308330 ZFP36P26651 326 aaKnown RBP11.68□□□□□ -0.54
LEMD3-201ENST00000308330 KMT2EQ8IZD2 1858 aa11.68□□□□□ -0.54
LEMD3-201ENST00000308330 UBE2D1P51668 147 aa11.68□□□□□ -0.54
LEMD3-201ENST00000308330 SUMO4Q6EEV6 95 aa11.68□□□□□ -0.54
LEMD3-201ENST00000308330 LINC00336Q6ZUF6 198 aa11.68□□□□□ -0.54
LEMD3-201ENST00000308330 ACANP16112 2415 aa11.68□□□□□ -0.54
LEMD3-201ENST00000308330 DNAH12Q6ZR08 3092 aa11.67□□□□□ -0.54
LEMD3-201ENST00000308330 CHKB-CPT1BH3BT56 60 aa11.67□□□□□ -0.54
LEMD3-201ENST00000308330 TIRAPP58753 221 aa11.67□□□□□ -0.54
LEMD3-201ENST00000308330 LINC00322Q6ZN03 302 aaPredicted RBP11.67□□□□□ -0.54
LEMD3-201ENST00000308330 C5orf38Q86SI9 138 aa11.67□□□□□ -0.54
LEMD3-201ENST00000308330 KRTAP27-1Q3LI81 207 aa11.66□□□□□ -0.54
LEMD3-201ENST00000308330 THAP8Q8NA92 274 aa11.66□□□□□ -0.54
LEMD3-201ENST00000308330 A6NED7 52 aa11.66□□□□□ -0.54
LEMD3-201ENST00000308330 DEFB130BP0DP73 79 aa11.66□□□□□ -0.54
LEMD3-201ENST00000308330 DEFB130AP0DP74 79 aa11.66□□□□□ -0.54
LEMD3-201ENST00000308330 CEMP1Q6PRD7 247 aaPredicted RBP11.66□□□□□ -0.54
LEMD3-201ENST00000308330 NACAE9PAV3 2078 aa11.66□□□□□ -0.54
LEMD3-201ENST00000308330 TRBV7-6A0A0J9YX20 115 aa11.66□□□□□ -0.54
LEMD3-201ENST00000308330 LECT2O14960 151 aa11.66□□□□□ -0.54
LEMD3-201ENST00000308330 IGHV3-53P01767 116 aa11.65□□□□□ -0.54
LEMD3-201ENST00000308330 Q9H8V8 135 aa11.65□□□□□ -0.54
LEMD3-201ENST00000308330 A0A0J9YXV3 536 aa11.65□□□□□ -0.54
LEMD3-201ENST00000308330 HIST2H2BDQ6DRA6 164 aa11.65□□□□□ -0.54
LEMD3-201ENST00000308330 UBE2DNLQ8IWF7 75 aa11.65□□□□□ -0.54
LEMD3-201ENST00000308330 A0A087WVE0 104 aa11.65□□□□□ -0.54
LEMD3-201ENST00000308330 INSP01308 110 aa11.65□□□□□ -0.54
LEMD3-201ENST00000308330 ZMAT4Q9H898 229 aa11.65□□□□□ -0.54
LEMD3-201ENST00000308330 HHLA3Q9XRX5 114 aa11.64□□□□□ -0.55
LEMD3-201ENST00000308330 TRAV7A0A075B6U4 112 aa11.64□□□□□ -0.55
LEMD3-201ENST00000308330 HCFC1P51610 2035 aa11.64□□□□□ -0.55
LEMD3-201ENST00000308330 UBE2AP49459 152 aa11.64□□□□□ -0.55
LEMD3-201ENST00000308330 DEFB136Q30KP8 78 aa11.64□□□□□ -0.55
LEMD3-201ENST00000308330 PRRC2CQ9Y520 2896 aaKnown RBP11.64□□□□□ -0.55
LEMD3-201ENST00000308330 EML6Q6ZMW3 1958 aa11.63□□□□□ -0.55
LEMD3-201ENST00000308330 NDUFA4O00483 81 aa11.63□□□□□ -0.55
LEMD3-201ENST00000308330 TANC2Q9HCD6 1990 aa11.63□□□□□ -0.55
LEMD3-201ENST00000308330 IGHV3-73A0A0B4J1V6 119 aa11.62□□□□□ -0.55
LEMD3-201ENST00000308330 MIAQ16674 131 aa11.62□□□□□ -0.55
LEMD3-201ENST00000308330 CCL24O00175 119 aa11.62□□□□□ -0.55
LEMD3-201ENST00000308330 C4orf48Q5BLP8 95 aa11.62□□□□□ -0.55
LEMD3-201ENST00000308330 TMEM223A0PJW6 202 aa11.62□□□□□ -0.55
LEMD3-201ENST00000308330 MIFP14174 115 aa11.62□□□□□ -0.55
LEMD3-201ENST00000308330 NDUFS5O43920 106 aa11.62□□□□□ -0.55
LEMD3-201ENST00000308330 PATE2Q6UY27 113 aa11.62□□□□□ -0.55
LEMD3-201ENST00000308330 RPL39LQ96EH5 51 aaKnown RBP11.62□□□□□ -0.55
LEMD3-201ENST00000308330 A0A0J9YXY3 114 aa11.61□□□□□ -0.55
LEMD3-201ENST00000308330 PROP1O75360 226 aa11.61□□□□□ -0.55
LEMD3-201ENST00000308330 SPINK13Q1W4C9 94 aa11.61□□□□□ -0.55
LEMD3-201ENST00000308330 GP9P14770 177 aa11.61□□□□□ -0.55
LEMD3-201ENST00000308330 LMO4P61968 165 aa11.61□□□□□ -0.55
LEMD3-201ENST00000308330 SERTAD4-AS1Q5TG53 156 aa11.61□□□□□ -0.55
LEMD3-201ENST00000308330 NEXN-AS1Q8NBZ9 246 aa11.61□□□□□ -0.55
LEMD3-201ENST00000308330 Q6ZSR3 168 aa11.61□□□□□ -0.55
LEMD3-201ENST00000308330 FAM19A4Q96LR4 140 aa11.6□□□□□ -0.55
LEMD3-201ENST00000308330 WI2-2373I1.2A0A1W2PRP0 233 aa11.6□□□□□ -0.55
LEMD3-201ENST00000308330 H3BRN7 92 aa11.6□□□□□ -0.55
LEMD3-201ENST00000308330 PIK3CD-AS1Q5SR53 167 aa11.6□□□□□ -0.55
LEMD3-201ENST00000308330 TMEM263Q8WUH6 116 aaKnown RBP11.6□□□□□ -0.55
LEMD3-201ENST00000308330 MP68P56378 58 aa11.6□□□□□ -0.55
LEMD3-201ENST00000308330 C17orf77Q96MU5 243 aa11.6□□□□□ -0.55
LEMD3-201ENST00000308330 RNASE13Q5GAN3 156 aaKnown RBP11.59□□□□□ -0.55
LEMD3-201ENST00000308330 Q8N7P7 452 aa11.59□□□□□ -0.55
LEMD3-201ENST00000308330 PLXNB1O43157 2135 aa11.59□□□□□ -0.55
LEMD3-201ENST00000308330 IGHV7-81A0A0B4J1V7 117 aa11.59□□□□□ -0.55
LEMD3-201ENST00000308330 U3KQK5 164 aa11.59□□□□□ -0.55
LEMD3-201ENST00000308330 KIAA1549LQ6ZVL6 1849 aa11.58□□□□□ -0.56
LEMD3-201ENST00000308330 TRBV27A0A0K0K1C4 114 aa11.58□□□□□ -0.56
LEMD3-201ENST00000308330 CRYGDP07320 174 aa11.58□□□□□ -0.56
LEMD3-201ENST00000308330 IGLV1-47P01700 117 aa11.57□□□□□ -0.56
LEMD3-201ENST00000308330 H3BUA1 57 aa11.57□□□□□ -0.56
LEMD3-201ENST00000308330 RPL39P62891 51 aaKnown RBP11.57□□□□□ -0.56
LEMD3-201ENST00000308330 SND1-IT1Q9HBX3 110 aa11.57□□□□□ -0.56
LEMD3-201ENST00000308330 TRBV6-1A0A0K0K1D8 114 aa11.56□□□□□ -0.56
LEMD3-201ENST00000308330 A8MZ25 164 aa11.56□□□□□ -0.56
LEMD3-201ENST00000308330 PSPHP1O15172 72 aa11.56□□□□□ -0.56
LEMD3-201ENST00000308330 IGHV3-30-3P0DP02 117 aa11.56□□□□□ -0.56
LEMD3-201ENST00000308330 PLA2G2AP14555 144 aa11.56□□□□□ -0.56
LEMD3-201ENST00000308330 ARHGAP32A7KAX9 2087 aa11.56□□□□□ -0.56
LEMD3-201ENST00000308330 PCNTO95613 3336 aa11.56□□□□□ -0.56
LEMD3-201ENST00000308330 IGHV7-4-1A0A0J9YVY3 117 aa11.56□□□□□ -0.56
LEMD3-201ENST00000308330 PLAC8L1A1L4L8 177 aa11.56□□□□□ -0.56
LEMD3-201ENST00000308330 TMEM256-PLSCR3K7ERE1 68 aa11.56□□□□□ -0.56
LEMD3-201ENST00000308330 Q8N9W7 124 aa11.56□□□□□ -0.56
LEMD3-201ENST00000308330 IGKV1OR2-108A0A075B7D4 117 aa11.55□□□□□ -0.56
LEMD3-201ENST00000308330 LRCOL1A6NCL2 159 aa11.55□□□□□ -0.56
LEMD3-201ENST00000308330 MRPL36Q9P0J6 103 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms