RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 CSRP3P50461 194 aa10.38□□□□□ -0.75
TRIM56-201ENST00000306085 TRBV27A0A0K0K1C4 114 aa10.37□□□□□ -0.75
TRIM56-201ENST00000306085 E9PLD3 99 aa10.37□□□□□ -0.75
TRIM56-201ENST00000306085 Q8TCH9 128 aa10.37□□□□□ -0.75
TRIM56-201ENST00000306085 LENEPQ9Y5L5 61 aa10.37□□□□□ -0.75
TRIM56-201ENST00000306085 PLA2G2AP14555 144 aa10.37□□□□□ -0.75
TRIM56-201ENST00000306085 FAM19A3Q7Z5A8 133 aa10.37□□□□□ -0.75
TRIM56-201ENST00000306085 LOXP28300 417 aaPredicted RBP10.37□□□□□ -0.75
TRIM56-201ENST00000306085 BLCAPP62952 87 aa10.37□□□□□ -0.75
TRIM56-201ENST00000306085 CD59P13987 128 aa10.37□□□□□ -0.75
TRIM56-201ENST00000306085 ZFAND3Q9H8U3 227 aa10.37□□□□□ -0.75
TRIM56-201ENST00000306085 PIEZO1Q92508 2521 aa10.37□□□□□ -0.75
TRIM56-201ENST00000306085 COA6Q5JTJ3 125 aaKnown RBP10.37□□□□□ -0.75
TRIM56-201ENST00000306085 MSRB1Q9NZV6 116 aa10.36□□□□□ -0.75
TRIM56-201ENST00000306085 PRYO14603 147 aa10.36□□□□□ -0.75
TRIM56-201ENST00000306085 WT1P19544 449 aaPredicted RBP10.36□□□□□ -0.75
TRIM56-201ENST00000306085 WFDC13Q8IUB5 93 aa10.36□□□□□ -0.75
TRIM56-201ENST00000306085 FAM222AQ5U5X8 452 aa10.36□□□□□ -0.75
TRIM56-201ENST00000306085 X6R8D5 127 aa10.36□□□□□ -0.75
TRIM56-201ENST00000306085 H3BUA1 57 aa10.35□□□□□ -0.75
TRIM56-201ENST00000306085 UBE2D3P61077 147 aa10.35□□□□□ -0.75
TRIM56-201ENST00000306085 UBE2D1P51668 147 aa10.34□□□□□ -0.75
TRIM56-201ENST00000306085 MED14OSP0DP75 135 aa10.34□□□□□ -0.75
TRIM56-201ENST00000306085 B3GALT5-AS1P59052 145 aa10.34□□□□□ -0.75
TRIM56-201ENST00000306085 FAM30AQ9NZY2 134 aa10.34□□□□□ -0.75
TRIM56-201ENST00000306085 CCKP06307 115 aa10.33□□□□□ -0.76
TRIM56-201ENST00000306085 Q6ZVQ6 151 aa10.33□□□□□ -0.76
TRIM56-201ENST00000306085 LYRM9A8MSI8 78 aa10.33□□□□□ -0.76
TRIM56-201ENST00000306085 M0QXV9 152 aa10.33□□□□□ -0.76
TRIM56-201ENST00000306085 ODF1Q14990 250 aa10.33□□□□□ -0.76
TRIM56-201ENST00000306085 NUPR1O60356 82 aa10.32□□□□□ -0.76
TRIM56-201ENST00000306085 C15orf65H3BRN8 121 aa10.32□□□□□ -0.76
TRIM56-201ENST00000306085 FAM19A5Q7Z5A7 132 aaPredicted RBP10.32□□□□□ -0.76
TRIM56-201ENST00000306085 LINC00269Q8N2A0 174 aa10.32□□□□□ -0.76
TRIM56-201ENST00000306085 LINC00311Q8N616 119 aa10.32□□□□□ -0.76
TRIM56-201ENST00000306085 WDR90Q96KV7 1748 aa10.32□□□□□ -0.76
TRIM56-201ENST00000306085 DCANP1Q8TF63 244 aa10.32□□□□□ -0.76
TRIM56-201ENST00000306085 PTPRSQ13332 1948 aa10.31□□□□□ -0.76
TRIM56-201ENST00000306085 UFSP1Q6NVU6 142 aa10.31□□□□□ -0.76
TRIM56-201ENST00000306085 CEMP1Q6PRD7 247 aaPredicted RBP10.31□□□□□ -0.76
TRIM56-201ENST00000306085 POM121L12Q8N7R1 296 aa10.3□□□□□ -0.76
TRIM56-201ENST00000306085 CRYGDP07320 174 aa10.3□□□□□ -0.76
TRIM56-201ENST00000306085 TMEM223A0PJW6 202 aa10.3□□□□□ -0.76
TRIM56-201ENST00000306085 MTORP42345 2549 aa10.29□□□□□ -0.76
TRIM56-201ENST00000306085 FHL1Q13642 323 aa10.29□□□□□ -0.76
TRIM56-201ENST00000306085 VWCEQ96DN2 955 aa10.29□□□□□ -0.76
TRIM56-201ENST00000306085 Q6ZR03 302 aa10.29□□□□□ -0.76
TRIM56-201ENST00000306085 SERTAD4-AS1Q5TG53 156 aa10.28□□□□□ -0.76
TRIM56-201ENST00000306085 AJUBAQ96IF1 538 aa10.28□□□□□ -0.76
TRIM56-201ENST00000306085 XAGE1AQ9HD64 81 aa10.28□□□□□ -0.76
TRIM56-201ENST00000306085 Q6ZS92 163 aa10.28□□□□□ -0.76
TRIM56-201ENST00000306085 P0DMU3 169 aa10.28□□□□□ -0.76
TRIM56-201ENST00000306085 FAM231AP0DMU4 169 aa10.28□□□□□ -0.76
TRIM56-201ENST00000306085 FAM231CP0DMU5 169 aa10.28□□□□□ -0.76
TRIM56-201ENST00000306085 KAAG1Q9UBP8 84 aa10.28□□□□□ -0.76
TRIM56-201ENST00000306085 RBX1P62877 108 aa10.27□□□□□ -0.77
TRIM56-201ENST00000306085 C22orf34Q6ZV56 151 aa10.27□□□□□ -0.77
TRIM56-201ENST00000306085 SPATA12Q7Z6I5 190 aa10.27□□□□□ -0.77
TRIM56-201ENST00000306085 PPDPFQ9H3Y8 114 aa10.27□□□□□ -0.77
TRIM56-201ENST00000306085 MDFICQ9P1T7 246 aa10.27□□□□□ -0.77
TRIM56-201ENST00000306085 REG3AQ06141 175 aa10.27□□□□□ -0.77
TRIM56-201ENST00000306085 CCDC179H3BU77 68 aa10.27□□□□□ -0.77
TRIM56-201ENST00000306085 C7orf33Q8WU49 177 aa10.27□□□□□ -0.77
TRIM56-201ENST00000306085 PIEZO2Q9H5I5 2752 aa10.27□□□□□ -0.77
TRIM56-201ENST00000306085 A0A0J9YXY3 114 aa10.27□□□□□ -0.77
TRIM56-201ENST00000306085 PLA2G1BP04054 148 aaKnown RBP10.27□□□□□ -0.77
TRIM56-201ENST00000306085 ZFAND2AQ8N6M9 145 aa10.26□□□□□ -0.77
TRIM56-201ENST00000306085 C2orf70A6NJV1 201 aa10.26□□□□□ -0.77
TRIM56-201ENST00000306085 WFDC10AQ9H1F0 79 aa10.26□□□□□ -0.77
TRIM56-201ENST00000306085 IGKV2-28A0A075B6P5 120 aa10.26□□□□□ -0.77
TRIM56-201ENST00000306085 IGKV2D-28P01615 120 aa10.26□□□□□ -0.77
TRIM56-201ENST00000306085 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.25□□□□□ -0.77
TRIM56-201ENST00000306085 LINC00694P0DN24 101 aa10.25□□□□□ -0.77
TRIM56-201ENST00000306085 RITA1Q96K30 269 aa10.25□□□□□ -0.77
TRIM56-201ENST00000306085 TRBV6-1A0A0K0K1D8 114 aa10.25□□□□□ -0.77
TRIM56-201ENST00000306085 IGLV9-49A0A0B4J1Y8 123 aa10.25□□□□□ -0.77
TRIM56-201ENST00000306085 CTRLP40313 264 aa10.25□□□□□ -0.77
TRIM56-201ENST00000306085 NANOS2P60321 138 aaKnown RBP10.25□□□□□ -0.77
TRIM56-201ENST00000306085 DEFB1P60022 68 aa10.25□□□□□ -0.77
TRIM56-201ENST00000306085 PSPHP1O15172 72 aa10.24□□□□□ -0.77
TRIM56-201ENST00000306085 SOSTDC1Q6X4U4 206 aa10.24□□□□□ -0.77
TRIM56-201ENST00000306085 VPREB1P12018 145 aa10.24□□□□□ -0.77
TRIM56-201ENST00000306085 TRBV7-6A0A0J9YX20 115 aa10.24□□□□□ -0.77
TRIM56-201ENST00000306085 LRRC75A-AS1Q8N1F1 130 aa10.24□□□□□ -0.77
TRIM56-201ENST00000306085 Q6Q795 121 aa10.24□□□□□ -0.77
TRIM56-201ENST00000306085 SMAD5-AS1Q9Y6J3 95 aa10.24□□□□□ -0.77
TRIM56-201ENST00000306085 J3QKU1 62 aa10.24□□□□□ -0.77
TRIM56-201ENST00000306085 C11orf45Q8TAV5 145 aa10.24□□□□□ -0.77
TRIM56-201ENST00000306085 CHCHD10Q8WYQ3 142 aaPredicted RBP10.23□□□□□ -0.77
TRIM56-201ENST00000306085 PRAC2D3DTV9 90 aa10.23□□□□□ -0.77
TRIM56-201ENST00000306085 UBE2D2P62837 147 aa10.23□□□□□ -0.77
TRIM56-201ENST00000306085 TRIAP1O43715 76 aa10.23□□□□□ -0.77
TRIM56-201ENST00000306085 SMIM9A6NGZ8 99 aa10.22□□□□□ -0.77
TRIM56-201ENST00000306085 IGHV7-81A0A0B4J1V7 117 aa10.21□□□□□ -0.77
TRIM56-201ENST00000306085 FOXL2NBQ6ZUU3 175 aa10.21□□□□□ -0.77
TRIM56-201ENST00000306085 PRSS33Q8NF86 280 aa10.21□□□□□ -0.77
TRIM56-201ENST00000306085 K7ENP7 123 aa10.21□□□□□ -0.78
TRIM56-201ENST00000306085 C4orf3Q8WVX3 66 aa10.21□□□□□ -0.78
TRIM56-201ENST00000306085 K7EIM0 57 aa10.21□□□□□ -0.78
TRIM56-201ENST00000306085 RETNLBQ9BQ08 111 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms