RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 TMEM219Q86XT9 240 aa7.74□□□□□ -1.17
SKA1-201ENST00000285116 DAZ1Q9NQZ3 744 aaKnown RBP7.74□□□□□ -1.17
SKA1-201ENST00000285116 SPRY2O43597 315 aa7.73□□□□□ -1.17
SKA1-201ENST00000285116 LINC01620Q4KN68 170 aa7.73□□□□□ -1.17
SKA1-201ENST00000285116 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.73□□□□□ -1.17
SKA1-201ENST00000285116 ZNF876PQ49A33 203 aa7.73□□□□□ -1.17
SKA1-201ENST00000285116 C9orf85Q96MD7 179 aa7.73□□□□□ -1.17
SKA1-201ENST00000285116 GNRH2O43555 120 aa7.72□□□□□ -1.17
SKA1-201ENST00000285116 ID1P41134 155 aa7.72□□□□□ -1.17
SKA1-201ENST00000285116 ZNRF2Q8NHG8 242 aa7.72□□□□□ -1.17
SKA1-201ENST00000285116 RHPN1-AS1Q9BWJ2 59 aa7.72□□□□□ -1.17
SKA1-201ENST00000285116 EIF4EBP3O60516 100 aaPredicted RBP7.72□□□□□ -1.17
SKA1-201ENST00000285116 IGHV4-39P01824 125 aa7.72□□□□□ -1.17
SKA1-201ENST00000285116 RHOHQ15669 191 aa7.72□□□□□ -1.17
SKA1-201ENST00000285116 MUC4Q99102 2169 aa7.72□□□□□ -1.17
SKA1-201ENST00000285116 TRBV10-2A0A0K0K1G8 114 aa7.72□□□□□ -1.17
SKA1-201ENST00000285116 TMEM89A2RUT3 159 aa7.72□□□□□ -1.17
SKA1-201ENST00000285116 MRPL23Q16540 153 aaKnown RBP7.72□□□□□ -1.17
SKA1-201ENST00000285116 NSUN5P1Q3KNT7 163 aa7.72□□□□□ -1.17
SKA1-201ENST00000285116 SUMO4Q6EEV6 95 aa7.72□□□□□ -1.17
SKA1-201ENST00000285116 C15orf53Q8NAA6 179 aa7.72□□□□□ -1.17
SKA1-201ENST00000285116 DCANP1Q8TF63 244 aa7.72□□□□□ -1.17
SKA1-201ENST00000285116 EDA2RQ9HAV5 297 aa7.72□□□□□ -1.17
SKA1-201ENST00000285116 LEPROTO15243 131 aa7.71□□□□□ -1.18
SKA1-201ENST00000285116 H3BMM0 161 aa7.71□□□□□ -1.18
SKA1-201ENST00000285116 H7C2G1 150 aa7.71□□□□□ -1.18
SKA1-201ENST00000285116 RPL39P62891 51 aaKnown RBP7.71□□□□□ -1.18
SKA1-201ENST00000285116 HERV-K104P63124 156 aa7.71□□□□□ -1.18
SKA1-201ENST00000285116 Q1RN00 199 aa7.71□□□□□ -1.18
SKA1-201ENST00000285116 SMIM20Q8N5G0 67 aa7.71□□□□□ -1.18
SKA1-201ENST00000285116 UBE2WQ96B02 151 aa7.71□□□□□ -1.18
SKA1-201ENST00000285116 TRAV2A0A0B4J234 112 aa7.7□□□□□ -1.18
SKA1-201ENST00000285116 TRBV30A0A0K0K1B3 111 aa7.7□□□□□ -1.18
SKA1-201ENST00000285116 SHISA2Q6UWI4 295 aa7.7□□□□□ -1.18
SKA1-201ENST00000285116 FAM159AQ6UWV7 190 aa7.7□□□□□ -1.18
SKA1-201ENST00000285116 MUSTN1Q8IVN3 82 aa7.7□□□□□ -1.18
SKA1-201ENST00000285116 PIMREGQ9BSJ6 248 aa7.7□□□□□ -1.18
SKA1-201ENST00000285116 TEX49A0A1B0GTD5 131 aa7.7□□□□□ -1.18
SKA1-201ENST00000285116 ZNF256Q9Y2P7 627 aaPredicted RBP7.7□□□□□ -1.18
SKA1-201ENST00000285116 TMEM223A0PJW6 202 aa7.69□□□□□ -1.18
SKA1-201ENST00000285116 C10orf105Q8TEF2 133 aa7.69□□□□□ -1.18
SKA1-201ENST00000285116 IGHV3-16A0A0C4DH30 117 aa7.69□□□□□ -1.18
SKA1-201ENST00000285116 A0A0J9YX75 114 aa7.69□□□□□ -1.18
SKA1-201ENST00000285116 F6UB75 175 aa7.69□□□□□ -1.18
SKA1-201ENST00000285116 LINC00527Q9UJ94 153 aa7.69□□□□□ -1.18
SKA1-201ENST00000285116 SDHAF1A6NFY7 115 aa7.68□□□□□ -1.18
SKA1-201ENST00000285116 ELANEP08246 267 aa7.68□□□□□ -1.18
SKA1-201ENST00000285116 MDFICQ9P1T7 246 aa7.68□□□□□ -1.18
SKA1-201ENST00000285116 SORL1Q92673 2214 aa7.68□□□□□ -1.18
SKA1-201ENST00000285116 M0R2P5 195 aa7.68□□□□□ -1.18
SKA1-201ENST00000285116 DUX5Q96PT3 197 aa7.68□□□□□ -1.18
SKA1-201ENST00000285116 M0QY20 66 aa7.68□□□□□ -1.18
SKA1-201ENST00000285116 C2orf82Q6UX34 121 aa7.68□□□□□ -1.18
SKA1-201ENST00000285116 H3BT86 120 aa7.67□□□□□ -1.18
SKA1-201ENST00000285116 H3BUX3 64 aa7.67□□□□□ -1.18
SKA1-201ENST00000285116 DEFB1P60022 68 aa7.67□□□□□ -1.18
SKA1-201ENST00000285116 IGHV4-61A0A0C4DH41 118 aa7.67□□□□□ -1.18
SKA1-201ENST00000285116 FAM240AA0A1B0GVK7 77 aa7.67□□□□□ -1.18
SKA1-201ENST00000285116 TRIAP1O43715 76 aa7.67□□□□□ -1.18
SKA1-201ENST00000285116 IGHV4-38-2P0DP08 117 aa7.67□□□□□ -1.18
SKA1-201ENST00000285116 PSMB8P28062 276 aa7.67□□□□□ -1.18
SKA1-201ENST00000285116 MEIG1Q5JSS6 88 aa7.67□□□□□ -1.18
SKA1-201ENST00000285116 BRD3OSQ6XYD6 125 aa7.67□□□□□ -1.18
SKA1-201ENST00000285116 RPL11P62913 178 aaKnown RBP7.66□□□□□ -1.18
SKA1-201ENST00000285116 BEX4Q9NWD9 120 aaPredicted RBP7.66□□□□□ -1.18
SKA1-201ENST00000285116 IGHV3-11P01762 117 aa7.66□□□□□ -1.18
SKA1-201ENST00000285116 ZNF22P17026 224 aaPredicted RBP7.66□□□□□ -1.18
SKA1-201ENST00000285116 DEFB104AQ8WTQ1 72 aa7.66□□□□□ -1.18
SKA1-201ENST00000285116 A0A0J9YXY3 114 aa7.65□□□□□ -1.18
SKA1-201ENST00000285116 F5H697 171 aa7.65□□□□□ -1.18
SKA1-201ENST00000285116 H7C423 109 aa7.65□□□□□ -1.18
SKA1-201ENST00000285116 K7EQG2 157 aa7.65□□□□□ -1.18
SKA1-201ENST00000285116 COX6CP09669 75 aa7.65□□□□□ -1.18
SKA1-201ENST00000285116 PIK3CD-AS1Q5SR53 167 aa7.65□□□□□ -1.18
SKA1-201ENST00000285116 TMEM126AQ9H061 195 aa7.65□□□□□ -1.18
SKA1-201ENST00000285116 PYGO1Q9Y3Y4 419 aa7.65□□□□□ -1.18
SKA1-201ENST00000285116 AKAP9Q99996 3911 aa7.65□□□□□ -1.18
SKA1-201ENST00000285116 DEFB121Q5J5C9 76 aa7.65□□□□□ -1.19
SKA1-201ENST00000285116 ICOSQ9Y6W8 199 aa7.65□□□□□ -1.19
SKA1-201ENST00000285116 TRBV7-7A0A0K0K1E9 115 aa7.64□□□□□ -1.19
SKA1-201ENST00000285116 A8MTW9 85 aa7.64□□□□□ -1.19
SKA1-201ENST00000285116 MSMBP08118 114 aa7.64□□□□□ -1.19
SKA1-201ENST00000285116 ATP5J2P56134 94 aa7.64□□□□□ -1.19
SKA1-201ENST00000285116 BLCAPP62952 87 aa7.64□□□□□ -1.19
SKA1-201ENST00000285116 C20orf203Q8NBC4 194 aa7.64□□□□□ -1.19
SKA1-201ENST00000285116 JPT2Q9H910 190 aa7.64□□□□□ -1.19
SKA1-201ENST00000285116 IGHV3-64A0A075B6Q5 118 aa7.64□□□□□ -1.19
SKA1-201ENST00000285116 IGHV1OR15-1A0A075B7D0 117 aa7.64□□□□□ -1.19
SKA1-201ENST00000285116 A0A087WWL8 130 aa7.64□□□□□ -1.19
SKA1-201ENST00000285116 TRAV12-3A0A0B4J271 114 aa7.64□□□□□ -1.19
SKA1-201ENST00000285116 SNRPD3P62318 126 aaKnown RBP7.64□□□□□ -1.19
SKA1-201ENST00000285116 ZNF56Q15929 161 aa7.64□□□□□ -1.19
SKA1-201ENST00000285116 LY6EQ16553 131 aa7.64□□□□□ -1.19
SKA1-201ENST00000285116 I3L3M4 83 aa7.63□□□□□ -1.19
SKA1-201ENST00000285116 OPRPNQ99935 248 aaPredicted RBP7.63□□□□□ -1.19
SKA1-201ENST00000285116 TNFRSF18Q9Y5U5 241 aa7.63□□□□□ -1.19
SKA1-201ENST00000285116 TENM1Q9UKZ4 2725 aa7.63□□□□□ -1.19
SKA1-201ENST00000285116 TRGV11A0A075B6L2 103 aa7.63□□□□□ -1.19
SKA1-201ENST00000285116 SMR3AQ99954 134 aa7.63□□□□□ -1.19
SKA1-201ENST00000285116 LITAFQ99732 161 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms