RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 KNCNA6PVL3 124 aa17.41■□□□□ 0.38
RETREG2-201ENST00000273048 MRPS36P82909 103 aaKnown RBP17.41■□□□□ 0.38
RETREG2-201ENST00000273048 TRAV4A0A0B4J268 109 aa17.41■□□□□ 0.38
RETREG2-201ENST00000273048 TRBV30A0A0K0K1B3 111 aa17.4■□□□□ 0.38
RETREG2-201ENST00000273048 MSMBP08118 114 aa17.4■□□□□ 0.38
RETREG2-201ENST00000273048 CCL19Q99731 98 aa17.4■□□□□ 0.38
RETREG2-201ENST00000273048 NDUFA12Q9UI09 145 aa17.4■□□□□ 0.38
RETREG2-201ENST00000273048 IGHV4-59P01825 116 aa17.39■□□□□ 0.37
RETREG2-201ENST00000273048 TRGV11A0A075B6L2 103 aa17.39■□□□□ 0.37
RETREG2-201ENST00000273048 PYGO1Q9Y3Y4 419 aa17.39■□□□□ 0.37
RETREG2-201ENST00000273048 IGHV1-58A0A0C4DH39 117 aa17.38■□□□□ 0.37
RETREG2-201ENST00000273048 TRBV10-2A0A0K0K1G8 114 aa17.38■□□□□ 0.37
RETREG2-201ENST00000273048 ICOSQ9Y6W8 199 aa17.38■□□□□ 0.37
RETREG2-201ENST00000273048 SNCGO76070 127 aa17.37■□□□□ 0.37
RETREG2-201ENST00000273048 ATP5J2P56134 94 aa17.36■□□□□ 0.37
RETREG2-201ENST00000273048 Q6ZSN1 163 aa17.36■□□□□ 0.37
RETREG2-201ENST00000273048 TNFRSF18Q9Y5U5 241 aa17.36■□□□□ 0.37
RETREG2-201ENST00000273048 NHLRC4P0CG21 123 aaPredicted RBP17.36■□□□□ 0.37
RETREG2-201ENST00000273048 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.35■□□□□ 0.37
RETREG2-201ENST00000273048 IGKV2-29A2NJV5 120 aaPredicted RBP17.35■□□□□ 0.37
RETREG2-201ENST00000273048 GAGE2BQ13066 116 aa17.35■□□□□ 0.37
RETREG2-201ENST00000273048 GAGE2EQ4V326 116 aa17.35■□□□□ 0.37
RETREG2-201ENST00000273048 CLEC2BQ92478 149 aa17.35■□□□□ 0.37
RETREG2-201ENST00000273048 GAGE2DQ9UEU5 116 aa17.35■□□□□ 0.37
RETREG2-201ENST00000273048 C2orf82Q6UX34 121 aa17.35■□□□□ 0.37
RETREG2-201ENST00000273048 VSIG2Q96IQ7 327 aa17.35■□□□□ 0.37
RETREG2-201ENST00000273048 NACAE9PAV3 2078 aa17.34■□□□□ 0.37
RETREG2-201ENST00000273048 TRAV8-4A0A0B4J246 113 aa17.34■□□□□ 0.37
RETREG2-201ENST00000273048 H3BMM0 161 aa17.34■□□□□ 0.37
RETREG2-201ENST00000273048 UBE2WQ96B02 151 aa17.34■□□□□ 0.37
RETREG2-201ENST00000273048 USP9XQ93008 2570 aaPredicted RBP17.34■□□□□ 0.37
RETREG2-201ENST00000273048 H7C423 109 aa17.34■□□□□ 0.37
RETREG2-201ENST00000273048 RPL13AP40429 203 aaKnown RBP17.34■□□□□ 0.37
RETREG2-201ENST00000273048 MIAQ16674 131 aa17.34■□□□□ 0.37
RETREG2-201ENST00000273048 DAND5Q8N907 189 aa17.34■□□□□ 0.37
RETREG2-201ENST00000273048 SPANXDQ9BXN6 97 aa17.34■□□□□ 0.37
RETREG2-201ENST00000273048 SPANXCQ9NY87 97 aa17.34■□□□□ 0.37
RETREG2-201ENST00000273048 DEFB112Q30KQ8 113 aa17.33■□□□□ 0.36
RETREG2-201ENST00000273048 IGSF10Q6WRI0 2623 aa17.33■□□□□ 0.36
RETREG2-201ENST00000273048 CHCHD7Q9BUK0 85 aa17.32■□□□□ 0.36
RETREG2-201ENST00000273048 IGHV3-38A0A0C4DH36 116 aa17.31■□□□□ 0.36
RETREG2-201ENST00000273048 UBE2D4Q9Y2X8 147 aa17.31■□□□□ 0.36
RETREG2-201ENST00000273048 SS18L2Q9UHA2 77 aa17.31■□□□□ 0.36
RETREG2-201ENST00000273048 TINCRA0A1B0GVN0 87 aa17.3■□□□□ 0.36
RETREG2-201ENST00000273048 HOXD3P31249 432 aaPredicted RBP17.3■□□□□ 0.36
RETREG2-201ENST00000273048 LINC01600Q96MT4 127 aa17.3■□□□□ 0.36
RETREG2-201ENST00000273048 NDUFV3P56181 108 aaKnown RBP17.29■□□□□ 0.36
RETREG2-201ENST00000273048 LINC00467Q9BRT7 94 aa17.29■□□□□ 0.36
RETREG2-201ENST00000273048 EDA2RQ9HAV5 297 aa17.29■□□□□ 0.36
RETREG2-201ENST00000273048 C15orf53Q8NAA6 179 aa17.29■□□□□ 0.36
RETREG2-201ENST00000273048 DUX3Q96PT4 197 aa17.29■□□□□ 0.36
RETREG2-201ENST00000273048 DEFB131AP59861 70 aa17.28■□□□□ 0.36
RETREG2-201ENST00000273048 B5MCH6 92 aa17.28■□□□□ 0.36
RETREG2-201ENST00000273048 TMEM61Q8N0U2 210 aa17.28■□□□□ 0.36
RETREG2-201ENST00000273048 NRGNQ92686 78 aa17.28■□□□□ 0.36
RETREG2-201ENST00000273048 GAGE5Q13069 117 aa17.27■□□□□ 0.36
RETREG2-201ENST00000273048 GAGE6Q13070 117 aa17.27■□□□□ 0.36
RETREG2-201ENST00000273048 CACNA1AO00555 2505 aa17.27■□□□□ 0.36
RETREG2-201ENST00000273048 ZANQ9Y493 2812 aa17.27■□□□□ 0.36
RETREG2-201ENST00000273048 RBMY1BA6NDE4 496 aaKnown RBP17.27■□□□□ 0.36
RETREG2-201ENST00000273048 RBMY1EA6NEQ0 496 aaKnown RBP17.27■□□□□ 0.36
RETREG2-201ENST00000273048 COX6CP09669 75 aa17.27■□□□□ 0.36
RETREG2-201ENST00000273048 RBMY1DP0C7P1 496 aaKnown RBP17.27■□□□□ 0.36
RETREG2-201ENST00000273048 RNF152Q8N8N0 203 aa17.27■□□□□ 0.36
RETREG2-201ENST00000273048 DOPEY1Q5JWR5 2465 aa17.26■□□□□ 0.35
RETREG2-201ENST00000273048 SPANXA1Q9NS26 97 aa17.26■□□□□ 0.35
RETREG2-201ENST00000273048 CDKN2A-AS1Q9UH64 79 aa17.26■□□□□ 0.35
RETREG2-201ENST00000273048 B4DSR2 109 aa17.25■□□□□ 0.35
RETREG2-201ENST00000273048 TTC32Q5I0X7 151 aa17.25■□□□□ 0.35
RETREG2-201ENST00000273048 DEFB136Q30KP8 78 aa17.24■□□□□ 0.35
RETREG2-201ENST00000273048 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.24■□□□□ 0.35
RETREG2-201ENST00000273048 MYO18BQ8IUG5 2567 aa17.23■□□□□ 0.35
RETREG2-201ENST00000273048 LST1O00453 97 aa17.23■□□□□ 0.35
RETREG2-201ENST00000273048 IFITM1P13164 125 aa17.23■□□□□ 0.35
RETREG2-201ENST00000273048 H3BT86 120 aa17.22■□□□□ 0.35
RETREG2-201ENST00000273048 C18orf65Q6ZTR6 163 aa17.22■□□□□ 0.35
RETREG2-201ENST00000273048 CCDC179H3BU77 68 aa17.22■□□□□ 0.35
RETREG2-201ENST00000273048 SLURP1P55000 103 aa17.22■□□□□ 0.35
RETREG2-201ENST00000273048 USP9YO00507 2555 aaPredicted RBP17.21■□□□□ 0.35
RETREG2-201ENST00000273048 TMEM89A2RUT3 159 aa17.21■□□□□ 0.35
RETREG2-201ENST00000273048 TMEM101Q96IK0 257 aa17.21■□□□□ 0.35
RETREG2-201ENST00000273048 YAE1D1Q9NRH1 226 aa17.21■□□□□ 0.35
RETREG2-201ENST00000273048 A0A0U1RRA0 63 aa17.2■□□□□ 0.34
RETREG2-201ENST00000273048 COX6A2Q02221 97 aa17.2■□□□□ 0.34
RETREG2-201ENST00000273048 ZNF625Q96I27 306 aaPredicted RBP17.2■□□□□ 0.34
RETREG2-201ENST00000273048 CUBNO60494 3623 aa17.2■□□□□ 0.34
RETREG2-201ENST00000273048 CENPEQ02224 2701 aa17.2■□□□□ 0.34
RETREG2-201ENST00000273048 ZNF415Q09FC8 603 aa17.19■□□□□ 0.34
RETREG2-201ENST00000273048 CITED2Q99967 270 aaPredicted RBP17.19■□□□□ 0.34
RETREG2-201ENST00000273048 MAPK1IP1LQ8NDC0 245 aa17.19■□□□□ 0.34
RETREG2-201ENST00000273048 POLQO75417 2590 aa17.19■□□□□ 0.34
RETREG2-201ENST00000273048 Q6Q795 121 aa17.18■□□□□ 0.34
RETREG2-201ENST00000273048 MXRA5Q9NR99 2828 aa17.17■□□□□ 0.34
RETREG2-201ENST00000273048 SVIPQ8NHG7 77 aa17.17■□□□□ 0.34
RETREG2-201ENST00000273048 LINC01587Q99440 93 aa17.17■□□□□ 0.34
RETREG2-201ENST00000273048 FBN2P35556 2912 aa17.17■□□□□ 0.34
RETREG2-201ENST00000273048 NDUFA1O15239 70 aa17.16■□□□□ 0.34
RETREG2-201ENST00000273048 TIMM17BO60830 172 aa17.16■□□□□ 0.34
RETREG2-201ENST00000273048 UBE2E2Q96LR5 201 aa17.16■□□□□ 0.34
RETREG2-201ENST00000273048 ACACBO00763 2458 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 692.8 ms