RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 C11orf52Q96A22 123 aa5.65□□□□□ -1.5
TPM3-201ENST00000271850 TRBV20OR9-2A0A075B6H5 130 aa5.64□□□□□ -1.51
TPM3-201ENST00000271850 IGHV1-24A0A0C4DH33 117 aa5.64□□□□□ -1.51
TPM3-201ENST00000271850 S100A9P06702 114 aaKnown RBP5.64□□□□□ -1.51
TPM3-201ENST00000271850 NKX2-5P52952 324 aaPredicted RBP5.64□□□□□ -1.51
TPM3-201ENST00000271850 ZNF345Q14585 488 aa5.64□□□□□ -1.51
TPM3-201ENST00000271850 Q6ZRU5 148 aa5.64□□□□□ -1.51
TPM3-201ENST00000271850 TMUB2Q71RG4 321 aa5.64□□□□□ -1.51
TPM3-201ENST00000271850 AP1S3Q96PC3 154 aa5.64□□□□□ -1.51
TPM3-201ENST00000271850 A0A1B0GUV1 79 aa5.63□□□□□ -1.51
TPM3-201ENST00000271850 hDV102S1A0JD36 115 aa5.63□□□□□ -1.51
TPM3-201ENST00000271850 PHOX2AO14813 284 aa5.63□□□□□ -1.51
TPM3-201ENST00000271850 MGPP08493 103 aa5.63□□□□□ -1.51
TPM3-201ENST00000271850 RAB5CP51148 216 aa5.63□□□□□ -1.51
TPM3-201ENST00000271850 PKIAP61925 76 aa5.63□□□□□ -1.51
TPM3-201ENST00000271850 TMEM97Q5BJF2 176 aa5.63□□□□□ -1.51
TPM3-201ENST00000271850 CENPWQ5EE01 88 aa5.63□□□□□ -1.51
TPM3-201ENST00000271850 CLRN3Q8NCR9 226 aa5.63□□□□□ -1.51
TPM3-201ENST00000271850 PLAC8Q9NZF1 115 aa5.63□□□□□ -1.51
TPM3-201ENST00000271850 LPAP08519 4548 aa5.62□□□□□ -1.51
TPM3-201ENST00000271850 RAB19A4D1S5 217 aa5.62□□□□□ -1.51
TPM3-201ENST00000271850 FER1L6-AS1Q8NA97 138 aa5.62□□□□□ -1.51
TPM3-201ENST00000271850 KRTAP3-1Q9BYR8 98 aa5.62□□□□□ -1.51
TPM3-201ENST00000271850 IGHV3-64A0A075B6Q5 118 aa5.61□□□□□ -1.51
TPM3-201ENST00000271850 TRAV8-4A0A0B4J246 113 aa5.61□□□□□ -1.51
TPM3-201ENST00000271850 UMAD1C9J7I0 102 aa5.61□□□□□ -1.51
TPM3-201ENST00000271850 BCL2L11O43521 198 aa5.61□□□□□ -1.51
TPM3-201ENST00000271850 PFDN1O60925 122 aa5.61□□□□□ -1.51
TPM3-201ENST00000271850 P01737 135 aa5.61□□□□□ -1.51
TPM3-201ENST00000271850 SMIM17P0DL12 118 aa5.61□□□□□ -1.51
TPM3-201ENST00000271850 RASL11AQ6T310 242 aa5.61□□□□□ -1.51
TPM3-201ENST00000271850 OR2D3Q8NGH3 330 aa5.61□□□□□ -1.51
TPM3-201ENST00000271850 PRSS3P2Q8NHM4 247 aa5.61□□□□□ -1.51
TPM3-201ENST00000271850 PGLYRP4Q96LB8 373 aa5.61□□□□□ -1.51
TPM3-201ENST00000271850 TMEM243Q9BU79 118 aa5.61□□□□□ -1.51
TPM3-201ENST00000271850 TPPP3Q9BW30 176 aa5.61□□□□□ -1.51
TPM3-201ENST00000271850 BATF3Q9NR55 127 aa5.61□□□□□ -1.51
TPM3-201ENST00000271850 TRAV26-2A0A0B4J265 109 aa5.6□□□□□ -1.51
TPM3-201ENST00000271850 A0A0D9SG52 128 aa5.6□□□□□ -1.51
TPM3-201ENST00000271850 HMSDA8MTL9 139 aa5.6□□□□□ -1.51
TPM3-201ENST00000271850 FOXA3P55318 350 aaPredicted RBP5.6□□□□□ -1.51
TPM3-201ENST00000271850 COX6A2Q02221 97 aa5.6□□□□□ -1.51
TPM3-201ENST00000271850 HIGD2BQ4VC39 106 aa5.6□□□□□ -1.51
TPM3-201ENST00000271850 LYZL1Q6UWQ5 148 aa5.6□□□□□ -1.51
TPM3-201ENST00000271850 Q6ZNX1 250 aa5.6□□□□□ -1.51
TPM3-201ENST00000271850 GATD1Q8NB37 220 aa5.6□□□□□ -1.51
TPM3-201ENST00000271850 GNG13Q9P2W3 67 aa5.6□□□□□ -1.51
TPM3-201ENST00000271850 TRAV1-1A0A0B4J248 108 aa5.59□□□□□ -1.51
TPM3-201ENST00000271850 GAGE12HA6NDE8 117 aa5.59□□□□□ -1.51
TPM3-201ENST00000271850 NTF3P20783 257 aa5.59□□□□□ -1.51
TPM3-201ENST00000271850 CTRLP40313 264 aa5.59□□□□□ -1.51
TPM3-201ENST00000271850 CACNG7P62955 275 aa5.59□□□□□ -1.51
TPM3-201ENST00000271850 PRR3P79522 188 aaKnown RBP5.59□□□□□ -1.51
TPM3-201ENST00000271850 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.59□□□□□ -1.51
TPM3-201ENST00000271850 RPL39LQ96EH5 51 aaKnown RBP5.59□□□□□ -1.51
TPM3-201ENST00000271850 RNF185Q96GF1 192 aa5.59□□□□□ -1.51
TPM3-201ENST00000271850 CNFNQ9BYD5 112 aa5.59□□□□□ -1.51
TPM3-201ENST00000271850 NIT2Q9NQR4 276 aa5.59□□□□□ -1.51
TPM3-201ENST00000271850 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.58□□□□□ -1.52
TPM3-201ENST00000271850 A0A096LNI7 61 aa5.58□□□□□ -1.52
TPM3-201ENST00000271850 IGKV2-29A2NJV5 120 aaPredicted RBP5.58□□□□□ -1.52
TPM3-201ENST00000271850 H7C1H1 209 aa5.58□□□□□ -1.52
TPM3-201ENST00000271850 K7EN84 100 aa5.58□□□□□ -1.52
TPM3-201ENST00000271850 GAS8-AS1O95177 125 aa5.58□□□□□ -1.52
TPM3-201ENST00000271850 FOXI1Q12951 378 aa5.58□□□□□ -1.52
TPM3-201ENST00000271850 RGS21Q2M5E4 152 aa5.58□□□□□ -1.52
TPM3-201ENST00000271850 C9orf62Q8N4C0 152 aa5.58□□□□□ -1.52
TPM3-201ENST00000271850 LINC01600Q96MT4 127 aa5.58□□□□□ -1.52
TPM3-201ENST00000271850 DPH3P1Q9H4G8 78 aa5.58□□□□□ -1.52
TPM3-201ENST00000271850 MANBALQ9NQG1 85 aa5.58□□□□□ -1.52
TPM3-201ENST00000271850 GVQW2A0A096LPI5 108 aaPredicted RBP5.57□□□□□ -1.52
TPM3-201ENST00000271850 IGKV2-24A0A0C4DH68 120 aa5.57□□□□□ -1.52
TPM3-201ENST00000271850 IGKV3OR2-268A0A0C4DH90 116 aa5.57□□□□□ -1.52
TPM3-201ENST00000271850 FAM231BA6NCW3 169 aa5.57□□□□□ -1.52
TPM3-201ENST00000271850 NDUFS6O75380 124 aaKnown RBP5.57□□□□□ -1.52
TPM3-201ENST00000271850 AMTP48728 403 aa5.57□□□□□ -1.52
TPM3-201ENST00000271850 KRTAP10-8P60410 259 aa5.57□□□□□ -1.52
TPM3-201ENST00000271850 RPS20P60866 119 aaKnown RBP5.57□□□□□ -1.52
TPM3-201ENST00000271850 NUDT10Q8NFP7 164 aa5.57□□□□□ -1.52
TPM3-201ENST00000271850 GTSF1Q8WW33 167 aa5.57□□□□□ -1.52
TPM3-201ENST00000271850 CHCHD10Q8WYQ3 142 aaPredicted RBP5.57□□□□□ -1.52
TPM3-201ENST00000271850 LINC00526Q96FQ7 95 aa5.57□□□□□ -1.52
TPM3-201ENST00000271850 NUDT11Q96G61 164 aa5.57□□□□□ -1.52
TPM3-201ENST00000271850 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.56□□□□□ -1.52
TPM3-201ENST00000271850 KANTRA0A1W2PQU2 76 aa5.56□□□□□ -1.52
TPM3-201ENST00000271850 F2Z2F3 143 aa5.56□□□□□ -1.52
TPM3-201ENST00000271850 TRGC1P0CF51 173 aa5.56□□□□□ -1.52
TPM3-201ENST00000271850 RPS10P46783 165 aaKnown RBP5.56□□□□□ -1.52
TPM3-201ENST00000271850 GNG4P50150 75 aa5.56□□□□□ -1.52
TPM3-201ENST00000271850 SULT1A2P50226 295 aa5.56□□□□□ -1.52
TPM3-201ENST00000271850 MEF2BQ02080 365 aaPredicted RBP5.56□□□□□ -1.52
TPM3-201ENST00000271850 COTL1Q14019 142 aa5.56□□□□□ -1.52
TPM3-201ENST00000271850 MAJINQ3KP22 176 aa5.56□□□□□ -1.52
TPM3-201ENST00000271850 SMIM12Q96EX1 92 aa5.56□□□□□ -1.52
TPM3-201ENST00000271850 RNASE7Q9H1E1 156 aaKnown RBP5.56□□□□□ -1.52
TPM3-201ENST00000271850 AP5S1Q9NUS5 200 aa5.56□□□□□ -1.52
TPM3-201ENST00000271850 UBE2L6O14933 153 aa5.55□□□□□ -1.52
TPM3-201ENST00000271850 IFNA1P01562 189 aa5.55□□□□□ -1.52
TPM3-201ENST00000271850 WDR73Q6P4I2 378 aa5.55□□□□□ -1.52
TPM3-201ENST00000271850 STPG4Q8N801 248 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms