RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 TMEM86BQ8N661 226 aa9.42□□□□□ -0.9
CPSF6-201ENST00000266679 NACAE9PAV3 2078 aa9.42□□□□□ -0.9
CPSF6-201ENST00000266679 TSPEAR-AS2P59090 65 aa9.41□□□□□ -0.9
CPSF6-201ENST00000266679 C20orf203Q8NBC4 194 aa9.41□□□□□ -0.9
CPSF6-201ENST00000266679 SPATA3Q8NHX4 192 aa9.41□□□□□ -0.9
CPSF6-201ENST00000266679 RAX2Q96IS3 184 aa9.41□□□□□ -0.9
CPSF6-201ENST00000266679 M0R2P5 195 aa9.41□□□□□ -0.9
CPSF6-201ENST00000266679 ZNF479Q96JC4 524 aa9.41□□□□□ -0.9
CPSF6-201ENST00000266679 LINC01587Q99440 93 aa9.41□□□□□ -0.9
CPSF6-201ENST00000266679 SAP30O75446 220 aa9.4□□□□□ -0.9
CPSF6-201ENST00000266679 SPAG8Q99932 426 aaPredicted RBP9.4□□□□□ -0.91
CPSF6-201ENST00000266679 ESM1Q9NQ30 184 aa9.4□□□□□ -0.91
CPSF6-201ENST00000266679 A8MWV9 139 aa9.39□□□□□ -0.91
CPSF6-201ENST00000266679 INSP01308 110 aa9.39□□□□□ -0.91
CPSF6-201ENST00000266679 CD28P10747 220 aa9.39□□□□□ -0.91
CPSF6-201ENST00000266679 MRPL16Q9NX20 251 aaKnown RBP9.39□□□□□ -0.91
CPSF6-201ENST00000266679 IGLV4-3A0A075B6K6 122 aa9.39□□□□□ -0.91
CPSF6-201ENST00000266679 SRSF9Q13242 221 aaKnown RBP eCLIP9.39□□□□□ -0.91
CPSF6-201ENST00000266679 Q6ZSN1 163 aa9.39□□□□□ -0.91
CPSF6-201ENST00000266679 TNFRSF18Q9Y5U5 241 aa9.39□□□□□ -0.91
CPSF6-201ENST00000266679 RRN3P1Q2M238 152 aa9.38□□□□□ -0.91
CPSF6-201ENST00000266679 NFE4Q86UQ8 179 aa9.38□□□□□ -0.91
CPSF6-201ENST00000266679 VPS25Q9BRG1 176 aa9.38□□□□□ -0.91
CPSF6-201ENST00000266679 EDA2RQ9HAV5 297 aa9.38□□□□□ -0.91
CPSF6-201ENST00000266679 Q9UF83 564 aa9.38□□□□□ -0.91
CPSF6-201ENST00000266679 A0A1B0GWB2 263 aa9.37□□□□□ -0.91
CPSF6-201ENST00000266679 K7ERU9 68 aa9.37□□□□□ -0.91
CPSF6-201ENST00000266679 ODF3L2Q3SX64 289 aa9.37□□□□□ -0.91
CPSF6-201ENST00000266679 CFAP126Q5VTH2 177 aa9.37□□□□□ -0.91
CPSF6-201ENST00000266679 C11orf72Q8NBR9 251 aa9.37□□□□□ -0.91
CPSF6-201ENST00000266679 XCL2Q9UBD3 114 aa9.37□□□□□ -0.91
CPSF6-201ENST00000266679 IGHV3-64A0A075B6Q5 118 aa9.37□□□□□ -0.91
CPSF6-201ENST00000266679 A0A0J9YXV3 536 aa9.37□□□□□ -0.91
CPSF6-201ENST00000266679 A0A0J9YY99 117 aa9.37□□□□□ -0.91
CPSF6-201ENST00000266679 LGALS3P17931 250 aaKnown RBP9.37□□□□□ -0.91
CPSF6-201ENST00000266679 TEX29Q8N6K0 151 aa9.37□□□□□ -0.91
CPSF6-201ENST00000266679 VCX2Q9H322 139 aa9.37□□□□□ -0.91
CPSF6-201ENST00000266679 J3QQQ9 107 aa9.36□□□□□ -0.91
CPSF6-201ENST00000266679 ZNF22P17026 224 aaPredicted RBP9.36□□□□□ -0.91
CPSF6-201ENST00000266679 C21orf62-AS1Q17RA5 79 aa9.36□□□□□ -0.91
CPSF6-201ENST00000266679 IGHV3OR16-12A0A075B7B8 117 aa9.36□□□□□ -0.91
CPSF6-201ENST00000266679 TMEM238LA0A1B0GVL6 79 aa9.36□□□□□ -0.91
CPSF6-201ENST00000266679 TMEM223A0PJW6 202 aa9.36□□□□□ -0.91
CPSF6-201ENST00000266679 A6NJY4 79 aa9.36□□□□□ -0.91
CPSF6-201ENST00000266679 CCL24O00175 119 aa9.36□□□□□ -0.91
CPSF6-201ENST00000266679 CEMP1Q6PRD7 247 aaPredicted RBP9.36□□□□□ -0.91
CPSF6-201ENST00000266679 STHQ8IWL8 128 aa9.36□□□□□ -0.91
CPSF6-201ENST00000266679 RNASE13Q5GAN3 156 aaKnown RBP9.35□□□□□ -0.91
CPSF6-201ENST00000266679 AMELXQ99217 191 aa9.35□□□□□ -0.91
CPSF6-201ENST00000266679 LINC00467Q9BRT7 94 aa9.35□□□□□ -0.91
CPSF6-201ENST00000266679 PGPEP1Q9NXJ5 209 aa9.35□□□□□ -0.91
CPSF6-201ENST00000266679 RHODO00212 210 aa9.35□□□□□ -0.91
CPSF6-201ENST00000266679 LEPROTO15243 131 aa9.35□□□□□ -0.91
CPSF6-201ENST00000266679 AZU1P20160 251 aa9.35□□□□□ -0.91
CPSF6-201ENST00000266679 FHL3Q13643 280 aa9.35□□□□□ -0.91
CPSF6-201ENST00000266679 IGHV3-38A0A0C4DH36 116 aa9.34□□□□□ -0.91
CPSF6-201ENST00000266679 PIK3CD-AS1Q5SR53 167 aa9.34□□□□□ -0.91
CPSF6-201ENST00000266679 PTH2Q96A98 100 aa9.34□□□□□ -0.91
CPSF6-201ENST00000266679 CITED2Q99967 270 aaPredicted RBP9.34□□□□□ -0.91
CPSF6-201ENST00000266679 SPXQ9BT56 116 aa9.34□□□□□ -0.91
CPSF6-201ENST00000266679 TRAV25A0A0B4J276 109 aa9.33□□□□□ -0.92
CPSF6-201ENST00000266679 APOMO95445 188 aa9.33□□□□□ -0.92
CPSF6-201ENST00000266679 PCP4P48539 62 aa9.33□□□□□ -0.92
CPSF6-201ENST00000266679 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.33□□□□□ -0.92
CPSF6-201ENST00000266679 WNK1Q9H4A3 2382 aa9.33□□□□□ -0.92
CPSF6-201ENST00000266679 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.33□□□□□ -0.92
CPSF6-201ENST00000266679 IGKV2-29A2NJV5 120 aaPredicted RBP9.33□□□□□ -0.92
CPSF6-201ENST00000266679 H3BMG7 143 aa9.33□□□□□ -0.92
CPSF6-201ENST00000266679 RS1O15537 224 aa9.33□□□□□ -0.92
CPSF6-201ENST00000266679 UBE2D1P51668 147 aa9.33□□□□□ -0.92
CPSF6-201ENST00000266679 FAM104AQ969W3 186 aa9.33□□□□□ -0.92
CPSF6-201ENST00000266679 CHCHD7Q9BUK0 85 aa9.33□□□□□ -0.92
CPSF6-201ENST00000266679 SPANXB1Q9NS25 103 aaPredicted RBP9.33□□□□□ -0.92
CPSF6-201ENST00000266679 PYGO1Q9Y3Y4 419 aa9.33□□□□□ -0.92
CPSF6-201ENST00000266679 BEAN1Q3B7T3 259 aa9.32□□□□□ -0.92
CPSF6-201ENST00000266679 C1orf158Q8N1D5 194 aa9.32□□□□□ -0.92
CPSF6-201ENST00000266679 IGHV3-53P01767 116 aa9.32□□□□□ -0.92
CPSF6-201ENST00000266679 IGHV3-30P01768 117 aa9.32□□□□□ -0.92
CPSF6-201ENST00000266679 IGHV3-30-5P0DP03 117 aa9.32□□□□□ -0.92
CPSF6-201ENST00000266679 RPL24P83731 157 aaKnown RBP9.32□□□□□ -0.92
CPSF6-201ENST00000266679 MTURNQ8N3F0 131 aa9.32□□□□□ -0.92
CPSF6-201ENST00000266679 SLC25A29Q8N8R3 303 aa9.32□□□□□ -0.92
CPSF6-201ENST00000266679 PKD1L1Q8TDX9 2849 aa9.32□□□□□ -0.92
CPSF6-201ENST00000266679 TRRAPQ9Y4A5 3859 aa9.31□□□□□ -0.92
CPSF6-201ENST00000266679 TSPAN13O95857 204 aa9.31□□□□□ -0.92
CPSF6-201ENST00000266679 SFTA2Q6UW10 78 aa9.31□□□□□ -0.92
CPSF6-201ENST00000266679 CLUHP3Q96NS8 147 aa9.31□□□□□ -0.92
CPSF6-201ENST00000266679 TRGV1A0A0A0MS02 117 aa9.31□□□□□ -0.92
CPSF6-201ENST00000266679 G3V4G9 280 aa9.31□□□□□ -0.92
CPSF6-201ENST00000266679 TSSC4Q9Y5U2 329 aaPredicted RBP9.31□□□□□ -0.92
CPSF6-201ENST00000266679 COTL1Q14019 142 aa9.3□□□□□ -0.92
CPSF6-201ENST00000266679 WFDC2Q14508 124 aa9.3□□□□□ -0.92
CPSF6-201ENST00000266679 Q6ZUT4 128 aa9.3□□□□□ -0.92
CPSF6-201ENST00000266679 LINC01006Q8NI28 216 aa9.3□□□□□ -0.92
CPSF6-201ENST00000266679 DNAJC30Q96LL9 226 aa9.3□□□□□ -0.92
CPSF6-201ENST00000266679 UBE2D4Q9Y2X8 147 aa9.3□□□□□ -0.92
CPSF6-201ENST00000266679 TEX48A0A1B0GUV7 120 aa9.29□□□□□ -0.92
CPSF6-201ENST00000266679 TIMM21Q9BVV7 248 aa9.29□□□□□ -0.92
CPSF6-201ENST00000266679 MRPS36P82909 103 aaKnown RBP9.29□□□□□ -0.92
CPSF6-201ENST00000266679 NDUFA11Q86Y39 141 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms